RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 OR2AT4A6NND4 320 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 INMTO95050 263 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 IRF2P14316 349 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 SRD5A1P18405 259 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 GLRA1P23415 457 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 FPR2P25090 351 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 OR3A4PP47883 348 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 POU3F4P49335 361 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 DLX6P56179 175 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 ERVFRD-1P60508 538 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 GNB2P62879 340 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 IL24Q13007 206 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 IKZF1Q13422 519 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 ZNF273Q14593 569 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 KLHL22Q53GT1 634 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 LDLRAD2Q5SZI1 272 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 UTF1Q5T230 341 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 RNLSQ5VYX0 342 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 FAHD2BQ6P2I3 314 aaPredicted RBP5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 RPL22L1Q6P5R6 122 aaKnown RBP5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 METAP1DQ6UB28 335 aaPredicted RBP5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 SLC25A26Q70HW3 274 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 BTN2A1Q7KYR7 527 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 KCTD20Q7Z5Y7 419 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 PEG10Q86TG7 708 aaKnown RBP5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 PHC2Q8IXK0 858 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 FTMTQ8N4E7 242 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 C11orf42Q8N5U0 333 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 ZNF676Q8N7Q3 588 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 NANOGP1Q8N7R0 232 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 OR4M2Q8NGB6 313 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 OR52N4Q8NGI2 321 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 OR5AK2Q8NH90 309 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 C8orf46Q8TAG6 207 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 RAB40AQ8WXH6 277 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 ST8SIA4Q92187 359 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 GHSRQ92847 366 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 C12orf43Q96C57 262 aaKnown RBP5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 FAHD2AQ96GK7 314 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 AJUBAQ96IF1 538 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 CNBD2Q96M20 576 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 OPALINQ96PE5 141 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 TECTBQ96PL2 329 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 OR14A2Q96R54 314 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 GFI1Q99684 422 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 ARPC5LQ9BPX5 153 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 NUDT16L1Q9BRJ7 211 aaKnown RBP5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 DCTN5Q9BTE1 182 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 SHARPINQ9H0F6 387 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 KCNK15Q9H427 330 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 PLEKHA1Q9HB21 404 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 LPAR3Q9UBY5 353 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 CLN8Q9UBY8 286 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 MIOXQ9UGB7 285 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 OR5V1Q9UGF6 321 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 RPUSD1Q9UJJ7 312 aaKnown RBP5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 TRBV2A0A0J9YWF9 115 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 KIR2DS1A0A191URI9 304 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 RFPL4AA6NLU0 287 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 SNTNA6NMZ2 147 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 RFPL4AL1F8VTS6 287 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 J3QLI3 93 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 SULT1B1O43704 296 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 PSPNO60542 156 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 SC5DO75845 299 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 GATBO75879 557 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 KDM4BO94953 1096 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 ACAA1P09110 424 aaPredicted RBP5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 CCDC159P0C7I6 412 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 MUC1P15941 1255 aaPredicted RBP5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 CCL3L1P16619 93 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 DUSP1P28562 367 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 VHLP40337 213 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 OR3A1P47881 315 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 GBX2P52951 348 aaPredicted RBP5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 SNU13P55769 128 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 WNT4P56705 351 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 RPS25P62851 125 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 SNCBQ16143 134 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 SSX1Q16384 188 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 BAIAP2L2Q6UXY1 529 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 BRD3OSQ6XYD6 125 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 C17orf107Q6ZR85 190 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 ZDHHC22Q8N966 263 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 DNAAF1Q8NEP3 725 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 TSEN15Q8WW01 171 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 C17orf50Q8WW18 174 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 PP6455Q8WZ26 134 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 ITFG2Q969R8 447 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 SPSB1Q96BD6 273 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 C10orf35Q96D05 121 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 CEP19Q96LK0 163 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 DERL3Q96Q80 235 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 CDCA4Q9BXL8 241 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 BEX2Q9BXY8 128 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 ZCCHC4Q9H5U6 513 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 BABAM2Q9NXR7 383 aa5.91□□□□□ -1.46
TOPBP1-207ENST00000509162 DOCK11Q5JSL3 2073 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 A0A1W2PPK0 400 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 NKX6-3A6NJ46 265 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms