RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 ZNF735P0CB33 412 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 GABRG2P18507 467 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 PAX6P26367 422 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 P2RY1P47900 373 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 GAMTQ14353 236 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 BIVMQ86UB2 503 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 RTN4RL2Q86UN3 420 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 WDR90Q96KV7 1748 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 A0A096LPE4 126 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 A0A1W2PPZ6 126 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 K7EQS6 105 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 NDUFA2O43678 99 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 DHRS3O75911 302 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 CHRNA7P36544 502 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 FAM3AP98173 230 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 Q6ZS52 159 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 OR10J5Q8NHC4 309 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 GNRHR2Q96P88 292 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 AURKAIP1Q9NWT8 199 aaPredicted RBP11.29□□□□□ -0.6
SHOX2-205ENST00000490689 METTL1Q9UBP6 276 aaKnown RBP11.29□□□□□ -0.6
SHOX2-205ENST00000490689 ZNHIT1O43257 154 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 CHST1O43916 411 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 THBS4P35443 961 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 PDLIM3Q53GG5 364 aaPredicted RBP11.29□□□□□ -0.6
SHOX2-205ENST00000490689 VAX1Q5SQQ9 334 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 LIAT1Q6ZQX7 453 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 OR5AS1Q8N127 324 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 PTX4Q96A99 478 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 KLHDC3Q9BQ90 382 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 G6PC2Q9NQR9 355 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 SNRNP200O75643 2136 aaKnown RBP11.29□□□□□ -0.6
SHOX2-205ENST00000490689 ANKUB1A6NFN9 424 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 DEDDO75618 318 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 IL2RGP31785 369 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 SNCAP37840 140 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 ZXDAP98168 799 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 IL13RA2Q14627 380 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 PIGYQ3MUY2 71 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 PLAC9Q5JTB6 97 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 C9orf40Q8IXQ3 194 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 ZNF808Q8N4W9 903 aaPredicted RBP11.28□□□□□ -0.6
SHOX2-205ENST00000490689 SLC35G3Q8N808 338 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 GPBAR1Q8TDU6 330 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 EXTL1Q92935 676 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 GPR87Q9BY21 358 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 OR51I2Q9H344 312 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 UCK1Q9HA47 277 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 PSENENQ9NZ42 101 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 RNF150Q9ULK6 438 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 UBE2L5PA0A1B0GUS4 154 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 DHRS7CA6NNS2 312 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 COLCA2A8K830 154 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 SSTP61278 116 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 ZNF385CQ66K41 422 aaPredicted RBP11.28□□□□□ -0.6
SHOX2-205ENST00000490689 OR1L3Q8NH93 324 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 FAM103A1Q9BTL3 118 aaKnown RBP11.28□□□□□ -0.6
SHOX2-205ENST00000490689 C8orf33Q9H7E9 229 aaPredicted RBP11.28□□□□□ -0.6
SHOX2-205ENST00000490689 CALHM2Q9HA72 323 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 MSL2Q9HCI7 577 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 A0A1W2PNV4 684 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 ANKRD30BLA7E2S9 258 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 SLC39A7Q92504 469 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 CACFD1Q9UGQ2 172 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 IGKV1D-43A0A0B4J1Z2 117 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 MASP2O00187 686 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 TGOLN2O43493 480 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 DXOO77932 396 aaKnown RBP11.28□□□□□ -0.6
SHOX2-205ENST00000490689 SYNGR4O95473 234 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 PGA4P0DJD7 388 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 PGA5P0DJD9 388 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 DCDP81605 110 aaKnown RBP11.28□□□□□ -0.6
SHOX2-205ENST00000490689 FOXK1P85037 733 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 ZNF774Q6NX45 483 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 POC1AQ8NBT0 407 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 MRGPRX4Q96LA9 322 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 ENY2Q9NPA8 101 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 V9GYS6 101 aa11.28□□□□□ -0.6
SHOX2-205ENST00000490689 SCN5AQ14524 2016 aa11.27□□□□□ -0.6
SHOX2-205ENST00000490689 ROS1P08922 2347 aa11.27□□□□□ -0.6
SHOX2-205ENST00000490689 MDFIC2A0A1B0GVS7 189 aa11.27□□□□□ -0.6
SHOX2-205ENST00000490689 DVL1O14640 695 aa11.27□□□□□ -0.6
SHOX2-205ENST00000490689 CARD18P57730 90 aa11.27□□□□□ -0.6
SHOX2-205ENST00000490689 TEX30Q5JUR7 227 aa11.27□□□□□ -0.6
SHOX2-205ENST00000490689 OR52M1Q8NGK5 317 aa11.27□□□□□ -0.6
SHOX2-205ENST00000490689 TXN2Q99757 166 aa11.27□□□□□ -0.6
SHOX2-205ENST00000490689 PLEKHA3Q9HB20 300 aa11.27□□□□□ -0.6
SHOX2-205ENST00000490689 MRPL33O75394 65 aaKnown RBP11.27□□□□□ -0.61
SHOX2-205ENST00000490689 IL2RAP01589 272 aa11.27□□□□□ -0.61
SHOX2-205ENST00000490689 FUT3P21217 361 aa11.27□□□□□ -0.61
SHOX2-205ENST00000490689 GDF1P27539 372 aa11.27□□□□□ -0.61
SHOX2-205ENST00000490689 HOXC12P31275 282 aa11.27□□□□□ -0.61
SHOX2-205ENST00000490689 WDR25Q64LD2 544 aaPredicted RBP11.27□□□□□ -0.61
SHOX2-205ENST00000490689 LINC00114Q6XXX2 140 aa11.27□□□□□ -0.61
SHOX2-205ENST00000490689 C1QL2Q7Z5L3 287 aa11.27□□□□□ -0.61
SHOX2-205ENST00000490689 IL22RA2Q969J5 263 aa11.27□□□□□ -0.61
SHOX2-205ENST00000490689 WFIKKN1Q96NZ8 548 aa11.27□□□□□ -0.61
SHOX2-205ENST00000490689 P4HTMQ9NXG6 502 aa11.27□□□□□ -0.61
SHOX2-205ENST00000490689 MRPS17Q9Y2R5 130 aaKnown RBP11.27□□□□□ -0.61
SHOX2-205ENST00000490689 TERTO14746 1132 aaKnown RBP11.27□□□□□ -0.61
SHOX2-205ENST00000490689 FGF16O43320 207 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms