RNA–Protein interactions for RNA: ENST00000516258.1

RNU4-71P-201, Transcript of RNA, U4 small nuclear 71, pseudogene, humanhuman

BASIC

Gene RNU4-71P, Length 113 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-71P-201ENST00000516258 PSMC3IPQ9P2W1 217 aaPredicted RBP-1.11□□□□□ -2.59
RNU4-71P-201ENST00000516258 PISDQ9UG56 409 aa-1.11□□□□□ -2.59
RNU4-71P-201ENST00000516258 RPUSD1Q9UJJ7 312 aaKnown RBP-1.11□□□□□ -2.59
RNU4-71P-201ENST00000516258 NOL7Q9UMY1 257 aaKnown RBP-1.11□□□□□ -2.59
RNU4-71P-201ENST00000516258 MRPS7Q9Y2R9 242 aaKnown RBP-1.11□□□□□ -2.59
RNU4-71P-201ENST00000516258 ASB3Q9Y575 518 aa-1.11□□□□□ -2.59
RNU4-71P-201ENST00000516258 DSCAML1Q8TD84 2053 aa-1.11□□□□□ -2.59
RNU4-71P-201ENST00000516258 UNC79Q9P2D8 2635 aa-1.11□□□□□ -2.59
RNU4-71P-201ENST00000516258 ZNF106Q9H2Y7 1883 aaKnown RBP-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 PTPRBP23467 1997 aa-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 OR5H14A6NHG9 310 aa-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 SIRPB1O00241 398 aa-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 CLOCKO15516 846 aa-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 ERI3O43414 337 aaKnown RBP-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 SMC2O95347 1197 aa-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 HSPA5P11021 654 aaKnown RBP-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 CNTFRP26992 372 aa-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 RWDD2BP57060 319 aa-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 CCDC183Q5T5S1 534 aa-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 FAM27D1Q5T7N8 215 aa-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 OLIG3Q7RTU3 272 aa-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 Q8N2B8 174 aa-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 OR11G2Q8NGC1 345 aa-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 CCDC47Q96A33 483 aaKnown RBP-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 TMEM175Q9BSA9 504 aa-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 TAPBPLQ9BX59 468 aa-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 MRPL20Q9BYC9 149 aaKnown RBP-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 BTRCQ9Y297 605 aa-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 MED12LQ86YW9 2145 aa-1.12□□□□□ -2.59
RNU4-71P-201ENST00000516258 DHRS12A0PJE2 317 aa-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 PRMT5O14744 637 aaPredicted RBP-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 SLC25A20O43772 301 aa-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 SERPINA3P01011 423 aa-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 PTHP01270 115 aa-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 ATF1P18846 271 aa-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 ELK4P28324 431 aa-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 ZNF117Q03924 483 aa-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 RELAQ04206 551 aa-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 SLC38A11Q08AI6 406 aa-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 SKP2Q13309 424 aa-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 SSX1Q16384 188 aa-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 ZNF404Q494X3 552 aa-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 AGTRAPQ6RW13 159 aa-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 FP248Q71RG6 208 aaPredicted RBP-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 SLC30A8Q8IWU4 369 aa-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 ZCCHC7Q8N3Z6 543 aaKnown RBP-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 ZNF283Q8N7M2 679 aa-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 ASB7Q9H672 318 aa-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 SNX6Q9UNH7 406 aa-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 PHLDA3Q9Y5J5 127 aa-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 DDX49Q9Y6V7 483 aaKnown RBP-1.13□□□□□ -2.59
RNU4-71P-201ENST00000516258 TRBV9A0A0B4J1U6 114 aa-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 SLC22A20A6NK97 555 aa-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 GEMIN2O14893 280 aaKnown RBP-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 ANGPT2O15123 496 aa-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 ZNF737O75373 536 aa-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 RHOCP08134 193 aa-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 GUSBP08236 651 aa-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 RAB5AP20339 215 aa-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 RPL10AP62906 217 aaKnown RBP-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 SRSF6Q13247 344 aaKnown RBP-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 TTMPQ5BVD1 217 aa-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 TMEM215Q68D42 235 aa-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 LRRC28Q86X40 367 aaPredicted RBP-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 OR8J1Q8NGP2 316 aa-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 NDNFQ8TB73 568 aa-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 ASZ1Q8WWH4 475 aa-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 RAB1CQ92928 201 aa-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 ZNF471Q9BX82 626 aaPredicted RBP-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 DBNDD1Q9H9R9 158 aa-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 RBM22Q9NW64 420 aaKnown RBP eCLIP-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 CLEC4AQ9UMR7 237 aa-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 PLEKHG2Q9H7P9 1386 aa-1.14□□□□□ -2.59
RNU4-71P-201ENST00000516258 CACNA1CQ13936 2221 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 IGHV3-15A0A0B4J1V0 119 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 H7C0C1 242 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 K7EPI3 171 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 NDUFAB1O14561 156 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 MAGEB3O15480 346 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 NDUFS5O43920 106 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 PLEKHA8P1O95397 391 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 SOX14O95416 240 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 SOD1P00441 154 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 SPAM1P38567 509 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 ACAA2P42765 397 aaKnown RBP-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 ATP5OP48047 213 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 CEBPDP49716 269 aaPredicted RBP-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 MRPL23Q16540 153 aaKnown RBP-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 CLLU1OSQ5K130 101 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 PDPK2PQ6A1A2 396 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 LAIR2Q6ISS4 152 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 SLC16A14Q7RTX9 510 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 LINC00596Q86U02 117 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 ZNF439Q8NDP4 499 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 OR2M3Q8NG83 312 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 OR9G4Q8NGQ1 327 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 ZNF426Q9BUY5 554 aa-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 ISY1Q9ULR0 285 aaKnown RBP-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 PUS1Q9Y606 427 aaKnown RBP eCLIP-1.15□□□□□ -2.59
RNU4-71P-201ENST00000516258 MUC2Q02817 5179 aa-1.15□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms