RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 PTGFRP43088 359 aa11.94□□□□□ -0.5
HLA-F-229ENST00000489502 COL10A1Q03692 680 aa11.94□□□□□ -0.5
HLA-F-229ENST00000489502 LRRC10Q5BKY1 277 aa11.94□□□□□ -0.5
HLA-F-229ENST00000489502 FIP1L1Q6UN15 594 aaKnown RBP11.94□□□□□ -0.5
HLA-F-229ENST00000489502 BTN2A1Q7KYR7 527 aa11.94□□□□□ -0.5
HLA-F-229ENST00000489502 NKAIN3Q8N8D7 197 aa11.94□□□□□ -0.5
HLA-F-229ENST00000489502 ASCC1Q8N9N2 400 aaKnown RBP11.94□□□□□ -0.5
HLA-F-229ENST00000489502 PNLDC1Q8NA58 520 aaKnown RBP11.94□□□□□ -0.5
HLA-F-229ENST00000489502 PXT1Q8NFP0 134 aa11.94□□□□□ -0.5
HLA-F-229ENST00000489502 NUDT16L1Q9BRJ7 211 aaKnown RBP11.94□□□□□ -0.5
HLA-F-229ENST00000489502 TMPRSS13Q9BYE2 586 aa11.94□□□□□ -0.5
HLA-F-229ENST00000489502 CNTD2Q9H8S5 307 aa11.94□□□□□ -0.5
HLA-F-229ENST00000489502 GSTK1Q9Y2Q3 226 aa11.94□□□□□ -0.5
HLA-F-229ENST00000489502 INSIG2Q9Y5U4 225 aa11.94□□□□□ -0.5
HLA-F-229ENST00000489502 A0A087WXM4 84 aa11.93□□□□□ -0.5
HLA-F-229ENST00000489502 PPIAL4CA0A0B4J2A2 164 aa11.93□□□□□ -0.5
HLA-F-229ENST00000489502 A0A1W2PP11 408 aa11.93□□□□□ -0.5
HLA-F-229ENST00000489502 ENSAO43768 121 aaKnown RBP11.93□□□□□ -0.5
HLA-F-229ENST00000489502 HTR3BO95264 441 aa11.93□□□□□ -0.5
HLA-F-229ENST00000489502 CALRP27797 417 aaKnown RBP11.93□□□□□ -0.5
HLA-F-229ENST00000489502 RSU1Q15404 277 aa11.93□□□□□ -0.5
HLA-F-229ENST00000489502 PIGYQ3MUY2 71 aa11.93□□□□□ -0.5
HLA-F-229ENST00000489502 AWAT2Q6E213 333 aa11.93□□□□□ -0.5
HLA-F-229ENST00000489502 C1orf229Q6ZS94 237 aaPredicted RBP11.93□□□□□ -0.5
HLA-F-229ENST00000489502 OR4D6Q8NGJ1 314 aa11.93□□□□□ -0.5
HLA-F-229ENST00000489502 RAB40AQ8WXH6 277 aa11.93□□□□□ -0.5
HLA-F-229ENST00000489502 PHYHIPQ92561 330 aa11.93□□□□□ -0.5
HLA-F-229ENST00000489502 MED30Q96HR3 178 aa11.93□□□□□ -0.5
HLA-F-229ENST00000489502 SHARPINQ9H0F6 387 aa11.93□□□□□ -0.5
HLA-F-229ENST00000489502 ING4Q9UNL4 249 aa11.93□□□□□ -0.5
HLA-F-229ENST00000489502 MRPS28Q9Y2Q9 187 aaKnown RBP11.93□□□□□ -0.5
HLA-F-229ENST00000489502 SIRPB1O00241 398 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 CRLF1O75462 422 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 ARL6IP5O75915 188 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 SMIM18P0DKX4 95 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 SRMP19623 302 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 SERPINA2P20848 420 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 MTNR1BP49286 362 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 FGF12P61328 243 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 PDCD1Q15116 288 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 SLC22A6Q4U2R8 563 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 SPIN3Q5JUX0 258 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 SYT6Q5T7P8 510 aaPredicted RBP11.92□□□□□ -0.5
HLA-F-229ENST00000489502 CD200R1LQ6Q8B3 271 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 BTNL3Q6UXE8 466 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 LYPD6Q86Y78 171 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 ZNF561Q8N587 486 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 NR1H4Q96RI1 486 aaPredicted RBP11.92□□□□□ -0.5
HLA-F-229ENST00000489502 GFI1Q99684 422 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 SLITRK2Q9H156 845 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 C7orf69Q9H7B7 122 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 EXOSC4Q9NPD3 245 aaKnown RBP11.92□□□□□ -0.5
HLA-F-229ENST00000489502 TMEM160Q9NX00 188 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 OPN4Q9UHM6 478 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 RPUSD1Q9UJJ7 312 aaKnown RBP11.92□□□□□ -0.5
HLA-F-229ENST00000489502 CDC42EP3Q9UKI2 254 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 SVEP1Q4LDE5 3571 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 MXRA5Q9NR99 2828 aa11.92□□□□□ -0.5
HLA-F-229ENST00000489502 ZFHX3Q15911 3703 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 SHISA3A0PJX4 238 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 TMEM82A0PJX8 343 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 J3QLI3 93 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 ZNF737O75373 536 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 OR2H2O95918 312 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 ZNF44P15621 663 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 HNF1AP20823 631 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 GATA3P23771 443 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 GABRR1P24046 479 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 CAV3P56539 151 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 ZNF146Q15072 292 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 CHRFAM7AQ494W8 412 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 CD276Q5ZPR3 534 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 C22orf42Q6IC83 251 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 GLIPR1L1Q6UWM5 242 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 ASCL4Q6XD76 172 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 C1orf147Q96MC9 270 aaPredicted RBP11.91□□□□□ -0.5
HLA-F-229ENST00000489502 S100A13Q99584 98 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 DCTN5Q9BTE1 182 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 MRI1Q9BV20 369 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 BEX2Q9BXY8 128 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 CHST6Q9GZX3 395 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 METTL9Q9H1A3 318 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 OR51E2Q9H255 320 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 KCNK15Q9H427 330 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 VCX3AQ9NNX9 186 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 ZNF581Q9P0T4 197 aa11.91□□□□□ -0.5
HLA-F-229ENST00000489502 AK6Q9Y3D8 172 aaKnown RBP11.91□□□□□ -0.5
HLA-F-229ENST00000489502 KIR2DS1A0A191URI9 304 aa11.9□□□□□ -0.5
HLA-F-229ENST00000489502 TRDV1A0A1B0GX56 115 aa11.9□□□□□ -0.5
HLA-F-229ENST00000489502 MEX3AA1L020 520 aaKnown RBP11.9□□□□□ -0.5
HLA-F-229ENST00000489502 MEGF11A6BM72 1044 aa11.9□□□□□ -0.5
HLA-F-229ENST00000489502 HSPB6O14558 160 aa11.9□□□□□ -0.5
HLA-F-229ENST00000489502 PSPNO60542 156 aa11.9□□□□□ -0.5
HLA-F-229ENST00000489502 TK1P04183 234 aa11.9□□□□□ -0.5
HLA-F-229ENST00000489502 CHRM2P08172 466 aa11.9□□□□□ -0.5
HLA-F-229ENST00000489502 GADD45AP24522 165 aa11.9□□□□□ -0.5
HLA-F-229ENST00000489502 SRP14P37108 136 aaKnown RBP11.9□□□□□ -0.5
HLA-F-229ENST00000489502 OR3A1P47881 315 aa11.9□□□□□ -0.5
HLA-F-229ENST00000489502 PAX8Q06710 450 aa11.9□□□□□ -0.5
HLA-F-229ENST00000489502 SCN1BQ07699 218 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms