RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 GID4Q8IVV7 300 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 OR8H2Q8N162 312 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 OR10H4Q8NGA5 316 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 OR51A4Q8NGJ6 313 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 OR8J1Q8NGP2 316 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 OR2G2Q8NGZ5 317 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 OR10AC1Q8NH08 325 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 OR2T6Q8NHC8 308 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 CENPNQ96H22 339 aaPredicted RBP5.64□□□□□ -1.51
HDAC3-207ENST00000475549 SNX22Q96L94 193 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 NKX3-1Q99801 234 aaPredicted RBP5.64□□□□□ -1.51
HDAC3-207ENST00000475549 CITED2Q99967 270 aaPredicted RBP5.64□□□□□ -1.51
HDAC3-207ENST00000475549 PRRG3Q9BZD7 231 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 CHST6Q9GZX3 395 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 SLC7A11Q9UPY5 501 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 HILPDAQ9Y5L2 63 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 IGHV2-26A0A0B4J1V2 119 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 TRBV2A0A0J9YWF9 115 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 LOC107986453A0A1B0GWG9 222 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 H3BNX3 289 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 DYNC1I1O14576 645 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 ISG15P05161 165 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 CD24P25063 80 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 OR3A1P47881 315 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 DYNLT3P51808 116 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 MTCP1P56278 107 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 MEF2CQ06413 473 aaPredicted RBP5.63□□□□□ -1.51
HDAC3-207ENST00000475549 PDZK1IP1Q13113 114 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 DYNC1I2Q13409 638 aaKnown RBP5.63□□□□□ -1.51
HDAC3-207ENST00000475549 TMED1Q13445 227 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 EDDM3AQ14507 147 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 CNN3Q15417 329 aaKnown RBP5.63□□□□□ -1.51
HDAC3-207ENST00000475549 GRK1Q15835 563 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 NSUN5P1Q3KNT7 163 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 TMEM95Q3KNT9 176 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 SLC25A30Q5SVS4 291 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 C1orf146Q5VVC0 180 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 FDX2Q6P4F2 183 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 FAM58AQ8N1B3 248 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 DNAAF1Q8NEP3 725 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 OR4P4Q8NGL7 312 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 OR13D1Q8NGV5 346 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 EMG1Q92979 244 aaKnown RBP5.63□□□□□ -1.51
HDAC3-207ENST00000475549 FGGYQ96C11 551 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 ZNF714Q96N38 554 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 OR5M11Q96RB7 305 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 ZNF649Q9BS31 505 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 MMP28Q9H239 520 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 RIBC2Q9H4K1 309 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 HMG20AQ9NP66 347 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 RAB18Q9NP72 206 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 GNG8Q9UK08 70 aa5.63□□□□□ -1.51
HDAC3-207ENST00000475549 TBL2Q9Y4P3 447 aaKnown RBP5.63□□□□□ -1.51
HDAC3-207ENST00000475549 hADV38S2A0JD32 116 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 SAC3D1A6NKF1 404 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 OR4C45A6NMZ5 311 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 LY6LH3BQJ8 138 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 SIRPB1O00241 398 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 KDM4BO94953 1096 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 OR2H2O95918 312 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 SERPINA3P01011 423 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 AMY1AP04745 511 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 AMY2AP04746 511 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 ALPLP05186 524 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 GABRB1P18505 474 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 ATF1P18846 271 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 GABRR1P24046 479 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 AZGP1P25311 298 aaKnown RBP5.62□□□□□ -1.51
HDAC3-207ENST00000475549 LMO1P25800 156 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 ERP29P30040 261 aaKnown RBP5.62□□□□□ -1.51
HDAC3-207ENST00000475549 ATP6V1E1P36543 226 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 GLIPR1P48060 266 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 RBP2P50120 134 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 ATP1B3P54709 279 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 SNU13P55769 128 aaKnown RBP5.62□□□□□ -1.51
HDAC3-207ENST00000475549 P2RX3P56373 397 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 CDK5R1Q15078 307 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 Q6P435 159 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 UTS2BQ765I0 119 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 ABHD12Q8N2K0 398 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 ZNF676Q8N7Q3 588 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 RPS4Y2Q8TD47 263 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 TRUB1Q8WWH5 349 aaKnown RBP5.62□□□□□ -1.51
HDAC3-207ENST00000475549 PYDC1Q8WXC3 89 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 PP6455Q8WZ26 134 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 CORO2AQ92828 525 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 RFT1Q96AA3 541 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 C10orf35Q96D05 121 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 RNFT2Q96EX2 444 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 PELI1Q96FA3 418 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 BORCS8Q96FH0 119 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 COQ2Q96H96 371 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 HRASLS5Q96KN8 279 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 SPACA5Q96QH8 159 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 MBOAT4Q96T53 435 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 ADI1Q9BV57 179 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 TMEM133Q9H2Q1 129 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 ISG20L2Q9H9L3 353 aaKnown RBP5.62□□□□□ -1.51
HDAC3-207ENST00000475549 PLEKHA1Q9HB21 404 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms