RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 CEACAM16Q2WEN9 425 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 ACTL10Q5JWF8 245 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 LDLRAD2Q5SZI1 272 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 MRPL2Q5T653 305 aaKnown RBP1.3□□□□□ -2.2
GCFC2-209ENST00000486016 UGT2A3Q6UWM9 527 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 CLEC18BQ6UXF7 455 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 FAM19A1Q7Z5A9 133 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 TMEM144Q7Z5S9 345 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 ZNF664Q8N3J9 261 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 OR51Q1Q8NH59 317 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 UBA3Q8TBC4 463 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 LGALS14Q8TCE9 139 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 DOK4Q8TEW6 326 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 C22orf15Q8WYQ4 148 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 YIPF5Q969M3 257 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 LRRC39Q96DD0 335 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 TVP23CQ96ET8 276 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 GLT1D1Q96MS3 346 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 VAT1Q99536 393 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 HINT2Q9BX68 163 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 SRRQ9GZT4 340 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 NLE1Q9NVX2 485 aaPredicted RBP1.3□□□□□ -2.2
GCFC2-209ENST00000486016 TAS2R1Q9NYW7 299 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 TAC3Q9UHF0 121 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 RBMX2Q9Y388 322 aaKnown RBP1.3□□□□□ -2.2
GCFC2-209ENST00000486016 TMEM131Q92545 1883 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 THADAQ6YHU6 1953 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 IGKV1OR2-108A0A075B7D4 117 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 GMNCA6NCL1 334 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 IGLL5B9A064 214 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 C4orf51C9J302 202 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 ISLRO14498 428 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 RGS5O15539 181 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 COX7A2P2O60397 106 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 ZMPSTE24O75844 475 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 CCDC172P0C7W6 258 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 HRES1P13985 223 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 CCNOP22674 350 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 ACOT2P49753 483 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 NUDT2P50583 147 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 C2orf80Q0P641 193 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 STX4Q12846 297 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 BIKQ13323 160 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 TNXAQ16473 311 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 TMEM241Q24JQ0 296 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 ATP6AP1LQ52LC2 224 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 CLEC12AQ5QGZ9 265 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 LIN9Q5TKA1 542 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 RESP18Q5W5W9 173 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 LINC00596Q86U02 117 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 CYP4Z1Q86W10 505 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 OR2K2Q8NGT1 345 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 CLHC1Q8NHS4 586 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 ZNF396Q96N95 335 aaPredicted RBP1.29□□□□□ -2.2
GCFC2-209ENST00000486016 OR2V2Q96R30 315 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 CIB1Q99828 191 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 TM2D3Q9BRN9 247 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 COPS4Q9BT78 406 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 SDHAF3Q9NRP4 125 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 RMND1Q9NWS8 449 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 RBM12B-AS1Q9P1G2 102 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 ZNF706Q9Y5V0 76 aaPredicted RBP1.29□□□□□ -2.2
GCFC2-209ENST00000486016 R4GN34 69 aa1.29□□□□□ -2.2
GCFC2-209ENST00000486016 BAZ1BQ9UIG0 1483 aaKnown RBP1.29□□□□□ -2.2
GCFC2-209ENST00000486016 RAB19A4D1S5 217 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 RBFOX3A6NFN3 312 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 MGAT4DA6NG13 374 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 H3BQ85 93 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 BOLA2-SMG1P6H3BVE0 249 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 K7EPK0 472 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 UPK2O00526 184 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 FFAR1O14842 300 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 GYG2O15488 501 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 SLC37A4O43826 429 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 ENTPD6O75354 484 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 IGLV6-57P01721 117 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 S100A9P06702 114 aaKnown RBP1.28□□□□□ -2.2
GCFC2-209ENST00000486016 M6PRP20645 277 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 IMPA1P29218 277 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 RANBP1P43487 201 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 DNASE1L1P49184 302 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 XKP51811 444 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 KLF3P57682 345 aaPredicted RBP1.28□□□□□ -2.2
GCFC2-209ENST00000486016 ENDOGQ14249 297 aaKnown RBP1.28□□□□□ -2.2
GCFC2-209ENST00000486016 GPR176Q14439 515 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 SLC9A3R2Q15599 337 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 C18orf21Q32NC0 220 aaPredicted RBP1.28□□□□□ -2.2
GCFC2-209ENST00000486016 Q499Y3 187 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 DEFB134Q4QY38 66 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 ACTBL2Q562R1 376 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 UBE2NLQ5JXB2 153 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 ZNF660Q6AZW8 331 aaPredicted RBP1.28□□□□□ -2.2
GCFC2-209ENST00000486016 PDCL2Q8N4E4 241 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 DRAXINQ8NBI3 349 aaPredicted RBP1.28□□□□□ -2.2
GCFC2-209ENST00000486016 OR8A1Q8NGG7 326 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 OR8S1Q8NH09 359 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 LRRC20Q8TCA0 184 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 BLNKQ8WV28 456 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 FMC1Q96HJ9 113 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 YPEL4Q96NS1 127 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms