RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ZSCAN26Q16670 478 aa25.52■■□□□ 1.68
LDB1-204ENST00000490751 STMN2Q93045 179 aa25.52■■□□□ 1.68
LDB1-204ENST00000490751 SSX3Q99909 188 aa25.52■■□□□ 1.68
LDB1-204ENST00000490751 SEBOXQ9HB31 216 aaPredicted RBP25.52■■□□□ 1.68
LDB1-204ENST00000490751 MRPS18AQ9NVS2 196 aaKnown RBP25.52■■□□□ 1.68
LDB1-204ENST00000490751 SMPD3Q9NY59 655 aaPredicted RBP25.52■■□□□ 1.68
LDB1-204ENST00000490751 TRRAPQ9Y4A5 3859 aa25.52■■□□□ 1.68
LDB1-204ENST00000490751 CALCBP10092 127 aa25.51■■□□□ 1.67
LDB1-204ENST00000490751 PRKACAP17612 351 aa25.51■■□□□ 1.67
LDB1-204ENST00000490751 DUSP1P28562 367 aa25.51■■□□□ 1.67
LDB1-204ENST00000490751 SNU13P55769 128 aaKnown RBP25.51■■□□□ 1.67
LDB1-204ENST00000490751 PDZK1IP1Q13113 114 aa25.51■■□□□ 1.67
LDB1-204ENST00000490751 EDDM3AQ14507 147 aa25.51■■□□□ 1.67
LDB1-204ENST00000490751 BRICD5Q6PL45 260 aa25.51■■□□□ 1.67
LDB1-204ENST00000490751 ZNF555Q8NEP9 628 aa25.51■■□□□ 1.67
LDB1-204ENST00000490751 SPACA5Q96QH8 159 aa25.51■■□□□ 1.67
LDB1-204ENST00000490751 E9PI62 339 aa25.5■■□□□ 1.67
LDB1-204ENST00000490751 PAX6P26367 422 aa25.5■■□□□ 1.67
LDB1-204ENST00000490751 MRPL28Q13084 256 aaKnown RBP25.5■■□□□ 1.67
LDB1-204ENST00000490751 KLHL22Q53GT1 634 aa25.5■■□□□ 1.67
LDB1-204ENST00000490751 RNF144BQ7Z419 303 aa25.5■■□□□ 1.67
LDB1-204ENST00000490751 OR52N4Q8NGI2 321 aa25.5■■□□□ 1.67
LDB1-204ENST00000490751 RDH12Q96NR8 316 aa25.5■■□□□ 1.67
LDB1-204ENST00000490751 CHST6Q9GZX3 395 aa25.5■■□□□ 1.67
LDB1-204ENST00000490751 MEGF9Q9H1U4 602 aa25.5■■□□□ 1.67
LDB1-204ENST00000490751 ZCCHC4Q9H5U6 513 aa25.5■■□□□ 1.67
LDB1-204ENST00000490751 ZFPL1O95159 310 aa25.49■■□□□ 1.67
LDB1-204ENST00000490751 MT-ND2P03891 347 aa25.49■■□□□ 1.67
LDB1-204ENST00000490751 ZNF728P0DKX0 622 aa25.49■■□□□ 1.67
LDB1-204ENST00000490751 GABRR1P24046 479 aa25.49■■□□□ 1.67
LDB1-204ENST00000490751 TGFBR2P37173 567 aa25.49■■□□□ 1.67
LDB1-204ENST00000490751 LGALS4P56470 323 aa25.49■■□□□ 1.67
LDB1-204ENST00000490751 ZNF146Q15072 292 aa25.49■■□□□ 1.67
LDB1-204ENST00000490751 GRK1Q15835 563 aa25.49■■□□□ 1.67
LDB1-204ENST00000490751 LRRC75BQ2VPJ9 315 aa25.49■■□□□ 1.67
LDB1-204ENST00000490751 TCF23Q7RTU1 214 aa25.49■■□□□ 1.67
LDB1-204ENST00000490751 OR5D18Q8NGL1 313 aa25.49■■□□□ 1.67
LDB1-204ENST00000490751 CITED1Q99966 193 aa25.49■■□□□ 1.67
LDB1-204ENST00000490751 PPA2Q9H2U2 334 aa25.49■■□□□ 1.67
LDB1-204ENST00000490751 IGKV1-12A0A0C4DH73 117 aa25.48■■□□□ 1.67
LDB1-204ENST00000490751 TMEM212A6NML5 194 aa25.48■■□□□ 1.67
LDB1-204ENST00000490751 PSPNO60542 156 aa25.48■■□□□ 1.67
LDB1-204ENST00000490751 IGKV1D-12P01611 117 aa25.48■■□□□ 1.67
LDB1-204ENST00000490751 CCDC159P0C7I6 412 aa25.48■■□□□ 1.67
LDB1-204ENST00000490751 PEX2P28328 305 aa25.48■■□□□ 1.67
LDB1-204ENST00000490751 GBX2P52951 348 aaPredicted RBP25.48■■□□□ 1.67
LDB1-204ENST00000490751 PROK1P58294 105 aa25.48■■□□□ 1.67
LDB1-204ENST00000490751 KRTAP10-3P60369 221 aa25.48■■□□□ 1.67
LDB1-204ENST00000490751 MEF2CQ06413 473 aaPredicted RBP25.48■■□□□ 1.67
LDB1-204ENST00000490751 SMN1Q16637 294 aaKnown RBP25.48■■□□□ 1.67
LDB1-204ENST00000490751 SPIN3Q5JUX0 258 aa25.48■■□□□ 1.67
LDB1-204ENST00000490751 TPRX1Q8N7U7 411 aa25.48■■□□□ 1.67
LDB1-204ENST00000490751 OR5AK2Q8NH90 309 aa25.48■■□□□ 1.67
LDB1-204ENST00000490751 ZNF714Q96N38 554 aa25.48■■□□□ 1.67
LDB1-204ENST00000490751 PDCD1LG2Q9BQ51 273 aa25.48■■□□□ 1.67
LDB1-204ENST00000490751 COMMD4Q9H0A8 199 aa25.48■■□□□ 1.67
LDB1-204ENST00000490751 C16orf95Q9H693 158 aa25.48■■□□□ 1.67
LDB1-204ENST00000490751 HMG20AQ9NP66 347 aa25.48■■□□□ 1.67
LDB1-204ENST00000490751 PKD1L1Q8TDX9 2849 aa25.48■■□□□ 1.67
LDB1-204ENST00000490751 WBP4O75554 376 aaKnown RBP25.47■■□□□ 1.67
LDB1-204ENST00000490751 RBP4P02753 201 aa25.47■■□□□ 1.67
LDB1-204ENST00000490751 LY6EQ16553 131 aa25.47■■□□□ 1.67
LDB1-204ENST00000490751 LPCAT4Q643R3 524 aa25.47■■□□□ 1.67
LDB1-204ENST00000490751 TREML4Q6UXN2 200 aa25.47■■□□□ 1.67
LDB1-204ENST00000490751 NEK6Q9HC98 313 aa25.47■■□□□ 1.67
LDB1-204ENST00000490751 GLS2Q9UI32 602 aa25.47■■□□□ 1.67
LDB1-204ENST00000490751 hADV38S2A0JD32 116 aa25.46■■□□□ 1.67
LDB1-204ENST00000490751 TSPAN9O75954 239 aa25.46■■□□□ 1.67
LDB1-204ENST00000490751 CLPXO76031 633 aa25.46■■□□□ 1.67
LDB1-204ENST00000490751 KDM4BO94953 1096 aa25.46■■□□□ 1.67
LDB1-204ENST00000490751 RPSAP08865 295 aaKnown RBP25.46■■□□□ 1.67
LDB1-204ENST00000490751 LIMS3P0CW19 117 aa25.46■■□□□ 1.67
LDB1-204ENST00000490751 LIMS4P0CW20 117 aa25.46■■□□□ 1.67
LDB1-204ENST00000490751 AANATQ16613 207 aa25.46■■□□□ 1.67
LDB1-204ENST00000490751 LHFPL4Q7Z7J7 247 aa25.46■■□□□ 1.67
LDB1-204ENST00000490751 OR4S1Q8NGB4 309 aa25.46■■□□□ 1.67
LDB1-204ENST00000490751 OR13D1Q8NGV5 346 aa25.46■■□□□ 1.67
LDB1-204ENST00000490751 TSEN15Q8WW01 171 aaKnown RBP25.46■■□□□ 1.67
LDB1-204ENST00000490751 FGF20Q9NP95 211 aaPredicted RBP25.46■■□□□ 1.67
LDB1-204ENST00000490751 DHDHQ9UQ10 334 aa25.46■■□□□ 1.67
LDB1-204ENST00000490751 GSTK1Q9Y2Q3 226 aa25.46■■□□□ 1.67
LDB1-204ENST00000490751 SIRPB1O00241 398 aa25.45■■□□□ 1.66
LDB1-204ENST00000490751 IGHV1-8P0DP01 117 aa25.45■■□□□ 1.66
LDB1-204ENST00000490751 CRIP3Q6Q6R5 217 aa25.45■■□□□ 1.66
LDB1-204ENST00000490751 SERPINA12Q8IW75 414 aa25.45■■□□□ 1.66
LDB1-204ENST00000490751 EXOSC4Q9NPD3 245 aaKnown RBP25.45■■□□□ 1.66
LDB1-204ENST00000490751 LINC00312Q9Y6C7 94 aa25.45■■□□□ 1.66
LDB1-204ENST00000490751 MGST3O14880 152 aa25.44■■□□□ 1.66
LDB1-204ENST00000490751 SULT1B1O43704 296 aa25.44■■□□□ 1.66
LDB1-204ENST00000490751 CLIC3O95833 236 aa25.44■■□□□ 1.66
LDB1-204ENST00000490751 ARG1P05089 322 aa25.44■■□□□ 1.66
LDB1-204ENST00000490751 HCKP08631 526 aa25.44■■□□□ 1.66
LDB1-204ENST00000490751 OR3A1P47881 315 aa25.44■■□□□ 1.66
LDB1-204ENST00000490751 GTF2A1P52655 376 aaPredicted RBP25.44■■□□□ 1.66
LDB1-204ENST00000490751 LRRC36Q1X8D7 754 aa25.44■■□□□ 1.66
LDB1-204ENST00000490751 PARP16Q8N5Y8 322 aa25.44■■□□□ 1.66
LDB1-204ENST00000490751 OR5D14Q8NGL3 314 aa25.44■■□□□ 1.66
LDB1-204ENST00000490751 PPP1R35Q8TAP8 253 aa25.44■■□□□ 1.66
LDB1-204ENST00000490751 HAVCR2Q8TDQ0 301 aa25.44■■□□□ 1.66
LDB1-204ENST00000490751 JAM3Q9BX67 310 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms