RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 RBFOX1Q9NWB1 397 aaKnown RBP7.57□□□□□ -1.2
SMC4-214ENST00000472991 IL36RNQ9UBH0 155 aa7.57□□□□□ -1.2
SMC4-214ENST00000472991 DUX4Q9UBX2 424 aa7.57□□□□□ -1.2
SMC4-214ENST00000472991 HIVEP2P31629 2446 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 IGKV1D-17A0A075B6S4 117 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 NKX6-3A6NJ46 265 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 TRIM64CA6NLI5 447 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 TNFRSF13BO14836 293 aaPredicted RBP7.56□□□□□ -1.2
SMC4-214ENST00000472991 PHF1O43189 567 aaPredicted RBP7.56□□□□□ -1.2
SMC4-214ENST00000472991 NDUFA2O43678 99 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 TGFAP01135 160 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 ACAA1P09110 424 aaPredicted RBP7.56□□□□□ -1.2
SMC4-214ENST00000472991 WNT2P09544 360 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 TMEM225BP0DP42 221 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 CALCBP10092 127 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 PSG2P11465 335 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 SELLP14151 372 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 AMY2BP19961 511 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 PITPNBP48739 271 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 CEBPDP49716 269 aaPredicted RBP7.56□□□□□ -1.2
SMC4-214ENST00000472991 SNU13P55769 128 aaKnown RBP7.56□□□□□ -1.2
SMC4-214ENST00000472991 GNB2P62879 340 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 LCN2P80188 198 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 C1QL2Q7Z5L3 287 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 Q8IYB0 196 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 SAXO1Q8IYX7 474 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 NKAIN3Q8N8D7 197 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 ANGPTL6Q8NI99 470 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 PHYHIPQ92561 330 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 C12orf43Q96C57 262 aaKnown RBP7.56□□□□□ -1.2
SMC4-214ENST00000472991 GAFA1Q96PS6 74 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 SSBP3Q9BWW4 388 aaPredicted RBP7.56□□□□□ -1.2
SMC4-214ENST00000472991 TCF7L1Q9HCS4 588 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 EXOSC4Q9NPD3 245 aaKnown RBP7.56□□□□□ -1.2
SMC4-214ENST00000472991 RASL12Q9NYN1 266 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 OR14J1Q9UGF5 321 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 ZNF222Q9UK12 451 aa7.56□□□□□ -1.2
SMC4-214ENST00000472991 ANK3Q12955 4377 aaKnown RBP7.55□□□□□ -1.2
SMC4-214ENST00000472991 TRDV1A0A1B0GX56 115 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 RFPL4AA6NLU0 287 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 A8MXK9 166 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 B4DSR2 109 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 RFPL4AL1F8VTS6 287 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 DVL1O14640 695 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 FOXH1O75593 365 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 FCN3O75636 299 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 ARL6IP5O75915 188 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 KDM4BO94953 1096 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 CDRT1O95170 752 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 SFTPBP07988 381 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 MSMBP08118 114 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 PRKACAP17612 351 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 ADRA2CP18825 462 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 SRMP19623 302 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 ZFP36P26651 326 aaKnown RBP7.55□□□□□ -1.2
SMC4-214ENST00000472991 CALRP27797 417 aaKnown RBP7.55□□□□□ -1.2
SMC4-214ENST00000472991 PTGFRP43088 359 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 IKZF1Q13422 519 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 ATPAF1Q5TC12 328 aaPredicted RBP7.55□□□□□ -1.2
SMC4-214ENST00000472991 WDR25Q64LD2 544 aaPredicted RBP7.55□□□□□ -1.2
SMC4-214ENST00000472991 C22orf42Q6IC83 251 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 FAM166AQ6J272 317 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 CD200R1LQ6Q8B3 271 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 ZNF841Q6ZN19 808 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 ZNF788Q6ZQV5 615 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 SLC36A1Q7Z2H8 476 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 LRRTM1Q86UE6 522 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 GLCCI1Q86VQ1 547 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 FAM58AQ8N1B3 248 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 FGFRL1Q8N441 504 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 CD177Q8N6Q3 437 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 PNLDC1Q8NA58 520 aaKnown RBP7.55□□□□□ -1.2
SMC4-214ENST00000472991 ZSCAN4Q8NAM6 433 aaPredicted RBP7.55□□□□□ -1.2
SMC4-214ENST00000472991 PXT1Q8NFP0 134 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 OR10K1Q8NGX5 313 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 ST8SIA4Q92187 359 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 DNTTIP1Q9H147 329 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 SLITRK2Q9H156 845 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 OR51E2Q9H255 320 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 CNTD2Q9H8S5 307 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 ELL3Q9HB65 397 aaPredicted RBP7.55□□□□□ -1.2
SMC4-214ENST00000472991 HMG20AQ9NP66 347 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 YAE1D1Q9NRH1 226 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 KAAG1Q9UBP8 84 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 CLN8Q9UBY8 286 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 STUB1Q9UNE7 303 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 MTORP42345 2549 aa7.55□□□□□ -1.2
SMC4-214ENST00000472991 TRAV20A0A0B4J274 112 aa7.54□□□□□ -1.2
SMC4-214ENST00000472991 SHISA3A0PJX4 238 aa7.54□□□□□ -1.2
SMC4-214ENST00000472991 SIGLEC5O15389 551 aa7.54□□□□□ -1.2
SMC4-214ENST00000472991 NDUFB3O43676 98 aa7.54□□□□□ -1.2
SMC4-214ENST00000472991 HTR3BO95264 441 aa7.54□□□□□ -1.2
SMC4-214ENST00000472991 KNG1P01042 644 aa7.54□□□□□ -1.2
SMC4-214ENST00000472991 CD36P16671 472 aa7.54□□□□□ -1.2
SMC4-214ENST00000472991 SERPINA2P20848 420 aa7.54□□□□□ -1.2
SMC4-214ENST00000472991 CPT2P23786 658 aa7.54□□□□□ -1.2
SMC4-214ENST00000472991 GADD45AP24522 165 aa7.54□□□□□ -1.2
SMC4-214ENST00000472991 DUSP1P28562 367 aa7.54□□□□□ -1.2
SMC4-214ENST00000472991 NPY4RP50391 375 aa7.54□□□□□ -1.2
SMC4-214ENST00000472991 DVL1P1P54792 670 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms