RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 MYL9P24844 172 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 NPY4RP50391 375 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 BMXP51813 675 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 FGF12P61328 243 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 ZNF146Q15072 292 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 SLC22A6Q4U2R8 563 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 C1orf100Q5SVJ3 147 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 AWAT2Q6E213 333 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 FAM166AQ6J272 317 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 Q71RC1 249 aaPredicted RBP17.47■□□□□ 0.39
NEIL3-202ENST00000513321 ZNRF1Q8ND25 227 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 Q8NFD4 153 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 TMEM186Q96B77 213 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 YAE1D1Q9NRH1 226 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 HIF1ANQ9NWT6 349 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 IL36GQ9NZH8 169 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 MALRD1Q5VYJ5 2156 aa17.46■□□□□ 0.39
NEIL3-202ENST00000513321 TRAV20A0A0B4J274 112 aa17.46■□□□□ 0.39
NEIL3-202ENST00000513321 CSTBP04080 98 aaKnown RBP17.46■□□□□ 0.39
NEIL3-202ENST00000513321 LRRC10Q5BKY1 277 aa17.46■□□□□ 0.39
NEIL3-202ENST00000513321 SPIN3Q5JUX0 258 aa17.46■□□□□ 0.39
NEIL3-202ENST00000513321 GLCCI1Q86VQ1 547 aa17.46■□□□□ 0.39
NEIL3-202ENST00000513321 FGFRL1Q8N441 504 aa17.46■□□□□ 0.39
NEIL3-202ENST00000513321 ZNF561Q8N587 486 aa17.46■□□□□ 0.39
NEIL3-202ENST00000513321 SEBOXQ9HB31 216 aaPredicted RBP17.46■□□□□ 0.39
NEIL3-202ENST00000513321 PCDHB16Q9NRJ7 776 aa17.46■□□□□ 0.39
NEIL3-202ENST00000513321 GLS2Q9UI32 602 aa17.46■□□□□ 0.39
NEIL3-202ENST00000513321 POLR3KQ9Y2Y1 108 aaPredicted RBP17.46■□□□□ 0.39
NEIL3-202ENST00000513321 PDCD5O14737 125 aa17.45■□□□□ 0.38
NEIL3-202ENST00000513321 ZNF780AO75290 641 aaPredicted RBP17.45■□□□□ 0.38
NEIL3-202ENST00000513321 HAND1O96004 215 aa17.45■□□□□ 0.38
NEIL3-202ENST00000513321 TFAP2AP05549 437 aa17.45■□□□□ 0.38
NEIL3-202ENST00000513321 CHRM2P08172 466 aa17.45■□□□□ 0.38
NEIL3-202ENST00000513321 PSMD7P51665 324 aa17.45■□□□□ 0.38
NEIL3-202ENST00000513321 DVL1P1P54792 670 aaPredicted RBP17.45■□□□□ 0.38
NEIL3-202ENST00000513321 COL10A1Q03692 680 aa17.45■□□□□ 0.38
NEIL3-202ENST00000513321 TIMM50Q3ZCQ8 353 aa17.45■□□□□ 0.38
NEIL3-202ENST00000513321 OR13F1Q8NGS4 319 aa17.45■□□□□ 0.38
NEIL3-202ENST00000513321 TBC1D15Q8TC07 691 aa17.45■□□□□ 0.38
NEIL3-202ENST00000513321 ST8SIA4Q92187 359 aa17.45■□□□□ 0.38
NEIL3-202ENST00000513321 RNF167Q9H6Y7 350 aa17.45■□□□□ 0.38
NEIL3-202ENST00000513321 MMP26Q9NRE1 261 aa17.45■□□□□ 0.38
NEIL3-202ENST00000513321 SLC25A10Q9UBX3 287 aaPredicted RBP17.45■□□□□ 0.38
NEIL3-202ENST00000513321 OR5V1Q9UGF6 321 aa17.45■□□□□ 0.38
NEIL3-202ENST00000513321 V9GY05 133 aa17.45■□□□□ 0.38
NEIL3-202ENST00000513321 TLN2Q9Y4G6 2542 aa17.45■□□□□ 0.38
NEIL3-202ENST00000513321 LOC105371242A0A075B767 164 aa17.44■□□□□ 0.38
NEIL3-202ENST00000513321 SH2D1BO14796 132 aa17.44■□□□□ 0.38
NEIL3-202ENST00000513321 SERPINA2P20848 420 aa17.44■□□□□ 0.38
NEIL3-202ENST00000513321 HTR2CP28335 458 aa17.44■□□□□ 0.38
NEIL3-202ENST00000513321 GPR176Q14439 515 aa17.44■□□□□ 0.38
NEIL3-202ENST00000513321 GDPGP1Q6ZNW5 385 aa17.44■□□□□ 0.38
NEIL3-202ENST00000513321 OSR2Q8N2R0 312 aa17.44■□□□□ 0.38
NEIL3-202ENST00000513321 TMEM185AQ8NFB2 350 aa17.44■□□□□ 0.38
NEIL3-202ENST00000513321 OR51T1Q8NGJ9 327 aa17.44■□□□□ 0.38
NEIL3-202ENST00000513321 C1orf147Q96MC9 270 aaPredicted RBP17.44■□□□□ 0.38
NEIL3-202ENST00000513321 KCTD7Q96MP8 289 aa17.44■□□□□ 0.38
NEIL3-202ENST00000513321 CENPOQ9BU64 300 aa17.44■□□□□ 0.38
NEIL3-202ENST00000513321 PLGRKTQ9HBL7 147 aa17.44■□□□□ 0.38
NEIL3-202ENST00000513321 A0A1W2PP11 408 aa17.43■□□□□ 0.38
NEIL3-202ENST00000513321 A8MV72 311 aaPredicted RBP17.43■□□□□ 0.38
NEIL3-202ENST00000513321 SLC22A1O15245 554 aa17.43■□□□□ 0.38
NEIL3-202ENST00000513321 AIREO43918 545 aa17.43■□□□□ 0.38
NEIL3-202ENST00000513321 CAPZA1P52907 286 aa17.43■□□□□ 0.38
NEIL3-202ENST00000513321 SCN1BQ07699 218 aa17.43■□□□□ 0.38
NEIL3-202ENST00000513321 CD276Q5ZPR3 534 aa17.43■□□□□ 0.38
NEIL3-202ENST00000513321 BTN2A1Q7KYR7 527 aa17.43■□□□□ 0.38
NEIL3-202ENST00000513321 OR6M1Q8NGM8 313 aa17.43■□□□□ 0.38
NEIL3-202ENST00000513321 FUNDC2Q9BWH2 189 aa17.43■□□□□ 0.38
NEIL3-202ENST00000513321 GHRLQ9UBU3 117 aa17.43■□□□□ 0.38
NEIL3-202ENST00000513321 KCNS2Q9ULS6 477 aa17.43■□□□□ 0.38
NEIL3-202ENST00000513321 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.43■□□□□ 0.383e-6■■■■□ 23.8
NEIL3-202ENST00000513321 PPIAL4CA0A0B4J2A2 164 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 SLC17A2O00624 439 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 GPR37O15354 613 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 GTF2F2P13984 249 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 NDUFB7P17568 137 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 RAB3BP20337 219 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 ALDH3B2P48448 385 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 OR10A3P58181 314 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 PAX2Q02962 417 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 PDCD1Q15116 288 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 PIGYQ3MUY2 71 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 ASCC1Q8N9N2 400 aaKnown RBP17.42■□□□□ 0.38
NEIL3-202ENST00000513321 RAB40AQ8WXH6 277 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 SLC25A28Q96A46 364 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 ST3GAL6Q9Y274 331 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 ARHGAP32A7KAX9 2087 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 C22orf46C9J442 243 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 K7N7A8 449 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 DEGS1O15121 323 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 ZNF737O75373 536 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 ECDO95905 644 aaPredicted RBP17.42■□□□□ 0.38
NEIL3-202ENST00000513321 OR2H2O95918 312 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 TK1P04183 234 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 UBBP0CG47 229 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 CAV3P56539 151 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 DCAF12L2Q5VW00 463 aa17.42■□□□□ 0.38
NEIL3-202ENST00000513321 FAHD2BQ6P2I3 314 aaPredicted RBP17.42■□□□□ 0.38
NEIL3-202ENST00000513321 Q6P435 159 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms