RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 DENRO43583 198 aaKnown RBP3.81□□□□□ -1.8
CCDC39-202ENST00000471307 EFNA2O43921 213 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 HCN1O60741 890 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 TRAPPC6AO75865 159 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 RCBTB2O95199 551 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 SNAP29O95721 258 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 SERPINA3P01011 423 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 SNRPCP09234 159 aaKnown RBP3.81□□□□□ -1.8
CCDC39-202ENST00000471307 GSTT2P0CG29 244 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 GSTT2BP0CG30 244 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 IFI30P13284 250 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 POU2F1P14859 743 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 GDF1P27539 372 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 PPT1P50897 306 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 SUCLG1P53597 346 aaKnown RBP3.81□□□□□ -1.8
CCDC39-202ENST00000471307 CRISP1P54107 249 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 AQP4P55087 323 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 NUP107P57740 925 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 PRPS1P60891 318 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 ADARB1P78563 741 aaKnown RBP3.81□□□□□ -1.8
CCDC39-202ENST00000471307 PLGLB1Q02325 96 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 FOXF1Q12946 379 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 SELENBP1Q13228 472 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 IL18R1Q13478 541 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 EXOSC2Q13868 293 aaKnown RBP3.81□□□□□ -1.8
CCDC39-202ENST00000471307 BCL2A1Q16548 175 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 ZBED5Q49AG3 693 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 PHYHD1Q5SRE7 291 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 C1orf140Q5VVS0 124 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 RPL13AP3Q6NVV1 102 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 C3orf33Q6P1S2 294 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 DPY19L2P2Q6ZN68 376 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 Q6ZS92 163 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 OAFQ86UD1 273 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 CENPSQ8N2Z9 138 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 CLDN22Q8N7P3 220 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 SYT14Q8NB59 555 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 FAM83FQ8NEG4 500 aaPredicted RBP3.81□□□□□ -1.8
CCDC39-202ENST00000471307 ZNF555Q8NEP9 628 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 MFSD8Q8NHS3 518 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 VN1R17PQ8TDU5 208 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 SPRYD4Q8WW59 207 aaPredicted RBP3.81□□□□□ -1.8
CCDC39-202ENST00000471307 OSTF1Q92882 214 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 SGTBQ96EQ0 304 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 NIPSNAP1Q9BPW8 284 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 KLHDC3Q9BQ90 382 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 TTYH2Q9BSA4 534 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 TAPBPLQ9BX59 468 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 GABARAPL3Q9BY60 117 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 HES7Q9BYE0 225 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 TTTY12Q9BZ98 90 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 NDEL1Q9GZM8 345 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 NANSQ9NR45 359 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 IL20Q9NYY1 176 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 MIOXQ9UGB7 285 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 ZNF229Q9UJW7 825 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 RPH3ALQ9UNE2 315 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 SIGLEC7Q9Y286 467 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 HDGFL3Q9Y3E1 203 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 ZNF337Q9Y3M9 751 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 ZNF175Q9Y473 711 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 AP4B1Q9Y6B7 739 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 ASPMQ8IZT6 3477 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 CELSR3Q9NYQ7 3312 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 ACACBO00763 2458 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 ZFHX4Q86UP3 3567 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 ALPK2Q86TB3 2170 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 MED12Q93074 2177 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 GTF3C1Q12789 2109 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 NCKAP5O14513 1909 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 ARPC4-TTLL3A0A0A6YYG9 625 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 PPIAL4CA0A0B4J2A2 164 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 LOC102725191A0A1B0GVB3 256 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 PINLYPA6NC86 204 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 FTCDNL1E5RQL4 147 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 H3BN98 237 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 KPNA4O00629 521 aaPredicted RBP3.8□□□□□ -1.8
CCDC39-202ENST00000471307 CDC42EP2O14613 210 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 MPZL2O60487 215 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 EIF1BO60739 113 aaKnown RBP3.8□□□□□ -1.8
CCDC39-202ENST00000471307 OR7A10O76100 309 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 VAMP5O95183 116 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 AHSA1O95433 338 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 ACTL6AO96019 429 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 IGHG3P01860 377 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 BGLAPP02818 100 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 HMGN1P05114 100 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 TSPAN19P0C672 248 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 ASAH2BP0C7U1 165 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 PPIAL4GP0DN37 164 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 GGT2P36268 569 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 POLR2IP36954 125 aaKnown RBP3.8□□□□□ -1.8
CCDC39-202ENST00000471307 TAGLN2P37802 199 aaKnown RBP3.8□□□□□ -1.8
CCDC39-202ENST00000471307 MAGEA5P43359 124 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 GPR4P46093 362 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 RPS5P46782 204 aaKnown RBP3.8□□□□□ -1.8
CCDC39-202ENST00000471307 CDC42P60953 191 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 RPL27P61353 136 aaKnown RBP3.8□□□□□ -1.8
CCDC39-202ENST00000471307 CDK5Q00535 292 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 ZP4Q12836 540 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms