RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 PMP22Q01453 160 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 ZNF92Q03936 586 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 OR1C1Q15619 314 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 FAM76BQ5HYJ3 339 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 TMEM200AQ86VY9 491 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 SULF2Q8IWU5 870 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 OR5H2Q8NGV7 314 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 PRRT1Q99946 306 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 SLC25A21Q9BQT8 299 aaPredicted RBP8.2□□□□□ -1.1
TOP3A-203ENST00000469739 URM1Q9BTM9 101 aaKnown RBP8.2□□□□□ -1.1
TOP3A-203ENST00000469739 RNF122Q9H9V4 155 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 SLC7A10Q9NS82 523 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 TREM2Q9NZC2 230 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 RELNP78509 3460 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 PKDREJQ9NTG1 2253 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 IGKV1-27A0A075B6S5 117 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 A0A087WZY1 265 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 C9orf170A2RU37 121 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 DBX1A6NMT0 343 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 SLC33A1O00400 549 aaPredicted RBP8.2□□□□□ -1.1
TOP3A-203ENST00000469739 CDX4O14627 284 aaPredicted RBP8.2□□□□□ -1.1
TOP3A-203ENST00000469739 MRPL33O75394 65 aaKnown RBP8.2□□□□□ -1.1
TOP3A-203ENST00000469739 WISP2O76076 250 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 VAMP5O95183 116 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 SERPINA7P05543 415 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 HPNP05981 417 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 MUC1P15941 1255 aaPredicted RBP8.2□□□□□ -1.1
TOP3A-203ENST00000469739 SERPINF1P36955 418 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 EIF2S3P41091 472 aaKnown RBP8.2□□□□□ -1.1
TOP3A-203ENST00000469739 MECP2P51608 486 aaKnown RBP8.2□□□□□ -1.1
TOP3A-203ENST00000469739 SSPNQ14714 243 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 RSU1Q15404 277 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 HES3Q5TGS1 186 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 DMRTC2Q8IXT2 367 aaPredicted RBP8.2□□□□□ -1.1
TOP3A-203ENST00000469739 SEMA6DQ8NFY4 1073 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 TCTEX1D2Q8WW35 142 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 TMEM54Q969K7 222 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 EDEM2Q9BV94 578 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 TREM1Q9NP99 234 aa8.2□□□□□ -1.1
TOP3A-203ENST00000469739 MCTS1Q9ULC4 181 aaKnown RBP8.2□□□□□ -1.1
TOP3A-203ENST00000469739 ZNF716A6NP11 495 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 NEURL1O76050 574 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 SFTPBP07988 381 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 ACP1P24666 158 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 SRSF3P84103 164 aaKnown RBP8.19□□□□□ -1.1
TOP3A-203ENST00000469739 RELQ04864 619 aaPredicted RBP8.19□□□□□ -1.1
TOP3A-203ENST00000469739 SP6Q3SY56 376 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 SPATA46Q5T0L3 261 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 MED12LQ86YW9 2145 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 OR1F12Q8NHA8 337 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 PHYHIPLQ96FC7 376 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 CNTNAP3BQ96NU0 1288 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 TAAR9Q96RI9 348 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 SH2D2AQ9NP31 389 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 CRIM1Q9NZV1 1036 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 A0A1W2PPE3 182 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 DHRS7CA6NNS2 312 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 GEMIN2O14893 280 aaKnown RBP8.19□□□□□ -1.1
TOP3A-203ENST00000469739 ACTL6AO96019 429 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 CD59P13987 128 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 RAB6AP20340 208 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 AGTR1P30556 359 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 LSM6P62312 80 aaKnown RBP8.19□□□□□ -1.1
TOP3A-203ENST00000469739 ARF1P84077 181 aaKnown RBP8.19□□□□□ -1.1
TOP3A-203ENST00000469739 CHRFAM7AQ494W8 412 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 CRIP3Q6Q6R5 217 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 CLEC9AQ6UXN8 241 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 ADPRHL1Q8NDY3 354 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 CPEB3Q8NE35 698 aaKnown RBP8.19□□□□□ -1.1
TOP3A-203ENST00000469739 BORCS8Q96FH0 119 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 SEC11CQ9BY50 192 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 METTL8Q9H825 291 aaKnown RBP8.19□□□□□ -1.1
TOP3A-203ENST00000469739 MOB1AQ9H8S9 216 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 CHMP1AQ9HD42 196 aaPredicted RBP8.19□□□□□ -1.1
TOP3A-203ENST00000469739 OR2S2Q9NQN1 319 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 TMEM38BQ9NVV0 291 aa8.19□□□□□ -1.1
TOP3A-203ENST00000469739 HEATR1Q9H583 2144 aaKnown RBP8.19□□□□□ -1.1
TOP3A-203ENST00000469739 C5orf49A4QMS7 147 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 EFSO43281 561 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 MT-CO3P00414 261 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 CD74P04233 296 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 S100A10P60903 97 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 FOXO1Q12778 655 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 MEF2DQ14814 521 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 MPPED2Q15777 294 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 DCAF10Q5QP82 559 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 FAM27BQ5VT28 67 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 PLCXD3Q63HM9 321 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 FBXL14Q8N1E6 418 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 ZNF561Q8N587 486 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 OR2M7Q8NG81 312 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 OR56B1Q8NGI3 324 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 VRK1Q99986 396 aaPredicted RBP8.18□□□□□ -1.1
TOP3A-203ENST00000469739 C5orf66Q9H5L9 145 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 ZNF503-AS2A6NEH8 195 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 GJE1A6NN92 205 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 ZNF850A8MQ14 1090 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 NGFP01138 241 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 NPBWR2P48146 333 aa8.18□□□□□ -1.1
TOP3A-203ENST00000469739 RAB2AP61019 212 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms