RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 BCL9O00512 1426 aa1.32□□□□□ -2.2
SCAMP1-204ENST00000511551 SPTBN2O15020 2390 aa1.32□□□□□ -2.2
SCAMP1-204ENST00000511551 TECPR2O15040 1411 aa1.32□□□□□ -2.2
SCAMP1-204ENST00000511551 COL1A1P02452 1464 aaPredicted RBP1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 NUP153P49790 1475 aaKnown RBP1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 BTAF1O14981 1849 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 SEC16AO15027 2179 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 PCNX1Q96RV3 2341 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 TRPM1Q7Z4N2 1603 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 EIF2AK4Q9P2K8 1649 aaKnown RBP1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 IGHV3-49A0A0A0MS15 119 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 IGHV1-3A0A0C4DH29 117 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 GSTTP1A0A1W2PQM5 241 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 C16orf90A8MZG2 172 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 H0YC42 278 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 K7EM74 188 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 SLC19A2O60779 497 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 NTF3P20783 257 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 IL3RAP26951 378 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 PSMB5P28074 263 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 GNRHRP30968 328 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 CCNG1P51959 295 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 PSMD4P55036 377 aaKnown RBP1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 CMC4P56277 68 aaPredicted RBP1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 KRTAP12-3P60328 96 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 PAFAH1B2P68402 229 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 ELF3P78545 371 aaPredicted RBP1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 FBXL19-AS1Q494R0 122 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 CST9Q5W186 159 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 MORN3Q6PF18 240 aaPredicted RBP1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 ERO1BQ86YB8 467 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 MIR7-3HGQ8N6C7 128 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 TMEM105Q8N8V8 129 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 APCDD1LQ8NCL9 501 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 OR13G1Q8NGZ3 307 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 ENKURQ8TC29 256 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 TMEM234Q8WY98 164 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 CIDECQ96AQ7 238 aaPredicted RBP1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 RMI2Q96E14 147 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 IP6K3Q96PC2 410 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 ULBP2Q9BZM5 246 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 ING2Q9H160 280 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 ARV1Q9H2C2 271 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 TFR2Q9UP52 801 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 KLF12Q9Y4X4 402 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 NHSQ6T4R5 1651 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 NF1P21359 2839 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 DSPP15924 2871 aaKnown RBP1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 ANKRD26Q9UPS8 1709 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 IGSF10Q6WRI0 2623 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 KIAA1107Q9UPP5 1409 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 COL12A1Q99715 3063 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 KMT2EQ8IZD2 1858 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 FYCO1Q9BQS8 1478 aa1.31□□□□□ -2.2
SCAMP1-204ENST00000511551 CACNA1HO95180 2353 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 PDZD2O15018 2839 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 SHROOM3Q8TF72 1996 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 SPTA1P02549 2419 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 CTTNBP2Q8WZ74 1663 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 LY75O60449 1722 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 TJP1Q07157 1748 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 IGHV3OR16-8A0A075B7F1 116 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 IGKV1-6A0A0C4DH72 117 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 ANKRD20A5PA0PJZ0 165 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 CENPXA8MT69 81 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 M0R1X1 148 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 LGALS9O00182 355 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 ETHE1O95571 254 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 TTC4O95801 387 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 PTTG1O95997 202 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 IGKV1-39P01597 117 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 IGKV1-17P01599 117 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 MBP02144 154 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 IGKV1D-39P04432 117 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 IL4P05112 153 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 ARL2P36404 184 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 HCCSP53701 268 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 MTPNP58546 118 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 SLC35A1P78382 337 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 PITPNAQ00169 270 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 C2orf54Q08AI8 447 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 FUT5Q11128 374 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 ST3GAL4Q11206 333 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 IGFBP7Q16270 282 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 LINC00303Q3SY05 128 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 SP6Q3SY56 376 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 CPTPQ5TA50 214 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 APOBEC3HQ6NTF7 200 aaKnown RBP1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 SLC25A34Q6PIV7 304 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 EPGNQ6UW88 154 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 SLC7A5P1Q8MH63 180 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 ZCCHC24Q8N2G6 241 aaKnown RBP1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 OR2M7Q8NG81 312 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 OR6K6Q8NGW6 343 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 KLF14Q8TD94 323 aaPredicted RBP1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 MITD1Q8WV92 249 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 RXFP2Q8WXD0 754 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 CPNE4Q96A23 557 aaPredicted RBP1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 S100PBPQ96BU1 408 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms