RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 NEK6Q9HC98 313 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 ZNRD1Q9P1U0 126 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 DIMT1Q9UNQ2 313 aaKnown RBP13.47□□□□□ -0.25
DDX41-213ENST00000512027 FAM96BQ9Y3D0 163 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 SIRPB1O00241 398 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 XPNPEP2O43895 674 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 CYB5AP00167 134 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 CHRM2P08172 466 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 HCKP08631 526 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 COX7A1P24310 79 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 IER3P46695 156 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 BMXP51813 675 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 UBE2E1P51965 193 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 RELBQ01201 579 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 MRPL28Q13084 256 aaKnown RBP13.46□□□□□ -0.25
DDX41-213ENST00000512027 CDK5R1Q15078 307 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 C17orf107Q6ZR85 190 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 C1orf122Q6ZSJ8 110 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 TCF23Q7RTU1 214 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 LDLRAD3Q86YD5 345 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 ZFP41Q8N8Y5 198 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 OR51A2Q8NGJ7 313 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 SSMEM1Q8WWF3 244 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 GGHQ92820 318 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 ORAI1Q96D31 301 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 FAM234AQ9H0X4 552 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 UNKLQ9H9P5 680 aaKnown RBP13.46□□□□□ -0.25
DDX41-213ENST00000512027 C8orf4Q9NR00 106 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 GSTK1Q9Y2Q3 226 aa13.46□□□□□ -0.25
DDX41-213ENST00000512027 CAB39Q9Y376 341 aaPredicted RBP13.46□□□□□ -0.25
DDX41-213ENST00000512027 PKD1L1Q8TDX9 2849 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 SULT1B1O43704 296 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 PSPNO60542 156 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 MT-ND2P03891 347 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 FBP1P09467 338 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 GABRR1P24046 479 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 DLX6P56179 175 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 DOC2BQ14184 412 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 TAF9Q16594 264 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 NCR3LG1Q68D85 454 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 GDPD3Q7L5L3 318 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 Q8IYB0 196 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 C8orf59Q8N0T1 100 aaPredicted RBP13.45□□□□□ -0.26
DDX41-213ENST00000512027 OR8H2Q8N162 312 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 PARP16Q8N5Y8 322 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 OR4S1Q8NGB4 309 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 OR5D13Q8NGL4 314 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 RPS4Y2Q8TD47 263 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 TMEM80Q96HE8 168 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 HMG20AQ9NP66 347 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 TAS2R4Q9NYW5 299 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 C1RLQ9NZP8 487 aa13.45□□□□□ -0.26
DDX41-213ENST00000512027 EXOSC1Q9Y3B2 195 aaKnown RBP13.45□□□□□ -0.26
DDX41-213ENST00000512027 GPR137BO60478 399 aa13.44□□□□□ -0.26
DDX41-213ENST00000512027 KDM4BO94953 1096 aa13.44□□□□□ -0.26
DDX41-213ENST00000512027 MYL12AP19105 171 aa13.44□□□□□ -0.26
DDX41-213ENST00000512027 ZP1P60852 638 aa13.44□□□□□ -0.26
DDX41-213ENST00000512027 ST3GAL4Q11206 333 aa13.44□□□□□ -0.26
DDX41-213ENST00000512027 KISS1Q15726 138 aa13.44□□□□□ -0.26
DDX41-213ENST00000512027 GRK1Q15835 563 aa13.44□□□□□ -0.26
DDX41-213ENST00000512027 RPL22L1Q6P5R6 122 aaKnown RBP13.44□□□□□ -0.26
DDX41-213ENST00000512027 TMPRSS11AQ6ZMR5 421 aa13.44□□□□□ -0.26
DDX41-213ENST00000512027 SERPINA12Q8IW75 414 aa13.44□□□□□ -0.26
DDX41-213ENST00000512027 TMEM86BQ8N661 226 aa13.44□□□□□ -0.26
DDX41-213ENST00000512027 OR5D14Q8NGL3 314 aa13.44□□□□□ -0.26
DDX41-213ENST00000512027 TBC1D15Q8TC07 691 aa13.44□□□□□ -0.26
DDX41-213ENST00000512027 NRG4Q8WWG1 115 aa13.44□□□□□ -0.26
DDX41-213ENST00000512027 AJUBAQ96IF1 538 aa13.44□□□□□ -0.26
DDX41-213ENST00000512027 SNX22Q96L94 193 aa13.44□□□□□ -0.26
DDX41-213ENST00000512027 POMT1Q9Y6A1 747 aa13.44□□□□□ -0.26
DDX41-213ENST00000512027 PNMA8CA0A1B0GUJ8 204 aa13.43□□□□□ -0.26
DDX41-213ENST00000512027 IRGMA1A4Y4 181 aa13.43□□□□□ -0.26
DDX41-213ENST00000512027 ERICH4A6NGS2 130 aa13.43□□□□□ -0.26
DDX41-213ENST00000512027 OR2H2O95918 312 aa13.43□□□□□ -0.26
DDX41-213ENST00000512027 PAHP00439 452 aa13.43□□□□□ -0.26
DDX41-213ENST00000512027 RPSAP08865 295 aaKnown RBP13.43□□□□□ -0.26
DDX41-213ENST00000512027 TMEM225BP0DP42 221 aa13.43□□□□□ -0.26
DDX41-213ENST00000512027 OR3A1P47881 315 aa13.43□□□□□ -0.26
DDX41-213ENST00000512027 ZNF146Q15072 292 aa13.43□□□□□ -0.26
DDX41-213ENST00000512027 AHSA2Q719I0 299 aa13.43□□□□□ -0.26
DDX41-213ENST00000512027 BPIFB6Q8NFQ5 453 aa13.43□□□□□ -0.26
DDX41-213ENST00000512027 GPR148Q8TDV2 347 aa13.43□□□□□ -0.26
DDX41-213ENST00000512027 EXOSC4Q9NPD3 245 aaKnown RBP13.43□□□□□ -0.26
DDX41-213ENST00000512027 BABAM2Q9NXR7 383 aa13.43□□□□□ -0.26
DDX41-213ENST00000512027 SF3B6Q9Y3B4 125 aaKnown RBP13.43□□□□□ -0.26
DDX41-213ENST00000512027 A0A1W2PPH5 198 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 C17orf98A8MV24 154 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 GABRPO00591 440 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 OGG1O15527 345 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 RAB3AP20336 220 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 RAG2P55895 527 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 SCN1BQ07699 218 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 ACSM1Q08AH1 577 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 CCDC58Q4VC31 144 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 SPIN3Q5JUX0 258 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 ZNF529Q6P280 563 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 LHFPL4Q7Z7J7 247 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 SATL1Q86VE3 508 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 ZNF485Q8NCK3 441 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 OR10K1Q8NGX5 313 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms