RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 FBXL13Q8NEE6 735 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 OR52K2Q8NGK3 314 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 OR8D4Q8NGM9 314 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 OR2T4Q8NH00 348 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 OR5K1Q8NHB7 308 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 CLHC1Q8NHS4 586 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 RNASE11Q8TAA1 199 aaKnown RBP1.68□□□□□ -2.14
ATXN3-208ENST00000504047 SYNPRQ8TBG9 265 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 AGR3Q8TD06 166 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 GLYATL2Q8WU03 294 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 SMARCD2Q92925 531 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 CPNE4Q96A23 557 aaPredicted RBP1.68□□□□□ -2.14
ATXN3-208ENST00000504047 LRRC58Q96CX6 371 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 CERS2Q96G23 380 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 NARS2Q96I59 477 aaKnown RBP1.68□□□□□ -2.14
ATXN3-208ENST00000504047 CPB2Q96IY4 423 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 PPP1R36Q96LQ0 422 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 Q96MT0 163 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 COL21A1Q96P44 957 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 OXGR1Q96P68 337 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 MCEEQ96PE7 176 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 ERMAPQ96PL5 475 aaPredicted RBP1.68□□□□□ -2.14
ATXN3-208ENST00000504047 SLC38A2Q96QD8 506 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 ZBTB18Q99592 522 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 GPR22Q99680 433 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 MRPL57Q9BQC6 102 aaKnown RBP1.68□□□□□ -2.14
ATXN3-208ENST00000504047 COPS4Q9BT78 406 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 PDCD10Q9BUL8 212 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 TAPBPLQ9BX59 468 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 NKX6-2Q9C056 277 aaPredicted RBP1.68□□□□□ -2.14
ATXN3-208ENST00000504047 ZYG11BQ9C0D3 744 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 ZNF436Q9C0F3 470 aaPredicted RBP1.68□□□□□ -2.14
ATXN3-208ENST00000504047 OR51E2Q9H255 320 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 LINC00597Q9H2U6 94 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 DHX35Q9H5Z1 703 aaKnown RBP1.68□□□□□ -2.14
ATXN3-208ENST00000504047 C11orf49Q9H6J7 331 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 NOX3Q9HBY0 568 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 IMP3Q9NV31 184 aaKnown RBP1.68□□□□□ -2.14
ATXN3-208ENST00000504047 CCDC167Q9P0B6 97 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 DUX4Q9UBX2 424 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 OPN4Q9UHM6 478 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 CLEC4AQ9UMR7 237 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 BTRCQ9Y297 605 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 SAMHD1Q9Y3Z3 626 aaKnown RBP1.68□□□□□ -2.14
ATXN3-208ENST00000504047 SBF2Q86WG5 1849 aa1.68□□□□□ -2.14
ATXN3-208ENST00000504047 BAZ2BQ9UIF8 2168 aaKnown RBP1.68□□□□□ -2.14
ATXN3-208ENST00000504047 DICER1Q9UPY3 1922 aaKnown RBP1.68□□□□□ -2.14
ATXN3-208ENST00000504047 KIF26AQ9ULI4 1882 aaPredicted RBP1.67□□□□□ -2.14
ATXN3-208ENST00000504047 SHANK3Q9BYB0 1731 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 TRAV40A0A0B4J280 105 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 IGHV3-66A0A0C4DH42 116 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 FAM240BA0A1B0GVZ2 78 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 C9orf170A2RU37 121 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 FABP12A6NFH5 140 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 OR5B21A6NL26 309 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 D6RAR5 112 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 ZNF670-ZNF695F2Z2N8 137 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 INMT-MINDY4F8WBC2 141 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 INS-IGF2F8WCM5 200 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 GNGT2O14610 69 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 PRRG1O14668 218 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 ARPC3O15145 178 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 CASC3O15234 703 aaKnown RBP1.67□□□□□ -2.14
ATXN3-208ENST00000504047 LYRM1O43325 122 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 CHMP2AO43633 222 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 RAD1O60671 282 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 HPGDSO60760 199 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 RAMP3O60896 148 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 WBP4O75554 376 aaKnown RBP1.67□□□□□ -2.14
ATXN3-208ENST00000504047 CRTAPO75718 401 aaPredicted RBP1.67□□□□□ -2.14
ATXN3-208ENST00000504047 POP7O75817 140 aaKnown RBP1.67□□□□□ -2.14
ATXN3-208ENST00000504047 SCELO95171 688 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 VAMP5O95183 116 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 GADD45GO95257 159 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 CFDP00746 253 aaPredicted RBP1.67□□□□□ -2.14
ATXN3-208ENST00000504047 CST1P01037 141 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 IFNA10P01566 189 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 IFNGP01579 166 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 HEXBP07686 556 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 TSPAN19P0C672 248 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 SULT1A3P0DMM9 295 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 SULT1A4P0DMN0 295 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 COX5BP10606 129 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 MUC1P15941 1255 aaPredicted RBP1.67□□□□□ -2.14
ATXN3-208ENST00000504047 NCK1P16333 377 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 RAB3BP20337 219 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 PVALBP20472 110 aaPredicted RBP1.67□□□□□ -2.14
ATXN3-208ENST00000504047 SLC2A5P22732 501 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 WARSP23381 471 aaKnown RBP1.67□□□□□ -2.14
ATXN3-208ENST00000504047 PAX6P26367 422 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 LCN1P31025 176 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 GDI1P31150 447 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 SDC2P34741 201 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 GPX4P36969 197 aaPredicted RBP1.67□□□□□ -2.14
ATXN3-208ENST00000504047 CD79BP40259 229 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 ACAA2P42765 397 aaKnown RBP1.67□□□□□ -2.14
ATXN3-208ENST00000504047 MAGEA2P43356 314 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 HNMTP50135 292 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 RORCP51449 518 aa1.67□□□□□ -2.14
ATXN3-208ENST00000504047 ACLYP53396 1101 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms