RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 OR4C45A6NMZ5 311 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 PSPNO60542 156 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 IGKV1D-12P01611 117 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 HTR1AP08908 422 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 IGHV1-8P0DP01 117 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 CALCBP10092 127 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 ZNF20P17024 532 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 ATF1P18846 271 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 DUSP1P28562 367 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 CCR9P51686 369 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 ATP1B3P54709 279 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 EDDM3AQ14507 147 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 ZNF146Q15072 292 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 PLA1AQ53H76 456 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 ZNF626Q68DY1 528 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 GDPD3Q7L5L3 318 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 KCTD20Q7Z5Y7 419 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 Q8IYB0 196 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 FAM58AQ8N1B3 248 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 RFT1Q96AA3 541 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 C4orf36Q96KX1 117 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 OPALINQ96PE5 141 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 ZNF649Q9BS31 505 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 SEBOXQ9HB31 216 aaPredicted RBP11.55□□□□□ -0.56
VTI1A-209ENST00000496445 GMPPBQ9Y5P6 360 aa11.55□□□□□ -0.56
VTI1A-209ENST00000496445 VGLL3A8MV65 326 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 J3QLW9 94 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 ARG1P05089 322 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 DBTP11182 482 aaKnown RBP11.54□□□□□ -0.56
VTI1A-209ENST00000496445 ZNF19P17023 458 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 PRKACAP17612 351 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 SNU13P55769 128 aaKnown RBP11.54□□□□□ -0.56
VTI1A-209ENST00000496445 MTCP1P56278 107 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 LGALS4P56470 323 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 ACTA2P62736 377 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 ACTG2P63267 376 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 GRK1Q15835 563 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 HIST2H2BDQ6DRA6 164 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 LHFPL2Q6ZUX7 228 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 ACBD7Q8N6N7 88 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 OR4S1Q8NGB4 309 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 OR11H6Q8NGC7 330 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 OR13C9Q8NGT0 318 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 OR13D1Q8NGV5 346 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 SPSB1Q96BD6 273 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 KCTD12Q96CX2 325 aaKnown RBP11.54□□□□□ -0.56
VTI1A-209ENST00000496445 ZNF714Q96N38 554 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 SPACA5Q96QH8 159 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 SLC29A1Q99808 456 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 ALG8Q9BVK2 526 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 RANBP3Q9H6Z4 567 aaPredicted RBP11.54□□□□□ -0.56
VTI1A-209ENST00000496445 ISG20L2Q9H9L3 353 aaKnown RBP11.54□□□□□ -0.56
VTI1A-209ENST00000496445 HHLA2Q9UM44 414 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 MYRFQ9Y2G1 1151 aa11.54□□□□□ -0.56
VTI1A-209ENST00000496445 TBL2Q9Y4P3 447 aaKnown RBP11.54□□□□□ -0.56
VTI1A-209ENST00000496445 PRKACBP22694 351 aa11.53□□□□□ -0.56
VTI1A-209ENST00000496445 GABRR1P24046 479 aa11.53□□□□□ -0.56
VTI1A-209ENST00000496445 PEX2P28328 305 aa11.53□□□□□ -0.56
VTI1A-209ENST00000496445 KIR2DS4P43632 304 aa11.53□□□□□ -0.56
VTI1A-209ENST00000496445 OR3A1P47881 315 aa11.53□□□□□ -0.56
VTI1A-209ENST00000496445 RAB13P51153 203 aa11.53□□□□□ -0.56
VTI1A-209ENST00000496445 MEF2CQ06413 473 aaPredicted RBP11.53□□□□□ -0.56
VTI1A-209ENST00000496445 PDZK1IP1Q13113 114 aa11.53□□□□□ -0.56
VTI1A-209ENST00000496445 ALKBH1Q13686 389 aaKnown RBP11.53□□□□□ -0.56
VTI1A-209ENST00000496445 PDLIM3Q53GG5 364 aaPredicted RBP11.53□□□□□ -0.56
VTI1A-209ENST00000496445 SPIN3Q5JUX0 258 aa11.53□□□□□ -0.56
VTI1A-209ENST00000496445 CCBE1Q6UXH8 406 aaPredicted RBP11.53□□□□□ -0.56
VTI1A-209ENST00000496445 LIAT1Q6ZQX7 453 aa11.53□□□□□ -0.56
VTI1A-209ENST00000496445 CCDC121Q6ZUS5 278 aa11.53□□□□□ -0.56
VTI1A-209ENST00000496445 LHFPL3Q86UP9 236 aa11.53□□□□□ -0.56
VTI1A-209ENST00000496445 OR5D18Q8NGL1 313 aa11.53□□□□□ -0.56
VTI1A-209ENST00000496445 OR4C13Q8NGP0 309 aa11.53□□□□□ -0.56
VTI1A-209ENST00000496445 OR13C3Q8NGS6 347 aa11.53□□□□□ -0.56
VTI1A-209ENST00000496445 APH1BQ8WW43 257 aa11.53□□□□□ -0.56
VTI1A-209ENST00000496445 FOXRED1Q96CU9 486 aaPredicted RBP11.53□□□□□ -0.56
VTI1A-209ENST00000496445 HMG20AQ9NP66 347 aa11.53□□□□□ -0.56
VTI1A-209ENST00000496445 RAB18Q9NP72 206 aa11.53□□□□□ -0.56
VTI1A-209ENST00000496445 FOXJ3Q9UPW0 622 aa11.53□□□□□ -0.56
VTI1A-209ENST00000496445 TCF19Q9Y242 345 aa11.53□□□□□ -0.56
VTI1A-209ENST00000496445 LINC00312Q9Y6C7 94 aa11.53□□□□□ -0.56
VTI1A-209ENST00000496445 hADV38S2A0JD32 116 aa11.52□□□□□ -0.57
VTI1A-209ENST00000496445 SIRPB1O00241 398 aa11.52□□□□□ -0.57
VTI1A-209ENST00000496445 MMP23AO75900 390 aa11.52□□□□□ -0.57
VTI1A-209ENST00000496445 KDM4BO94953 1096 aa11.52□□□□□ -0.57
VTI1A-209ENST00000496445 CYB5AP00167 134 aa11.52□□□□□ -0.57
VTI1A-209ENST00000496445 MT-ND2P03891 347 aa11.52□□□□□ -0.57
VTI1A-209ENST00000496445 JUNBP17275 347 aaPredicted RBP11.52□□□□□ -0.57
VTI1A-209ENST00000496445 P2RX3P56373 397 aa11.52□□□□□ -0.57
VTI1A-209ENST00000496445 GALEQ14376 348 aa11.52□□□□□ -0.57
VTI1A-209ENST00000496445 C2orf68Q2NKX9 166 aa11.52□□□□□ -0.57
VTI1A-209ENST00000496445 KIAA2026Q5HYC2 2103 aa11.52□□□□□ -0.57
VTI1A-209ENST00000496445 SYS1Q8N2H4 156 aa11.52□□□□□ -0.57
VTI1A-209ENST00000496445 KLHDC1Q8N7A1 406 aa11.52□□□□□ -0.57
VTI1A-209ENST00000496445 ZNF676Q8N7Q3 588 aa11.52□□□□□ -0.57
VTI1A-209ENST00000496445 RHOXF1Q8NHV9 184 aa11.52□□□□□ -0.57
VTI1A-209ENST00000496445 C9orf16Q9BUW7 83 aa11.52□□□□□ -0.57
VTI1A-209ENST00000496445 COMMD4Q9H0A8 199 aa11.52□□□□□ -0.57
VTI1A-209ENST00000496445 ZNF702PQ9H963 129 aa11.52□□□□□ -0.57
VTI1A-209ENST00000496445 S100A14Q9HCY8 104 aa11.52□□□□□ -0.57
VTI1A-209ENST00000496445 AMBNQ9NP70 447 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms