RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 CNIH4Q9P003 139 aa4.99□□□□□ -1.61
CBX3-206ENST00000481057 ZNF639Q9UID6 485 aa4.99□□□□□ -1.61
CBX3-206ENST00000481057 CHCHD2Q9Y6H1 151 aaPredicted RBP4.99□□□□□ -1.61
CBX3-206ENST00000481057 SPACA6W5XKT8 324 aa4.99□□□□□ -1.61
CBX3-206ENST00000481057 A0A075B6Q4 140 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 WASHC1A8K0Z3 465 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 LYNX1G3V0Z9 82 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 SLC1A7O00341 560 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 LCMT2O60294 686 aaKnown RBP4.98□□□□□ -1.61
CBX3-206ENST00000481057 SELENOFO60613 162 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 GLCEO94923 617 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 GADD45GO95257 159 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 LYNX1P0DP58 116 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 ATP6V1B2P21281 511 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 ME2P23368 584 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 S100A11P31949 105 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 LHX2P50458 406 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 CCR4P51679 360 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 XKP51811 444 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 CLDN18P56856 261 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 KRTAP10-7P60409 375 aaPredicted RBP4.98□□□□□ -1.61
CBX3-206ENST00000481057 RAP1AP62834 184 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 SCN1BQ07699 218 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 TMED2Q15363 201 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 NSUN5P1Q3KNT7 163 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 ZNF404Q494X3 552 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 SPANXN2Q5MJ10 180 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 MEDAGQ5VYS4 303 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 HAGHLQ6PII5 290 aaPredicted RBP4.98□□□□□ -1.61
CBX3-206ENST00000481057 DUX4L9Q6RFH8 374 aaPredicted RBP4.98□□□□□ -1.61
CBX3-206ENST00000481057 HSDL2Q6YN16 418 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 MISPQ8IVT2 679 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 OR4N5Q8IXE1 308 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 TCEANCQ8N8B7 351 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 NUP37Q8NFH4 326 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 OR10G3Q8NGC4 313 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 OR52M1Q8NGK5 317 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 OR9A2Q8NGT5 310 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 OR6K3Q8NGY3 331 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 MCFD2Q8NI22 146 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 FBXO25Q8TCJ0 367 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 POP5Q969H6 163 aaKnown RBP4.98□□□□□ -1.61
CBX3-206ENST00000481057 RAB3CQ96E17 227 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 LINC00052Q96N35 136 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 NEDD4LQ96PU5 975 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 VGLL1Q99990 258 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 DPH7Q9BTV6 452 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 RAB1BQ9H0U4 201 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 TRABDQ9H4I3 376 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 MTHFD2LQ9H903 347 aaPredicted RBP4.98□□□□□ -1.61
CBX3-206ENST00000481057 POLE4Q9NR33 117 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 POFUT2Q9Y2G5 429 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 WIPI2Q9Y4P8 454 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 MMACHCQ9Y4U1 282 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 FAT2Q9NYQ8 4349 aa4.98□□□□□ -1.61
CBX3-206ENST00000481057 IGKV3D-11A0A0A0MRZ8 115 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 A0A0U1RQK1 487 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 ZNF320A2RRD8 509 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 C1orf196B1AJZ1 125 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 SIGLEC5O15389 551 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 SAP30O75446 220 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 GCM2O75603 506 aaPredicted RBP4.97□□□□□ -1.61
CBX3-206ENST00000481057 BCAS2O75934 225 aaPredicted RBP4.97□□□□□ -1.61
CBX3-206ENST00000481057 TBX6O95947 436 aaPredicted RBP4.97□□□□□ -1.61
CBX3-206ENST00000481057 IFNA17P01571 189 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 ZNF708P17019 499 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 RPS3P23396 243 aaKnown RBP eCLIP4.97□□□□□ -1.615e-7■□□□□ 8.4
CBX3-206ENST00000481057 SSTR1P30872 391 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 CALCRP30988 508 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 SDC4P31431 198 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 OTX1P32242 354 aaPredicted RBP4.97□□□□□ -1.61
CBX3-206ENST00000481057 GPR4P46093 362 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 GPR6P46095 362 aaPredicted RBP4.97□□□□□ -1.61
CBX3-206ENST00000481057 ACTBP60709 375 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 CXCR4P61073 352 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 ACTA2P62736 377 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 RBX1P62877 108 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 ACTG2P63267 376 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 ACTC1P68032 377 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 ACTA1P68133 377 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 MRPS11P82912 194 aaKnown RBP4.97□□□□□ -1.61
CBX3-206ENST00000481057 GK3PQ14409 553 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 GPR176Q14439 515 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 QPRTQ15274 297 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 CHI3L2Q15782 390 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 NEDD8Q15843 81 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 TATDN3Q17R31 274 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 NDUFAF6Q330K2 333 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 BAIAP2L2Q6UXY1 529 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 ZNF620Q6ZNG0 422 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 MYPOPQ86VE0 399 aaPredicted RBP4.97□□□□□ -1.61
CBX3-206ENST00000481057 ANGPTL5Q86XS5 388 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 SVBPQ8N300 66 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 ARRDC1Q8N5I2 433 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 YIPF7Q8N8F6 280 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 BHLHE23Q8NDY6 225 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 OR5T3Q8NGG3 340 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 DYNC2LI1Q8TCX1 351 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 ACOT11Q8WXI4 607 aaPredicted RBP4.97□□□□□ -1.61
CBX3-206ENST00000481057 EBNA1BP2Q99848 306 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms