RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 TMEM200BQ69YZ2 307 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 C17orf107Q6ZR85 190 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 C9orf139Q6ZV77 190 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 SERPINA12Q8IW75 414 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 FAM58AQ8N1B3 248 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 OR4S1Q8NGB4 309 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 GPR148Q8TDV2 347 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 C17orf50Q8WW18 174 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 TMEM106AQ96A25 262 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 SPSB1Q96BD6 273 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 OR14A2Q96R54 314 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 ANKRD60Q9BZ19 345 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 TNFRSF19Q9NS68 423 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 ZNF281Q9Y2X9 895 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 IGHV1-69DA0A0B4J2H0 117 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 A0A0U1RQK1 487 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 A0A1W2PQ09 198 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 K7N7A8 449 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 SIRPB1O00241 398 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 KDM4BO94953 1096 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 HAND1O96004 215 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 IGHV1-69P01742 117 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 LIPFP07098 398 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 OCM2P0CE71 109 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 IGFBP3P17936 291 aaPredicted RBP11.11□□□□□ -0.63
SNF8-206ENST00000509989 CELP19835 753 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 FPR2P25090 351 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 MAP2K4P45985 399 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 OR3A4PP47883 348 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 GP2P55259 537 aaKnown RBP11.11□□□□□ -0.63
SNF8-206ENST00000509989 DLX6P56179 175 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 WNT4P56705 351 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 UBA52P62987 128 aaKnown RBP11.11□□□□□ -0.63
SNF8-206ENST00000509989 SLC35A2P78381 396 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 SATL1Q86VE3 508 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 ZNF561Q8N587 486 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 ASCC1Q8N9N2 400 aaKnown RBP11.11□□□□□ -0.63
SNF8-206ENST00000509989 CNBD2Q96M20 576 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 SUCNR1Q9BXA5 334 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 HMG20AQ9NP66 347 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 GSTK1Q9Y2Q3 226 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 KPTNQ9Y664 436 aa11.11□□□□□ -0.63
SNF8-206ENST00000509989 TRBV5-7A0A0A0MS05 114 aa11.1□□□□□ -0.63
SNF8-206ENST00000509989 A0A1W2PP11 408 aa11.1□□□□□ -0.63
SNF8-206ENST00000509989 MYL12BO14950 172 aa11.1□□□□□ -0.63
SNF8-206ENST00000509989 CDRT1O95170 752 aa11.1□□□□□ -0.63
SNF8-206ENST00000509989 TMEM225BP0DP42 221 aa11.1□□□□□ -0.63
SNF8-206ENST00000509989 RAB3AP20336 220 aa11.1□□□□□ -0.63
SNF8-206ENST00000509989 OR3A1P47881 315 aa11.1□□□□□ -0.63
SNF8-206ENST00000509989 RIPK1Q13546 671 aa11.1□□□□□ -0.63
SNF8-206ENST00000509989 SLC9A3R2Q15599 337 aa11.1□□□□□ -0.63
SNF8-206ENST00000509989 FAM27D1Q5T7N8 215 aa11.1□□□□□ -0.63
SNF8-206ENST00000509989 GPR157Q5UAW9 335 aa11.1□□□□□ -0.63
SNF8-206ENST00000509989 Q6P435 159 aa11.1□□□□□ -0.63
SNF8-206ENST00000509989 USP43Q70EL4 1123 aa11.1□□□□□ -0.63
SNF8-206ENST00000509989 MKXQ8IYA7 352 aa11.1□□□□□ -0.63
SNF8-206ENST00000509989 TEX29Q8N6K0 151 aa11.1□□□□□ -0.63
SNF8-206ENST00000509989 OR5D14Q8NGL3 314 aa11.1□□□□□ -0.63
SNF8-206ENST00000509989 AJUBAQ96IF1 538 aa11.1□□□□□ -0.63
SNF8-206ENST00000509989 DUSP21Q9H596 190 aa11.1□□□□□ -0.63
SNF8-206ENST00000509989 NEK6Q9HC98 313 aa11.1□□□□□ -0.63
SNF8-206ENST00000509989 CHCHD3Q9NX63 227 aaKnown RBP11.1□□□□□ -0.63
SNF8-206ENST00000509989 GPR37O15354 613 aa11.09□□□□□ -0.63
SNF8-206ENST00000509989 HOXA3O43365 443 aaPredicted RBP11.09□□□□□ -0.63
SNF8-206ENST00000509989 ALX3O95076 343 aa11.09□□□□□ -0.63
SNF8-206ENST00000509989 OR2H2O95918 312 aa11.09□□□□□ -0.63
SNF8-206ENST00000509989 CHRM2P08172 466 aa11.09□□□□□ -0.63
SNF8-206ENST00000509989 OCMP0CE72 109 aaPredicted RBP11.09□□□□□ -0.63
SNF8-206ENST00000509989 RPL31P62899 125 aaKnown RBP11.09□□□□□ -0.63
SNF8-206ENST00000509989 SCN1BQ07699 218 aa11.09□□□□□ -0.63
SNF8-206ENST00000509989 BAMBIQ13145 260 aa11.09□□□□□ -0.63
SNF8-206ENST00000509989 EDDM3AQ14507 147 aa11.09□□□□□ -0.63
SNF8-206ENST00000509989 UTF1Q5T230 341 aa11.09□□□□□ -0.63
SNF8-206ENST00000509989 BAIAP2L2Q6UXY1 529 aa11.09□□□□□ -0.63
SNF8-206ENST00000509989 ZNF782Q6ZMW2 699 aaPredicted RBP11.09□□□□□ -0.63
SNF8-206ENST00000509989 KIR3DL3Q8N743 410 aa11.09□□□□□ -0.63
SNF8-206ENST00000509989 TNFAIP8L1Q8WVP5 186 aa11.09□□□□□ -0.63
SNF8-206ENST00000509989 MYCBPQ99417 103 aaPredicted RBP11.09□□□□□ -0.63
SNF8-206ENST00000509989 CDCA4Q9BXL8 241 aa11.09□□□□□ -0.63
SNF8-206ENST00000509989 PPIL3Q9H2H8 161 aaKnown RBP11.09□□□□□ -0.63
SNF8-206ENST00000509989 ING3Q9NXR8 418 aa11.09□□□□□ -0.63
SNF8-206ENST00000509989 ANK2Q01484 3957 aa11.08□□□□□ -0.64
SNF8-206ENST00000509989 A0A0A6YYJ9 748 aa11.08□□□□□ -0.64
SNF8-206ENST00000509989 MMP23AO75900 390 aa11.08□□□□□ -0.64
SNF8-206ENST00000509989 GABRR1P24046 479 aa11.08□□□□□ -0.64
SNF8-206ENST00000509989 CRHBPP24387 322 aa11.08□□□□□ -0.64
SNF8-206ENST00000509989 EDDM3BP56851 147 aa11.08□□□□□ -0.64
SNF8-206ENST00000509989 ZNF146Q15072 292 aa11.08□□□□□ -0.64
SNF8-206ENST00000509989 C11orf91Q3C1V1 193 aa11.08□□□□□ -0.64
SNF8-206ENST00000509989 PIGYQ3MUY2 71 aa11.08□□□□□ -0.64
SNF8-206ENST00000509989 Q499Y3 187 aa11.08□□□□□ -0.64
SNF8-206ENST00000509989 DDI2Q5TDH0 399 aa11.08□□□□□ -0.64
SNF8-206ENST00000509989 SPATA3Q8NHX4 192 aa11.08□□□□□ -0.64
SNF8-206ENST00000509989 DERL3Q96Q80 235 aa11.08□□□□□ -0.64
SNF8-206ENST00000509989 NR1H4Q96RI1 486 aaPredicted RBP11.08□□□□□ -0.64
SNF8-206ENST00000509989 PRDM13Q9H4Q3 707 aa11.08□□□□□ -0.64
SNF8-206ENST00000509989 TRBV23-1A0A0A0MS06 115 aa11.07□□□□□ -0.64
SNF8-206ENST00000509989 A0A0G2JK05 382 aa11.07□□□□□ -0.64
SNF8-206ENST00000509989 MAS1P04201 325 aa11.07□□□□□ -0.64
SNF8-206ENST00000509989 MELTFP08582 738 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms