RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 LURAP1Q96LR2 239 aa16.08■□□□□ 0.16
PSPC1-203ENST00000471658 URM1Q9BTM9 101 aaKnown RBP16.08■□□□□ 0.16
PSPC1-203ENST00000471658 ABCG5Q9H222 651 aa16.08■□□□□ 0.16
PSPC1-203ENST00000471658 METRNQ9UJH8 293 aa16.08■□□□□ 0.16
PSPC1-203ENST00000471658 IGKV1D-17A0A075B6S4 117 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 OOEPA6NGQ2 149 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 OR2AT4A6NND4 320 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 LGALS8O00214 317 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 KNG1P01042 644 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 GYPAP02724 150 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 PAX1P15863 534 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 AMY2BP19961 511 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 DNASE1P24855 282 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 TMEM50BP56557 158 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 ZNF146Q15072 292 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 ZMYND11Q15326 602 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 SMIM21Q3B7S5 101 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 NHLRC3Q5JS37 347 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 TEX36Q5VZQ5 186 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 Q6P435 159 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 BRICD5Q6PL45 260 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 FAM89BQ8N5H3 189 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 GSX2Q9BZM3 304 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 CHODLQ9H9P2 273 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 TMEM165Q9HC07 324 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 PEX16Q9Y5Y5 336 aa16.07■□□□□ 0.16
PSPC1-203ENST00000471658 CLDN25C9JDP6 229 aa16.06■□□□□ 0.16
PSPC1-203ENST00000471658 PPIHO43447 177 aaKnown RBP16.06■□□□□ 0.16
PSPC1-203ENST00000471658 APOA1P02647 267 aa16.06■□□□□ 0.16
PSPC1-203ENST00000471658 PITPNBP48739 271 aa16.06■□□□□ 0.16
PSPC1-203ENST00000471658 IKZF1Q13422 519 aa16.06■□□□□ 0.16
PSPC1-203ENST00000471658 MICBQ29980 383 aa16.06■□□□□ 0.16
PSPC1-203ENST00000471658 OR4M1Q8NGD0 313 aa16.06■□□□□ 0.16
PSPC1-203ENST00000471658 UNC79Q9P2D8 2635 aa16.06■□□□□ 0.16
PSPC1-203ENST00000471658 A0A1B0GW55 424 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 FOXI3A8MTJ6 420 aaPredicted RBP16.05■□□□□ 0.16
PSPC1-203ENST00000471658 RAB27BO00194 218 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 OR7C1O76099 320 aaPredicted RBP16.05■□□□□ 0.16
PSPC1-203ENST00000471658 HAND1O96004 215 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 DUX4L2P0CJ85 424 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 DUX4L3P0CJ86 424 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 DUX4L4P0CJ87 422 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 DUX4L5P0CJ88 424 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 DUX4L6P0CJ89 424 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 DUX4L7P0CJ90 424 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 CDK2P24941 298 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 PRDX2P32119 198 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 GABRA2P47869 451 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 BTG1P62324 171 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 IL13RA2Q14627 380 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 DEFB113Q30KQ7 82 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 STUMQ69YW2 141 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 CNIH2Q6PI25 160 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 DUX4L9Q6RFH8 374 aaPredicted RBP16.05■□□□□ 0.16
PSPC1-203ENST00000471658 ANGPTL6Q8NI99 470 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 CMTM3Q96MX0 182 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 EXTL2Q9UBQ6 330 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 DUX4Q9UBX2 424 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 METTL21EPA6NDL7 271 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 SIRPB1O00241 398 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 DEGS1O15121 323 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 OR2H2O95918 312 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 IGHV2-70P01814 119 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 CPT2P23786 658 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 BLVRBP30043 206 aaPredicted RBP16.05■□□□□ 0.16
PSPC1-203ENST00000471658 S100A5P33763 92 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 TMEM33P57088 247 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 LYPD2Q6UXB3 125 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 LRRC28Q86X40 367 aaPredicted RBP16.05■□□□□ 0.16
PSPC1-203ENST00000471658 RAB40AQ8WXH6 277 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 S100A16Q96FQ6 103 aaKnown RBP16.05■□□□□ 0.16
PSPC1-203ENST00000471658 DIRAS2Q96HU8 199 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 CCL13Q99616 98 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 TMEM246Q9BRR3 403 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 ZMAT3Q9HA38 289 aaKnown RBP16.05■□□□□ 0.16
PSPC1-203ENST00000471658 ZNF222Q9UK12 451 aa16.05■□□□□ 0.16
PSPC1-203ENST00000471658 TRAV38-1A0A0B4J264 116 aa16.04■□□□□ 0.16
PSPC1-203ENST00000471658 TRAV24A0A0B4J272 114 aa16.04■□□□□ 0.16
PSPC1-203ENST00000471658 PTHLHP12272 177 aa16.04■□□□□ 0.16
PSPC1-203ENST00000471658 ZNF44P15621 663 aa16.04■□□□□ 0.16
PSPC1-203ENST00000471658 MUC1P15941 1255 aaPredicted RBP16.04■□□□□ 0.16
PSPC1-203ENST00000471658 PLAC9Q5JTB6 97 aa16.04■□□□□ 0.16
PSPC1-203ENST00000471658 SPIN3Q5JUX0 258 aa16.04■□□□□ 0.16
PSPC1-203ENST00000471658 NKAPLQ5M9Q1 402 aa16.04■□□□□ 0.16
PSPC1-203ENST00000471658 ATAD3CQ5T2N8 411 aa16.04■□□□□ 0.16
PSPC1-203ENST00000471658 CHST4Q8NCG5 386 aa16.04■□□□□ 0.16
PSPC1-203ENST00000471658 OR56B1Q8NGI3 324 aa16.04■□□□□ 0.16
PSPC1-203ENST00000471658 OR10R2Q8NGX6 335 aa16.04■□□□□ 0.16
PSPC1-203ENST00000471658 ARHGAP5-AS1Q96IT6 56 aa16.04■□□□□ 0.16
PSPC1-203ENST00000471658 WDFY2Q96P53 400 aa16.04■□□□□ 0.16
PSPC1-203ENST00000471658 BARX1Q9HBU1 254 aaPredicted RBP16.04■□□□□ 0.16
PSPC1-203ENST00000471658 BEX4Q9NWD9 120 aaPredicted RBP16.04■□□□□ 0.16
PSPC1-203ENST00000471658 ELF5Q9UKW6 265 aaPredicted RBP16.04■□□□□ 0.16
PSPC1-203ENST00000471658 TRAV18A0A075B6X5 111 aa16.03■□□□□ 0.16
PSPC1-203ENST00000471658 ISPDA4D126 451 aa16.03■□□□□ 0.16
PSPC1-203ENST00000471658 HSPB6O14558 160 aa16.03■□□□□ 0.16
PSPC1-203ENST00000471658 SH2D1BO14796 132 aa16.03■□□□□ 0.16
PSPC1-203ENST00000471658 TNFRSF13BO14836 293 aaPredicted RBP16.03■□□□□ 0.16
PSPC1-203ENST00000471658 SELLP14151 372 aa16.03■□□□□ 0.16
PSPC1-203ENST00000471658 GPR6P46095 362 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms