RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 RASSF2P50749 326 aa10.59□□□□□ -0.71
DDX41-204ENST00000504807 FUT6P51993 359 aa10.59□□□□□ -0.71
DDX41-204ENST00000504807 EDDM3BP56851 147 aa10.59□□□□□ -0.71
DDX41-204ENST00000504807 SNRPGP62308 76 aaKnown RBP10.59□□□□□ -0.71
DDX41-204ENST00000504807 ZNF91Q05481 1191 aa10.59□□□□□ -0.71
DDX41-204ENST00000504807 TMED1Q13445 227 aa10.59□□□□□ -0.71
DDX41-204ENST00000504807 EDDM3AQ14507 147 aa10.59□□□□□ -0.71
DDX41-204ENST00000504807 SLC25A30Q5SVS4 291 aa10.59□□□□□ -0.71
DDX41-204ENST00000504807 FDX2Q6P4F2 183 aa10.59□□□□□ -0.71
DDX41-204ENST00000504807 TMEM219Q86XT9 240 aa10.59□□□□□ -0.71
DDX41-204ENST00000504807 EGFL6Q8IUX8 553 aa10.59□□□□□ -0.71
DDX41-204ENST00000504807 ENTHD1Q8IYW4 607 aa10.59□□□□□ -0.71
DDX41-204ENST00000504807 OR8H2Q8N162 312 aa10.59□□□□□ -0.71
DDX41-204ENST00000504807 SGCDQ92629 289 aa10.59□□□□□ -0.71
DDX41-204ENST00000504807 EMG1Q92979 244 aaKnown RBP10.59□□□□□ -0.71
DDX41-204ENST00000504807 ZNF702PQ9H963 129 aa10.59□□□□□ -0.71
DDX41-204ENST00000504807 FBLN5Q9UBX5 448 aa10.59□□□□□ -0.71
DDX41-204ENST00000504807 SLC7A11Q9UPY5 501 aa10.59□□□□□ -0.71
DDX41-204ENST00000504807 EXOGQ9Y2C4 368 aaKnown RBP10.59□□□□□ -0.71
DDX41-204ENST00000504807 NOTCH3Q9UM47 2321 aa10.59□□□□□ -0.71
DDX41-204ENST00000504807 TENM2Q9NT68 2774 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 SLC16A6O15403 523 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 CHRM2P08172 466 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 UBCP0CG48 685 aaKnown RBP10.58□□□□□ -0.72
DDX41-204ENST00000504807 ZNF728P0DKX0 622 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 ATF1P18846 271 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 GABRA5P31644 462 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 ATP6V1E1P36543 226 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 POU3F4P49335 361 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 ALDH3A2P51648 485 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 CDC42P60953 191 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 ZNF626Q68DY1 528 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 LYG1Q8N1E2 194 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 OR11H6Q8NGC7 330 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 OR5D18Q8NGL1 313 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 APH1BQ8WW43 257 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 CFHR4Q92496 578 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 BORCS8Q96FH0 119 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 C4orf36Q96KX1 117 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 NKX3-1Q99801 234 aaPredicted RBP10.58□□□□□ -0.72
DDX41-204ENST00000504807 HEXA-AS1Q9H8Q6 139 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 AMBNQ9NP70 447 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 SERTAD4Q9NUC0 356 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 ENOPH1Q9UHY7 261 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 SACSQ9NZJ4 4579 aa10.58□□□□□ -0.72
DDX41-204ENST00000504807 TRBV2A0A0J9YWF9 115 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 DAPL1A0PJW8 107 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 A6NDX4 124 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 VGLL3A8MV65 326 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 J3QLW9 94 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 CIB2O75838 187 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 GATBO75879 557 aaKnown RBP10.57□□□□□ -0.72
DDX41-204ENST00000504807 OPN1MWP04001 364 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 ARG1P05089 322 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 ISG15P05161 165 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 OPN1MW2P0DN77 364 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 OPN1MW3P0DN78 364 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 DBTP11182 482 aaKnown RBP10.57□□□□□ -0.72
DDX41-204ENST00000504807 ZNF19P17023 458 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 KIR2DS4P43632 304 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 PDZK1IP1Q13113 114 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 GRK1Q15835 563 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 SSX2Q16385 188 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 XAF1Q6GPH4 301 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 UTS2BQ765I0 119 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 LHFPL3Q86UP9 236 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 FAM58AQ8N1B3 248 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 KLHDC1Q8N7A1 406 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 DNAAF1Q8NEP3 725 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 OR13C9Q8NGT0 318 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 WIPF2Q8TF74 440 aaPredicted RBP10.57□□□□□ -0.72
DDX41-204ENST00000504807 PP6455Q8WZ26 134 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 RGP1Q92546 391 aaPredicted RBP10.57□□□□□ -0.72
DDX41-204ENST00000504807 RFKQ969G6 155 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 SNX22Q96L94 193 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 NECAP2Q9NVZ3 263 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 IMPAD1Q9NX62 359 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 ZNF581Q9P0T4 197 aa10.57□□□□□ -0.72
DDX41-204ENST00000504807 FAM172BPA6NC97 362 aa10.56□□□□□ -0.72
DDX41-204ENST00000504807 SIRPB1O00241 398 aa10.56□□□□□ -0.72
DDX41-204ENST00000504807 PRKACAP17612 351 aa10.56□□□□□ -0.72
DDX41-204ENST00000504807 GABRR1P24046 479 aa10.56□□□□□ -0.72
DDX41-204ENST00000504807 RBP2P50120 134 aa10.56□□□□□ -0.72
DDX41-204ENST00000504807 MTCP1P56278 107 aa10.56□□□□□ -0.72
DDX41-204ENST00000504807 ACTA2P62736 377 aa10.56□□□□□ -0.72
DDX41-204ENST00000504807 ACTG2P63267 376 aa10.56□□□□□ -0.72
DDX41-204ENST00000504807 ACTC1P68032 377 aa10.56□□□□□ -0.72
DDX41-204ENST00000504807 ACTA1P68133 377 aa10.56□□□□□ -0.72
DDX41-204ENST00000504807 IL18R1Q13478 541 aa10.56□□□□□ -0.72
DDX41-204ENST00000504807 ZNF146Q15072 292 aa10.56□□□□□ -0.72
DDX41-204ENST00000504807 AANATQ16613 207 aa10.56□□□□□ -0.72
DDX41-204ENST00000504807 SMN1Q16637 294 aaKnown RBP10.56□□□□□ -0.72
DDX41-204ENST00000504807 TMEM95Q3KNT9 176 aa10.56□□□□□ -0.72
DDX41-204ENST00000504807 OXLD1Q5BKU9 147 aa10.56□□□□□ -0.72
DDX41-204ENST00000504807 TMEM244Q5VVB8 128 aa10.56□□□□□ -0.72
DDX41-204ENST00000504807 GDPD3Q7L5L3 318 aa10.56□□□□□ -0.72
DDX41-204ENST00000504807 FAM220AQ7Z4H9 259 aa10.56□□□□□ -0.72
DDX41-204ENST00000504807 TRUB1Q8WWH5 349 aaKnown RBP10.56□□□□□ -0.72
DDX41-204ENST00000504807 HMG20AQ9NP66 347 aa10.56□□□□□ -0.72
DDX41-204ENST00000504807 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms