RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 RAB13P51153 203 aa14.2□□□□□ -0.14
COL7A1-206ENST00000466591 ARHGDIBP52566 201 aa14.2□□□□□ -0.14
COL7A1-206ENST00000466591 EFNB2P52799 333 aa14.2□□□□□ -0.14
COL7A1-206ENST00000466591 MEDAGQ5VYS4 303 aa14.2□□□□□ -0.14
COL7A1-206ENST00000466591 Q6ZSR3 168 aa14.2□□□□□ -0.14
COL7A1-206ENST00000466591 KCTD20Q7Z5Y7 419 aa14.2□□□□□ -0.14
COL7A1-206ENST00000466591 TMEM219Q86XT9 240 aa14.2□□□□□ -0.14
COL7A1-206ENST00000466591 TPRX1Q8N7U7 411 aa14.2□□□□□ -0.14
COL7A1-206ENST00000466591 DNAAF1Q8NEP3 725 aa14.2□□□□□ -0.14
COL7A1-206ENST00000466591 OPALINQ96PE5 141 aa14.2□□□□□ -0.14
COL7A1-206ENST00000466591 EXOSC4Q9NPD3 245 aaKnown RBP14.2□□□□□ -0.14
COL7A1-206ENST00000466591 RBFOX1Q9NWB1 397 aaKnown RBP14.2□□□□□ -0.14
COL7A1-206ENST00000466591 TCF19Q9Y242 345 aa14.2□□□□□ -0.14
COL7A1-206ENST00000466591 HILPDAQ9Y5L2 63 aa14.2□□□□□ -0.14
COL7A1-206ENST00000466591 IGKV1-27A0A075B6S5 117 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 TRGV10A0A0A0MS01 117 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 J3QLW9 94 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 SIRPB1O00241 398 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 SH2D1BO14796 132 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 CHST1O43916 411 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 ZNF737O75373 536 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 FBXO24O75426 580 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 ALDOBP05062 364 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 ZNF19P17023 458 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 ATF1P18846 271 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 ZNF85Q03923 595 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 SCN1BQ07699 218 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 IL18R1Q13478 541 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 NSUN5P1Q3KNT7 163 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 ZIK1Q3SY52 487 aaPredicted RBP14.19□□□□□ -0.14
COL7A1-206ENST00000466591 SPIN3Q5JUX0 258 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 OR2G2Q8NGZ5 317 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 RFT1Q96AA3 541 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 SPSB1Q96BD6 273 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 PRSS22Q9GZN4 317 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 GAL3ST2Q9H3Q3 398 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 HHLA2Q9UM44 414 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 GSTK1Q9Y2Q3 226 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 LINC00312Q9Y6C7 94 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 SESN1Q9Y6P5 492 aa14.19□□□□□ -0.14
COL7A1-206ENST00000466591 TRBV2A0A0J9YWF9 115 aa14.18□□□□□ -0.14
COL7A1-206ENST00000466591 MGST3O14880 152 aa14.18□□□□□ -0.14
COL7A1-206ENST00000466591 SLC16A6O15403 523 aa14.18□□□□□ -0.14
COL7A1-206ENST00000466591 ENTPD6O75354 484 aa14.18□□□□□ -0.14
COL7A1-206ENST00000466591 IGHA1P01876 353 aa14.18□□□□□ -0.14
COL7A1-206ENST00000466591 HCKP08631 526 aa14.18□□□□□ -0.14
COL7A1-206ENST00000466591 ZNF44P15621 663 aa14.18□□□□□ -0.14
COL7A1-206ENST00000466591 KIR3DL2P43630 455 aa14.18□□□□□ -0.14
COL7A1-206ENST00000466591 KPNB1Q14974 876 aaKnown RBP14.18□□□□□ -0.14
COL7A1-206ENST00000466591 ZNF626Q68DY1 528 aa14.18□□□□□ -0.14
COL7A1-206ENST00000466591 C11orf42Q8N5U0 333 aa14.18□□□□□ -0.14
COL7A1-206ENST00000466591 ACBD7Q8N6N7 88 aa14.18□□□□□ -0.14
COL7A1-206ENST00000466591 OR4S1Q8NGB4 309 aa14.18□□□□□ -0.14
COL7A1-206ENST00000466591 OR11H6Q8NGC7 330 aa14.18□□□□□ -0.14
COL7A1-206ENST00000466591 STMN2Q93045 179 aa14.18□□□□□ -0.14
COL7A1-206ENST00000466591 ADAT3Q96EY9 351 aaPredicted RBP14.18□□□□□ -0.14
COL7A1-206ENST00000466591 OR5M11Q96RB7 305 aa14.18□□□□□ -0.14
COL7A1-206ENST00000466591 CDCA4Q9BXL8 241 aa14.18□□□□□ -0.14
COL7A1-206ENST00000466591 CLEC7AQ9BXN2 247 aa14.18□□□□□ -0.14
COL7A1-206ENST00000466591 ING3Q9NXR8 418 aa14.18□□□□□ -0.14
COL7A1-206ENST00000466591 TMEM82A0PJX8 343 aa14.17□□□□□ -0.14
COL7A1-206ENST00000466591 VGLL3A8MV65 326 aa14.17□□□□□ -0.14
COL7A1-206ENST00000466591 EI24O14681 340 aa14.17□□□□□ -0.14
COL7A1-206ENST00000466591 NPBWR2P48146 333 aa14.17□□□□□ -0.14
COL7A1-206ENST00000466591 DLX6P56179 175 aa14.17□□□□□ -0.14
COL7A1-206ENST00000466591 ZNF91Q05481 1191 aa14.17□□□□□ -0.14
COL7A1-206ENST00000466591 MINOS1Q5TGZ0 78 aa14.17□□□□□ -0.14
COL7A1-206ENST00000466591 OR52W1Q6IF63 320 aa14.17□□□□□ -0.14
COL7A1-206ENST00000466591 UTS2BQ765I0 119 aa14.17□□□□□ -0.14
COL7A1-206ENST00000466591 C10orf67Q8IYJ2 551 aa14.17□□□□□ -0.14
COL7A1-206ENST00000466591 OR5D18Q8NGL1 313 aa14.17□□□□□ -0.14
COL7A1-206ENST00000466591 OR13C9Q8NGT0 318 aa14.17□□□□□ -0.14
COL7A1-206ENST00000466591 AJUBAQ96IF1 538 aa14.17□□□□□ -0.14
COL7A1-206ENST00000466591 AKR1E2Q96JD6 320 aa14.17□□□□□ -0.14
COL7A1-206ENST00000466591 C4orf36Q96KX1 117 aa14.17□□□□□ -0.14
COL7A1-206ENST00000466591 FAM53CQ9NYF3 392 aa14.17□□□□□ -0.14
COL7A1-206ENST00000466591 FRRS1LQ9P0K9 344 aa14.17□□□□□ -0.14
COL7A1-206ENST00000466591 IL36RNQ9UBH0 155 aa14.17□□□□□ -0.14
COL7A1-206ENST00000466591 GMPPBQ9Y5P6 360 aa14.17□□□□□ -0.14
COL7A1-206ENST00000466591 MINOS1-NBL1R4GNA1 71 aa14.17□□□□□ -0.14
COL7A1-206ENST00000466591 IGHV2-26A0A0B4J1V2 119 aa14.16□□□□□ -0.14
COL7A1-206ENST00000466591 FAM90A8PA6NJQ4 464 aa14.16□□□□□ -0.14
COL7A1-206ENST00000466591 ODF3BA8MYP8 253 aa14.16□□□□□ -0.14
COL7A1-206ENST00000466591 TOR1AO14656 332 aa14.16□□□□□ -0.14
COL7A1-206ENST00000466591 HTR1DP28221 377 aa14.16□□□□□ -0.14
COL7A1-206ENST00000466591 VDAC2P45880 294 aaPredicted RBP14.16□□□□□ -0.14
COL7A1-206ENST00000466591 P2RX3P56373 397 aa14.16□□□□□ -0.14
COL7A1-206ENST00000466591 PDZK1IP1Q13113 114 aa14.16□□□□□ -0.14
COL7A1-206ENST00000466591 HABP2Q14520 560 aaPredicted RBP14.16□□□□□ -0.14
COL7A1-206ENST00000466591 HIST2H2BDQ6DRA6 164 aa14.16□□□□□ -0.14
COL7A1-206ENST00000466591 ZFP1Q6P2D0 407 aa14.16□□□□□ -0.14
COL7A1-206ENST00000466591 LYG1Q8N1E2 194 aa14.16□□□□□ -0.14
COL7A1-206ENST00000466591 TSEN15Q8WW01 171 aaKnown RBP14.16□□□□□ -0.14
COL7A1-206ENST00000466591 CPNE2Q96FN4 548 aaPredicted RBP14.16□□□□□ -0.14
COL7A1-206ENST00000466591 Q96MT0 163 aa14.16□□□□□ -0.14
COL7A1-206ENST00000466591 COMMD4Q9H0A8 199 aa14.16□□□□□ -0.14
COL7A1-206ENST00000466591 TMEM133Q9H2Q1 129 aa14.16□□□□□ -0.14
COL7A1-206ENST00000466591 UBE2J1Q9Y385 318 aaPredicted RBP14.16□□□□□ -0.14
COL7A1-206ENST00000466591 MAGEB3O15480 346 aa14.15□□□□□ -0.14
COL7A1-206ENST00000466591 ISG15P05161 165 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms