RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 GP2P55259 537 aaKnown RBP17.24■□□□□ 0.35
TOP3A-204ENST00000472959 CAV3P56539 151 aa17.24■□□□□ 0.35
TOP3A-204ENST00000472959 FABP5Q01469 135 aa17.24■□□□□ 0.35
TOP3A-204ENST00000472959 ZNF146Q15072 292 aa17.24■□□□□ 0.35
TOP3A-204ENST00000472959 SYT6Q5T7P8 510 aaPredicted RBP17.24■□□□□ 0.35
TOP3A-204ENST00000472959 JAGN1Q8N5M9 183 aa17.24■□□□□ 0.35
TOP3A-204ENST00000472959 DACT3Q96B18 629 aaPredicted RBP17.24■□□□□ 0.35
TOP3A-204ENST00000472959 S100A13Q99584 98 aa17.24■□□□□ 0.35
TOP3A-204ENST00000472959 PPIL3Q9H2H8 161 aaKnown RBP17.24■□□□□ 0.35
TOP3A-204ENST00000472959 VCX3AQ9NNX9 186 aa17.24■□□□□ 0.35
TOP3A-204ENST00000472959 C22orf46C9J442 243 aa17.23■□□□□ 0.35
TOP3A-204ENST00000472959 CRLF1O75462 422 aa17.23■□□□□ 0.35
TOP3A-204ENST00000472959 RSU1Q15404 277 aa17.23■□□□□ 0.35
TOP3A-204ENST00000472959 CD200R1LQ6Q8B3 271 aa17.23■□□□□ 0.35
TOP3A-204ENST00000472959 BTN2A1Q7KYR7 527 aa17.23■□□□□ 0.35
TOP3A-204ENST00000472959 C1QL2Q7Z5L3 287 aa17.23■□□□□ 0.35
TOP3A-204ENST00000472959 LRRTM1Q86UE6 522 aa17.23■□□□□ 0.35
TOP3A-204ENST00000472959 ZNRF1Q8ND25 227 aa17.23■□□□□ 0.35
TOP3A-204ENST00000472959 TMEM185AQ8NFB2 350 aa17.23■□□□□ 0.35
TOP3A-204ENST00000472959 Q8NFD4 153 aa17.23■□□□□ 0.35
TOP3A-204ENST00000472959 FOXRED1Q96CU9 486 aaPredicted RBP17.23■□□□□ 0.35
TOP3A-204ENST00000472959 DMRTB1Q96MA1 342 aa17.23■□□□□ 0.35
TOP3A-204ENST00000472959 NUDT16L1Q9BRJ7 211 aaKnown RBP17.23■□□□□ 0.35
TOP3A-204ENST00000472959 UQCC2Q9BRT2 126 aa17.23■□□□□ 0.35
TOP3A-204ENST00000472959 BEX2Q9BXY8 128 aa17.23■□□□□ 0.35
TOP3A-204ENST00000472959 FAM234AQ9H0X4 552 aa17.23■□□□□ 0.35
TOP3A-204ENST00000472959 METTL9Q9H1A3 318 aa17.23■□□□□ 0.35
TOP3A-204ENST00000472959 C7orf69Q9H7B7 122 aa17.23■□□□□ 0.35
TOP3A-204ENST00000472959 ELL3Q9HB65 397 aaPredicted RBP17.23■□□□□ 0.35
TOP3A-204ENST00000472959 PCDHB16Q9NRJ7 776 aa17.23■□□□□ 0.35
TOP3A-204ENST00000472959 IL36GQ9NZH8 169 aa17.23■□□□□ 0.35
TOP3A-204ENST00000472959 SONP18583 2426 aaKnown RBP17.23■□□□□ 0.35
TOP3A-204ENST00000472959 NSD1Q96L73 2696 aaPredicted RBP17.23■□□□□ 0.35
TOP3A-204ENST00000472959 TRDV1A0A1B0GX56 115 aa17.22■□□□□ 0.35
TOP3A-204ENST00000472959 SH2D1BO14796 132 aa17.22■□□□□ 0.35
TOP3A-204ENST00000472959 ZNF780AO75290 641 aaPredicted RBP17.22■□□□□ 0.35
TOP3A-204ENST00000472959 HAND1O96004 215 aa17.22■□□□□ 0.35
TOP3A-204ENST00000472959 SELLP14151 372 aa17.22■□□□□ 0.35
TOP3A-204ENST00000472959 CEBPDP49716 269 aaPredicted RBP17.22■□□□□ 0.35
TOP3A-204ENST00000472959 FGF12P61328 243 aa17.22■□□□□ 0.35
TOP3A-204ENST00000472959 PAX8Q06710 450 aa17.22■□□□□ 0.35
TOP3A-204ENST00000472959 NEDD8Q15843 81 aa17.22■□□□□ 0.35
TOP3A-204ENST00000472959 CHRFAM7AQ494W8 412 aa17.22■□□□□ 0.35
TOP3A-204ENST00000472959 LYPD6Q86Y78 171 aa17.22■□□□□ 0.35
TOP3A-204ENST00000472959 NR1H4Q96RI1 486 aaPredicted RBP17.22■□□□□ 0.35
TOP3A-204ENST00000472959 TMPRSS13Q9BYE2 586 aa17.22■□□□□ 0.35
TOP3A-204ENST00000472959 CNTD2Q9H8S5 307 aa17.22■□□□□ 0.35
TOP3A-204ENST00000472959 RPUSD1Q9UJJ7 312 aaKnown RBP17.22■□□□□ 0.35
TOP3A-204ENST00000472959 ING4Q9UNL4 249 aa17.22■□□□□ 0.35
TOP3A-204ENST00000472959 FN1P02751 2386 aaKnown RBP17.22■□□□□ 0.35
TOP3A-204ENST00000472959 CDRT1O95170 752 aa17.21■□□□□ 0.35
TOP3A-204ENST00000472959 NDUFB7P17568 137 aa17.21■□□□□ 0.35
TOP3A-204ENST00000472959 ADRA2CP18825 462 aa17.21■□□□□ 0.35
TOP3A-204ENST00000472959 CAPZA1P52907 286 aa17.21■□□□□ 0.35
TOP3A-204ENST00000472959 RIPPLY3P57055 190 aa17.21■□□□□ 0.35
TOP3A-204ENST00000472959 COL10A1Q03692 680 aa17.21■□□□□ 0.35
TOP3A-204ENST00000472959 GPR176Q14439 515 aa17.21■□□□□ 0.35
TOP3A-204ENST00000472959 GLT8D1Q68CQ7 371 aa17.21■□□□□ 0.35
TOP3A-204ENST00000472959 MUL1Q969V5 352 aa17.21■□□□□ 0.35
TOP3A-204ENST00000472959 NKX3-1Q99801 234 aaPredicted RBP17.21■□□□□ 0.35
TOP3A-204ENST00000472959 MRI1Q9BV20 369 aa17.21■□□□□ 0.35
TOP3A-204ENST00000472959 IL36RNQ9UBH0 155 aa17.21■□□□□ 0.35
TOP3A-204ENST00000472959 METRNQ9UJH8 293 aa17.21■□□□□ 0.35
TOP3A-204ENST00000472959 GSTK1Q9Y2Q3 226 aa17.21■□□□□ 0.35
TOP3A-204ENST00000472959 MRPS28Q9Y2Q9 187 aaKnown RBP17.21■□□□□ 0.35
TOP3A-204ENST00000472959 AUP1Q9Y679 476 aa17.21■□□□□ 0.35
TOP3A-204ENST00000472959 TRBV23-1A0A0A0MS06 115 aa17.2■□□□□ 0.34
TOP3A-204ENST00000472959 K7N7A8 449 aa17.2■□□□□ 0.34
TOP3A-204ENST00000472959 ZNF737O75373 536 aa17.2■□□□□ 0.34
TOP3A-204ENST00000472959 TK1P04183 234 aa17.2■□□□□ 0.34
TOP3A-204ENST00000472959 PPIAL4GP0DN37 164 aa17.2■□□□□ 0.34
TOP3A-204ENST00000472959 CALCBP10092 127 aa17.2■□□□□ 0.34
TOP3A-204ENST00000472959 CD37P11049 281 aa17.2■□□□□ 0.34
TOP3A-204ENST00000472959 CALRP27797 417 aaKnown RBP17.2■□□□□ 0.34
TOP3A-204ENST00000472959 DUSP1P28562 367 aa17.2■□□□□ 0.34
TOP3A-204ENST00000472959 FGFRL1Q8N441 504 aa17.2■□□□□ 0.34
TOP3A-204ENST00000472959 LY6G5BQ8NDX9 201 aa17.2■□□□□ 0.34
TOP3A-204ENST00000472959 OR51T1Q8NGJ9 327 aa17.2■□□□□ 0.34
TOP3A-204ENST00000472959 OR5D13Q8NGL4 314 aa17.2■□□□□ 0.34
TOP3A-204ENST00000472959 C8orf46Q8TAG6 207 aa17.2■□□□□ 0.34
TOP3A-204ENST00000472959 DCTN5Q9BTE1 182 aa17.2■□□□□ 0.34
TOP3A-204ENST00000472959 EXOSC4Q9NPD3 245 aaKnown RBP17.2■□□□□ 0.34
TOP3A-204ENST00000472959 OPN4Q9UHM6 478 aa17.2■□□□□ 0.34
TOP3A-204ENST00000472959 TRIM64CA6NLI5 447 aa17.19■□□□□ 0.34
TOP3A-204ENST00000472959 HTR3BO95264 441 aa17.19■□□□□ 0.34
TOP3A-204ENST00000472959 CSTBP04080 98 aaKnown RBP17.19■□□□□ 0.34
TOP3A-204ENST00000472959 SNU13P55769 128 aaKnown RBP17.19■□□□□ 0.34
TOP3A-204ENST00000472959 ASCC1Q8N9N2 400 aaKnown RBP17.19■□□□□ 0.34
TOP3A-204ENST00000472959 OR10K1Q8NGX5 313 aa17.19■□□□□ 0.34
TOP3A-204ENST00000472959 PPP1R35Q8TAP8 253 aa17.19■□□□□ 0.34
TOP3A-204ENST00000472959 TBC1D15Q8TC07 691 aa17.19■□□□□ 0.34
TOP3A-204ENST00000472959 H1FXQ92522 213 aaKnown RBP17.19■□□□□ 0.34
TOP3A-204ENST00000472959 SNX22Q96L94 193 aa17.19■□□□□ 0.34
TOP3A-204ENST00000472959 GHRLQ9UBU3 117 aa17.19■□□□□ 0.34
TOP3A-204ENST00000472959 TRAV1-2A0A0B4J238 106 aa17.18■□□□□ 0.34
TOP3A-204ENST00000472959 AVPP01185 164 aa17.18■□□□□ 0.34
TOP3A-204ENST00000472959 LMO1P25800 156 aa17.18■□□□□ 0.34
TOP3A-204ENST00000472959 FGF9P31371 208 aaPredicted RBP17.18■□□□□ 0.34
TOP3A-204ENST00000472959 SRP14P37108 136 aaKnown RBP17.18■□□□□ 0.34
TOP3A-204ENST00000472959 PSMD7P51665 324 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms