RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 TAF9Q16594 264 aa11.87□□□□□ -0.51
RNF4-208ENST00000507247 NHLRC3Q5JS37 347 aa11.87□□□□□ -0.51
RNF4-208ENST00000507247 STUMQ69YW2 141 aa11.87□□□□□ -0.51
RNF4-208ENST00000507247 CMTM4Q8IZR5 234 aa11.87□□□□□ -0.51
RNF4-208ENST00000507247 PTX4Q96A99 478 aa11.87□□□□□ -0.51
RNF4-208ENST00000507247 MRPS24Q96EL2 167 aaKnown RBP11.87□□□□□ -0.51
RNF4-208ENST00000507247 C6orf62Q9GZU0 229 aaPredicted RBP11.87□□□□□ -0.51
RNF4-208ENST00000507247 TMEM165Q9HC07 324 aa11.87□□□□□ -0.51
RNF4-208ENST00000507247 RHBDL2Q9NX52 303 aa11.87□□□□□ -0.51
RNF4-208ENST00000507247 PTTG2Q9NZH5 202 aa11.87□□□□□ -0.51
RNF4-208ENST00000507247 OR14J1Q9UGF5 321 aa11.87□□□□□ -0.51
RNF4-208ENST00000507247 ZNF222Q9UK12 451 aa11.87□□□□□ -0.51
RNF4-208ENST00000507247 CSMD2Q7Z408 3487 aa11.87□□□□□ -0.51
RNF4-208ENST00000507247 SPG11Q96JI7 2443 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 RFPL4AA6NLU0 287 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 OR2AT4A6NND4 320 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 RFPL4AL1F8VTS6 287 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 TNFRSF13BO14836 293 aaPredicted RBP11.86□□□□□ -0.51
RNF4-208ENST00000507247 GYPAP02724 150 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 MUC1P15941 1255 aaPredicted RBP11.86□□□□□ -0.51
RNF4-208ENST00000507247 GABRR1P24046 479 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 GIFP27352 417 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 ART1P52961 327 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 TMEM33P57088 247 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 MICBQ29980 383 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 MOGAT2Q3SYC2 334 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 SPIN3Q5JUX0 258 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 UBE2NLQ5JXB2 153 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 SIGIRRQ6IA17 410 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 Q6P435 159 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 DNM1P46Q6ZS02 220 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 RTN4RL2Q86UN3 420 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 LAX1Q8IWV1 398 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 LRRC75A-AS1Q8N1F1 130 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 FAM89BQ8N5H3 189 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 CD177Q8N6Q3 437 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 ANGPTL6Q8NI99 470 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 URM1Q9BTM9 101 aaKnown RBP11.86□□□□□ -0.51
RNF4-208ENST00000507247 ABCG5Q9H222 651 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 MMP27Q9H306 513 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 METRNQ9UJH8 293 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 A3GALT2U3KPV4 340 aa11.86□□□□□ -0.51
RNF4-208ENST00000507247 PDZD2O15018 2839 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 TRAV38-1A0A0B4J264 116 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 A0A1B0GW55 424 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 ISPDA4D126 451 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 FOXI3A8MTJ6 420 aaPredicted RBP11.85□□□□□ -0.51
RNF4-208ENST00000507247 SOCS1O15524 211 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 RGS5O15539 181 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 FSTL3O95633 263 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 OR2H2O95918 312 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 HAND1O96004 215 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 DUX4L2P0CJ85 424 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 DUX4L3P0CJ86 424 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 DUX4L4P0CJ87 422 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 DUX4L5P0CJ88 424 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 DUX4L6P0CJ89 424 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 DUX4L7P0CJ90 424 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 ELK1P19419 428 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 CPT2P23786 658 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 MDH2P40926 338 aaKnown RBP11.85□□□□□ -0.51
RNF4-208ENST00000507247 GPR6P46095 362 aaPredicted RBP11.85□□□□□ -0.51
RNF4-208ENST00000507247 VEGFCP49767 419 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 IKZF1Q13422 519 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 DUX4L9Q6RFH8 374 aaPredicted RBP11.85□□□□□ -0.51
RNF4-208ENST00000507247 FIP1L1Q6UN15 594 aaKnown RBP11.85□□□□□ -0.51
RNF4-208ENST00000507247 PEG10Q86TG7 708 aaKnown RBP11.85□□□□□ -0.51
RNF4-208ENST00000507247 LRRC28Q86X40 367 aaPredicted RBP11.85□□□□□ -0.51
RNF4-208ENST00000507247 C10orf105Q8TEF2 133 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 FAM168AQ92567 244 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 RAB1CQ92928 201 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 TIMD4Q96H15 378 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 CMTM3Q96MX0 182 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 TMEM246Q9BRR3 403 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 BPESC1Q9GZL8 116 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 ATG5Q9H1Y0 275 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 DUX4Q9UBX2 424 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 APCP25054 2843 aa11.85□□□□□ -0.51
RNF4-208ENST00000507247 RAB27BO00194 218 aa11.84□□□□□ -0.51
RNF4-208ENST00000507247 SIRPB1O00241 398 aa11.84□□□□□ -0.51
RNF4-208ENST00000507247 CLPXO76031 633 aa11.84□□□□□ -0.51
RNF4-208ENST00000507247 OR7C1O76099 320 aaPredicted RBP11.84□□□□□ -0.51
RNF4-208ENST00000507247 APOA1P02647 267 aa11.84□□□□□ -0.51
RNF4-208ENST00000507247 CSF3P09919 207 aa11.84□□□□□ -0.51
RNF4-208ENST00000507247 SELLP14151 372 aa11.84□□□□□ -0.51
RNF4-208ENST00000507247 PRDX2P32119 198 aa11.84□□□□□ -0.51
RNF4-208ENST00000507247 GABRA2P47869 451 aa11.84□□□□□ -0.51
RNF4-208ENST00000507247 COL10A1Q03692 680 aa11.84□□□□□ -0.51
RNF4-208ENST00000507247 SCN1BQ07699 218 aa11.84□□□□□ -0.51
RNF4-208ENST00000507247 MPV17LQ2QL34 196 aa11.84□□□□□ -0.51
RNF4-208ENST00000507247 CLEC2AQ6UVW9 174 aa11.84□□□□□ -0.51
RNF4-208ENST00000507247 LYPD2Q6UXB3 125 aa11.84□□□□□ -0.51
RNF4-208ENST00000507247 LINC00596Q86U02 117 aa11.84□□□□□ -0.51
RNF4-208ENST00000507247 KRTAP1-3Q8IUG1 177 aa11.84□□□□□ -0.51
RNF4-208ENST00000507247 DTX3Q8N9I9 347 aa11.84□□□□□ -0.51
RNF4-208ENST00000507247 GAFA1Q96PS6 74 aa11.84□□□□□ -0.51
RNF4-208ENST00000507247 CCL13Q99616 98 aa11.84□□□□□ -0.51
RNF4-208ENST00000507247 SEBOXQ9HB31 216 aaPredicted RBP11.84□□□□□ -0.51
RNF4-208ENST00000507247 MYO9AB2RTY4 2548 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 IGHV4-30-2A0A087WSY4 118 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms