RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-215	ENST00000482714	RBFOX1	Q9NWB1	397 aa	Known RBP	12.82	□□□□□ -0.36
CCM2-215	ENST00000482714	ZNF205	O95201	554 aa		12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	PRKACA	P17612	351 aa		12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	RORC	P51449	518 aa		12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	OR10A3	P58181	314 aa		12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	LMO4	P61968	165 aa		12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	MXD1	Q05195	221 aa		12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	DYNC1I2	Q13409	638 aa	Known RBP	12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	MPV17L	Q2QL34	196 aa		12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	SFXN4	Q6P4A7	337 aa		12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	NR2C2AP	Q86WQ0	139 aa		12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	CLDND2	Q8NHS1	167 aa		12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	PPP1R35	Q8TAP8	253 aa		12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	SLC25A46	Q96AG3	418 aa		12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	KCTD12	Q96CX2	325 aa	Known RBP	12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	DGCR14	Q96DF8	476 aa	Known RBP	12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	NEIL1	Q96FI4	390 aa	Predicted RBP	12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	C1orf159	Q96HA4	380 aa		12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	FAM234A	Q9H0X4	552 aa		12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	IFT22	Q9H7X7	185 aa		12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	ABRACL	Q9P1F3	81 aa		12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	ZNF222	Q9UK12	451 aa		12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	RAB22A	Q9UL26	194 aa		12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	ST3GAL6	Q9Y274	331 aa		12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	TEP1	Q99973	2627 aa	Known RBP	12.81	□□□□□ -0.36
CCM2-215	ENST00000482714	IGKV1D-17	A0A075B6S4	117 aa		12.8	□□□□□ -0.36
CCM2-215	ENST00000482714		A0A096LNT2	108 aa		12.8	□□□□□ -0.36
CCM2-215	ENST00000482714	IGHV4-61	A0A0C4DH41	118 aa		12.8	□□□□□ -0.36
CCM2-215	ENST00000482714	CEACAM18	A8MTB9	384 aa		12.8	□□□□□ -0.36
CCM2-215	ENST00000482714	TMEM14DP	A8MWL7	114 aa		12.8	□□□□□ -0.36
CCM2-215	ENST00000482714	ADAM20	O43506	726 aa		12.8	□□□□□ -0.36
CCM2-215	ENST00000482714	GYPA	P02724	150 aa		12.8	□□□□□ -0.36
CCM2-215	ENST00000482714	VSIG8	P0DPA2	414 aa		12.8	□□□□□ -0.36
CCM2-215	ENST00000482714	SERPINA2	P20848	420 aa		12.8	□□□□□ -0.36
CCM2-215	ENST00000482714	IL13RA1	P78552	427 aa		12.8	□□□□□ -0.36
CCM2-215	ENST00000482714	QRFP	P83859	136 aa		12.8	□□□□□ -0.36
CCM2-215	ENST00000482714	OR8B3	Q8NGG8	313 aa		12.8	□□□□□ -0.36
CCM2-215	ENST00000482714	OR5D13	Q8NGL4	314 aa		12.8	□□□□□ -0.36
CCM2-215	ENST00000482714	ISOC1	Q96CN7	298 aa		12.8	□□□□□ -0.36
CCM2-215	ENST00000482714	DMRTB1	Q96MA1	342 aa		12.8	□□□□□ -0.36
CCM2-215	ENST00000482714	OR8B2	Q96RD0	313 aa		12.8	□□□□□ -0.36
CCM2-215	ENST00000482714	URM1	Q9BTM9	101 aa	Known RBP	12.8	□□□□□ -0.36
CCM2-215	ENST00000482714	DCSTAMP	Q9H295	470 aa		12.8	□□□□□ -0.36
CCM2-215	ENST00000482714	SPACA1	Q9HBV2	294 aa		12.8	□□□□□ -0.36
CCM2-215	ENST00000482714	NKX6-3	A6NJ46	265 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	RNF223	E7ERA6	249 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714		F5H0A9	414 aa	Predicted RBP	12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	LDLRAD4	O15165	306 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	SIGLEC5	O15389	551 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	TMPRSS2	O15393	492 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	IGHV2-5	P01817	119 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	GLA	P06280	429 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	CLEC2L	P0C7M8	214 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	RPS2	P15880	293 aa	Known RBP	12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	MGMT	P16455	207 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	AMY2B	P19961	511 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	RAB6A	P20340	208 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	GABRA2	P47869	451 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	GMFB	P60983	142 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	HES5	Q5TA89	166 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	C19orf18	Q8NEA5	215 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	OR51D1	Q8NGF3	324 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	OR5T2	Q8NGG2	359 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	ACOT12	Q8WYK0	555 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	SEH1L	Q96EE3	360 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	SNX22	Q96L94	193 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	TM2D1	Q9BX74	207 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	LIN7B	Q9HAP6	207 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	BATF3	Q9NR55	127 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	RSL24D1	Q9UHA3	163 aa	Known RBP	12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	DAPK2	Q9UIK4	370 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	HIVEP1	P15822	2718 aa		12.79	□□□□□ -0.36
CCM2-215	ENST00000482714	IGHV3OR15-7	A0A075B7D8	119 aa		12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	DEGS1	O15121	323 aa		12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	NDUFB3	O43676	98 aa		12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	FOXH1	O75593	365 aa		12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	CRTAP	O75718	401 aa	Predicted RBP	12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	ECD	O95905	644 aa	Predicted RBP	12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	HAND1	O96004	215 aa		12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	FOSL1	P15407	271 aa		12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	CAV3	P56539	151 aa		12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	RBM11	P57052	281 aa	Known RBP	12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	LRRC10	Q5BKY1	277 aa		12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	FAM89B	Q8N5H3	189 aa		12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	CD177	Q8N6Q3	437 aa		12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	OR10K1	Q8NGX5	313 aa		12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	AP3S1	Q92572	193 aa		12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	CMTM3	Q96MX0	182 aa		12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	CCL13	Q99616	98 aa		12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	NKX3-1	Q99801	234 aa	Predicted RBP	12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	RBM38	Q9H0Z9	239 aa	Known RBP	12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	MAB21L2	Q9Y586	359 aa		12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	ETV7	Q9Y603	341 aa		12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	METTL21EP	A6NDL7	271 aa		12.78	□□□□□ -0.36
CCM2-215	ENST00000482714		K7N7A8	449 aa		12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	ZNF182	P17025	639 aa	Predicted RBP	12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	SOX6	P35712	828 aa		12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	TGFBR1	P36897	503 aa		12.78	□□□□□ -0.36
CCM2-215	ENST00000482714	KCNJ3	P48549	501 aa		12.78	□□□□□ -0.36

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