RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 IL4I1Q96RQ9 567 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 TSC22D3Q99576 134 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 TMPRSS13Q9BYE2 586 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 KAT8Q9H7Z6 458 aaKnown RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 PLGRKTQ9HBL7 147 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 GCM1Q9NP62 436 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 DNAJC27Q9NZQ0 273 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 GMPR2Q9P2T1 348 aaKnown RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 FOXJ3Q9UPW0 622 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 TPRKBQ9Y3C4 175 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 CPAMD8Q8IZJ3 1885 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 F5H0A9 414 aaPredicted RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 LYNX1G3V0Z9 82 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 H3BNX3 289 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 EBAG9O00559 213 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 MRPS14O60783 128 aaKnown RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 MT-ND2P03891 347 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 TSPAN19P0C672 248 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 ACSM4P0C7M7 580 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 LYNX1P0DP58 116 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 CD36P16671 472 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 ATF1P18846 271 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 MPV17P39210 176 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 TCTAP57738 103 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 RELBQ01201 579 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 FOXE3Q13461 319 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 ARFRP1Q13795 201 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 RPEL1Q2QD12 228 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 KRBOX4Q5JUW0 171 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 C1orf146Q5VVC0 180 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 SFXN4Q6P4A7 337 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 IZUMO1Q8IYV9 350 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 OR8H2Q8N162 312 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 CIARTQ8N365 385 aaPredicted RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 POC1AQ8NBT0 407 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 KLHL30-AS1Q8NEE0 82 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 OR52M1Q8NGK5 317 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 TNFAIP8L1Q8WVP5 186 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 PHYHIPQ92561 330 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 HDAC2Q92769 488 aaKnown RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 ST6GALNAC6Q969X2 333 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 DGCR6LQ9BY27 220 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 GORASP2Q9H8Y8 452 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 RANGRFQ9HD47 186 aaPredicted RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 NRIP3Q9NQ35 241 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 G6PC2Q9NQR9 355 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 CMC2Q9NRP2 79 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 ETAA1Q9NY74 926 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 NUFIP1Q9UHK0 495 aaKnown RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 TCF19Q9Y242 345 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 KCNE3Q9Y6H6 103 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 R4GMQ9 66 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 CCDC88CQ9P219 2028 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 CHD6Q8TD26 2715 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 ANKRD17O75179 2603 aaKnown RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 EFCAB10A6NFE3 127 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 OR4C46A6NHA9 309 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 H3BUA1 57 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 K7N7A8 449 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 UBE2CO00762 179 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 OVOL1O14753 267 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 RP2O75695 350 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 HAND1O96004 215 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 HRASP01112 189 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 RLN1P04808 185 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 DEFA4P12838 97 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 HSD17B1P14061 328 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 ARSBP15848 533 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 SAA4P35542 130 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 MECP2P51608 486 aaKnown RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF121P58317 390 aaPredicted RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 HOXC5Q00444 222 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 ZBTB46Q86UZ6 589 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 OSR2Q8N2R0 312 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 Q8N402 240 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 USMG5Q96IX5 58 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 CITED2Q99967 270 aaPredicted RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 TMEM133Q9H2Q1 129 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 LIN7CQ9NUP9 197 aaKnown RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 FKBP11Q9NYL4 201 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 IDI2-AS1Q9NZ38 188 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 ZNRD1Q9P1U0 126 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 GNG8Q9UK08 70 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 WSB1Q9Y6I7 421 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 RPS10-NUDT3A0A1W2PQS6 291 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 A0A1W2PRD5 423 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 A0A1W2PRF3 423 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 A0A1W2PRM7 423 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 FAM90A10PA6NDY2 464 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 FAM90A18PA6NE21 464 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 FAM90A16PA6NEW6 464 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 FAM90A20PA6NIJ5 464 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 FAM90A8PA6NJQ4 464 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 FAM90A7PA6NKC0 464 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 FAM90A22PA8MWA6 464 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 FAM90A12PA8MX19 464 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 FAM90A5PA8MXJ8 464 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 FAM90A23PA8MXZ1 464 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 CDIPTO14735 213 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 SNNO75324 88 aaPredicted RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms