RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 ACSM1Q08AH1 577 aa12.75□□□□□ -0.37
CLDND1-211ENST00000506575 CCDC58Q4VC31 144 aa12.75□□□□□ -0.37
CLDND1-211ENST00000506575 OGFRL1Q5TC84 451 aaPredicted RBP12.75□□□□□ -0.37
CLDND1-211ENST00000506575 RPL22L1Q6P5R6 122 aaKnown RBP12.75□□□□□ -0.37
CLDND1-211ENST00000506575 C8orf59Q8N0T1 100 aaPredicted RBP12.75□□□□□ -0.37
CLDND1-211ENST00000506575 ZSCAN4Q8NAM6 433 aaPredicted RBP12.75□□□□□ -0.37
CLDND1-211ENST00000506575 SNX22Q96L94 193 aa12.75□□□□□ -0.37
CLDND1-211ENST00000506575 SPACA5Q96QH8 159 aa12.75□□□□□ -0.37
CLDND1-211ENST00000506575 HEXA-AS1Q9H8Q6 139 aa12.75□□□□□ -0.37
CLDND1-211ENST00000506575 DIMT1Q9UNQ2 313 aaKnown RBP12.75□□□□□ -0.37
CLDND1-211ENST00000506575 PCDHGB5Q9Y5G0 923 aa12.75□□□□□ -0.37
CLDND1-211ENST00000506575 HSPE1-MOB4S4R3N1 261 aa12.75□□□□□ -0.37
CLDND1-211ENST00000506575 CASQ2O14958 399 aaPredicted RBP12.74□□□□□ -0.37
CLDND1-211ENST00000506575 ZNF737O75373 536 aa12.74□□□□□ -0.37
CLDND1-211ENST00000506575 GABRR1P24046 479 aa12.74□□□□□ -0.37
CLDND1-211ENST00000506575 CAPGP40121 348 aa12.74□□□□□ -0.37
CLDND1-211ENST00000506575 IER3P46695 156 aa12.74□□□□□ -0.37
CLDND1-211ENST00000506575 SNU13P55769 128 aaKnown RBP12.74□□□□□ -0.37
CLDND1-211ENST00000506575 SPIN3Q5JUX0 258 aa12.74□□□□□ -0.37
CLDND1-211ENST00000506575 OR8H2Q8N162 312 aa12.74□□□□□ -0.37
CLDND1-211ENST00000506575 PNKDQ8N490 385 aa12.74□□□□□ -0.37
CLDND1-211ENST00000506575 PARP16Q8N5Y8 322 aa12.74□□□□□ -0.37
CLDND1-211ENST00000506575 OR5D18Q8NGL1 313 aa12.74□□□□□ -0.37
CLDND1-211ENST00000506575 DYRK2Q92630 601 aa12.74□□□□□ -0.37
CLDND1-211ENST00000506575 CPNE2Q96FN4 548 aaPredicted RBP12.74□□□□□ -0.37
CLDND1-211ENST00000506575 TMEM80Q96HE8 168 aa12.74□□□□□ -0.37
CLDND1-211ENST00000506575 SEBOXQ9HB31 216 aaPredicted RBP12.74□□□□□ -0.37
CLDND1-211ENST00000506575 IL36RNQ9UBH0 155 aa12.74□□□□□ -0.37
CLDND1-211ENST00000506575 DSCAML1Q8TD84 2053 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 MAGEB3O15480 346 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 ALX3O95076 343 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 CD2P06729 351 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 TMEM225BP0DP42 221 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 CALCBP10092 127 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 CCL3L1P16619 93 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 RAB3AP20336 220 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 OMGP23515 440 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 DUSP1P28562 367 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 ERVFRD-1P60508 538 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 EDDM3AQ14507 147 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 ZNF273Q14593 569 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 ZNF146Q15072 292 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 CDK5R1Q15078 307 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 GRK1Q15835 563 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 MIDNQ504T8 468 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 OR2G6Q5TZ20 316 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 SAXO1Q8IYX7 474 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 PPP1R35Q8TAP8 253 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 GPR148Q8TDV2 347 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 ZNF747Q9BV97 191 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 DCLRE1BQ9H816 532 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 RHOFQ9HBH0 211 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 HMG20AQ9NP66 347 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 EXOSC4Q9NPD3 245 aaKnown RBP12.73□□□□□ -0.37
CLDND1-211ENST00000506575 BABAM2Q9NXR7 383 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 ZNRD1Q9P1U0 126 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 GSTK1Q9Y2Q3 226 aa12.73□□□□□ -0.37
CLDND1-211ENST00000506575 TMEM82A0PJX8 343 aa12.72□□□□□ -0.37
CLDND1-211ENST00000506575 EFCAB10A6NFE3 127 aa12.72□□□□□ -0.37
CLDND1-211ENST00000506575 POM121CA8CG34 1229 aa12.72□□□□□ -0.37
CLDND1-211ENST00000506575 SH2D1BO14796 132 aa12.72□□□□□ -0.37
CLDND1-211ENST00000506575 KDM4BO94953 1096 aa12.72□□□□□ -0.37
CLDND1-211ENST00000506575 SOX2P48431 317 aa12.72□□□□□ -0.37
CLDND1-211ENST00000506575 RAG2P55895 527 aa12.72□□□□□ -0.37
CLDND1-211ENST00000506575 RPL15P61313 204 aaKnown RBP12.72□□□□□ -0.37
CLDND1-211ENST00000506575 MEF2CQ06413 473 aaPredicted RBP12.72□□□□□ -0.37
CLDND1-211ENST00000506575 KISS1Q15726 138 aa12.72□□□□□ -0.37
CLDND1-211ENST00000506575 SHISA2Q6UWI4 295 aa12.72□□□□□ -0.37
CLDND1-211ENST00000506575 GDPGP1Q6ZNW5 385 aa12.72□□□□□ -0.37
CLDND1-211ENST00000506575 C17orf107Q6ZR85 190 aa12.72□□□□□ -0.37
CLDND1-211ENST00000506575 OR4F5Q8NH21 305 aa12.72□□□□□ -0.37
CLDND1-211ENST00000506575 TAF15Q92804 592 aaKnown RBP eCLIP12.72□□□□□ -0.37
CLDND1-211ENST00000506575 GPER1Q99527 375 aa12.72□□□□□ -0.37
CLDND1-211ENST00000506575 CHST6Q9GZX3 395 aa12.72□□□□□ -0.37
CLDND1-211ENST00000506575 BEX1Q9HBH7 125 aa12.72□□□□□ -0.37
CLDND1-211ENST00000506575 IGKV1-12A0A0C4DH73 117 aa12.71□□□□□ -0.37
CLDND1-211ENST00000506575 A0A1B0GUS0 222 aa12.71□□□□□ -0.37
CLDND1-211ENST00000506575 hADV38S2A0JD32 116 aa12.71□□□□□ -0.37
CLDND1-211ENST00000506575 SIRPB1O00241 398 aa12.71□□□□□ -0.37
CLDND1-211ENST00000506575 GPR137BO60478 399 aa12.71□□□□□ -0.37
CLDND1-211ENST00000506575 IGKV1D-12P01611 117 aa12.71□□□□□ -0.37
CLDND1-211ENST00000506575 GNAO1P09471 354 aa12.71□□□□□ -0.37
CLDND1-211ENST00000506575 ZNF728P0DKX0 622 aa12.71□□□□□ -0.37
CLDND1-211ENST00000506575 MDKP21741 143 aaPredicted RBP12.71□□□□□ -0.37
CLDND1-211ENST00000506575 COX7A1P24310 79 aa12.71□□□□□ -0.37
CLDND1-211ENST00000506575 LGALS4P56470 323 aa12.71□□□□□ -0.37
CLDND1-211ENST00000506575 ST3GAL4Q11206 333 aa12.71□□□□□ -0.37
CLDND1-211ENST00000506575 XAF1Q6GPH4 301 aa12.71□□□□□ -0.37
CLDND1-211ENST00000506575 HCP5Q6MZN7 132 aa12.71□□□□□ -0.37
CLDND1-211ENST00000506575 ZNF782Q6ZMW2 699 aaPredicted RBP12.71□□□□□ -0.37
CLDND1-211ENST00000506575 RNF144BQ7Z419 303 aa12.71□□□□□ -0.37
CLDND1-211ENST00000506575 SATL1Q86VE3 508 aa12.71□□□□□ -0.37
CLDND1-211ENST00000506575 OR52N1Q8NH53 320 aa12.71□□□□□ -0.37
CLDND1-211ENST00000506575 GGHQ92820 318 aa12.71□□□□□ -0.37
CLDND1-211ENST00000506575 SMIM19Q96E16 107 aa12.71□□□□□ -0.37
CLDND1-211ENST00000506575 C1RLQ9NZP8 487 aa12.71□□□□□ -0.37
CLDND1-211ENST00000506575 CLEC2DQ9UHP7 191 aa12.71□□□□□ -0.37
CLDND1-211ENST00000506575 MEX3AA1L020 520 aaKnown RBP12.7□□□□□ -0.38
CLDND1-211ENST00000506575 C17orf98A8MV24 154 aa12.7□□□□□ -0.38
CLDND1-211ENST00000506575 MGST3O14880 152 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms