RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 URGCP-MRPS24S4R325 110 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 A0A087X0M5 115 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 A0A1B0GX30 115 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 METTL12A8MUP2 240 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 E9PLN8 166 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 NR2C1P13056 603 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 FAHP16930 419 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 ZNF41P51814 821 aaPredicted RBP17.19■□□□□ 0.34
SDF4-205ENST00000465727 TLE4Q04727 773 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 PNRC1Q12796 327 aaPredicted RBP17.19■□□□□ 0.34
SDF4-205ENST00000465727 TMEM92Q6UXU6 159 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 OR5L1Q8NGL2 311 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 MOB3AQ96BX8 217 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 REEP6Q96HR9 211 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 CDRT15L2A8MXV6 281 aa17.18■□□□□ 0.34
SDF4-205ENST00000465727 PHF1O43189 567 aaPredicted RBP17.18■□□□□ 0.34
SDF4-205ENST00000465727 CD63P08962 238 aa17.18■□□□□ 0.34
SDF4-205ENST00000465727 QDPRP09417 244 aa17.18■□□□□ 0.34
SDF4-205ENST00000465727 RNF224P0DH78 156 aa17.18■□□□□ 0.34
SDF4-205ENST00000465727 FXYD4P59646 89 aa17.18■□□□□ 0.34
SDF4-205ENST00000465727 HLA-DRB3P79483 266 aa17.18■□□□□ 0.34
SDF4-205ENST00000465727 PHLDA2Q53GA4 152 aa17.18■□□□□ 0.34
SDF4-205ENST00000465727 TSPO2Q5TGU0 170 aa17.18■□□□□ 0.34
SDF4-205ENST00000465727 KIAA0895LQ68EN5 471 aa17.18■□□□□ 0.34
SDF4-205ENST00000465727 RCC1LQ96I51 464 aaKnown RBP17.18■□□□□ 0.34
SDF4-205ENST00000465727 MEGF10Q96KG7 1140 aa17.18■□□□□ 0.34
SDF4-205ENST00000465727 JSRP1Q96MG2 331 aaPredicted RBP17.18■□□□□ 0.34
SDF4-205ENST00000465727 SPIN2AQ99865 258 aa17.18■□□□□ 0.34
SDF4-205ENST00000465727 SPIN2BQ9BPZ2 258 aa17.18■□□□□ 0.34
SDF4-205ENST00000465727 VN1R1Q9GZP7 353 aa17.18■□□□□ 0.34
SDF4-205ENST00000465727 LYRM2Q9NU23 88 aaPredicted RBP17.18■□□□□ 0.34
SDF4-205ENST00000465727 FOXD3Q9UJU5 478 aaPredicted RBP17.18■□□□□ 0.34
SDF4-205ENST00000465727 PTRH2Q9Y3E5 179 aaKnown RBP17.18■□□□□ 0.34
SDF4-205ENST00000465727 RANBP2P49792 3224 aaKnown RBP17.18■□□□□ 0.34
SDF4-205ENST00000465727 CCDC187A0A096LP49 1063 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 TCRBV21S2A2A0A5A6 115 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 C2orf72A6NCS6 295 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 TRGC1P0CF51 173 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 CEACAM1P13688 526 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 MYOGP15173 224 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 MSX1P28360 303 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 RND2P52198 227 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 CEBPGP53567 150 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 FBXW4P57775 412 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 DMRTC1Q5HYR2 192 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 SLC35G3Q8N808 338 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 OR5L2Q8NGL0 311 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 CLDND2Q8NHS1 167 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 PIGTQ969N2 578 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 SPSB1Q96BD6 273 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 FAM210BQ96KR6 192 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 OXGR1Q96P68 337 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 C2orf88Q9BSF0 95 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 FAAP24Q9BTP7 215 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 PRO3102Q9H379 93 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 PIGLQ9Y2B2 252 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 MYO7BQ6PIF6 2116 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 MKRN2OSH3BPM6 223 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 FABP4P15090 132 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 GABRG2P18507 467 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 NKX2-1P43699 371 aaPredicted RBP17.17■□□□□ 0.34
SDF4-205ENST00000465727 BAXQ07812 192 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 ZNF124Q15973 351 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 GFI1BQ5VTD9 330 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 FAM185AQ8N0U4 392 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 GJC3Q8NFK1 279 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 BADQ92934 168 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 NKX2-4Q9H2Z4 354 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 SLCO1B1Q9Y6L6 691 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 SEC16AO15027 2179 aa17.17■□□□□ 0.34
SDF4-205ENST00000465727 IGSF23A1L1A6 192 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 FAM24AA6NFZ4 105 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 TLX3O43711 291 aaPredicted RBP17.16■□□□□ 0.34
SDF4-205ENST00000465727 EFNA2O43921 213 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 DBHP09172 617 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 RRADP55042 308 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 RAB4BP61018 213 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 AKR1C8PQ5T2L2 129 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 CARD17Q5XLA6 110 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 OR10AD1Q8NGE0 317 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 PACRGQ96M98 296 aaPredicted RBP17.16■□□□□ 0.34
SDF4-205ENST00000465727 DUSP15Q9H1R2 295 aaPredicted RBP17.16■□□□□ 0.34
SDF4-205ENST00000465727 PITPNC1Q9UKF7 332 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 TRIOBPQ9H2D6 2365 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 SMCO3A2RU48 225 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 MMP9P14780 707 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 DRD1P21728 446 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 OPRM1P35372 400 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 GUCA1AP43080 201 aaPredicted RBP17.16■□□□□ 0.34
SDF4-205ENST00000465727 DPPA2Q7Z7J5 298 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 TMEM252Q8N6L7 170 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 PLPP5Q8NEB5 264 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 ABHD5Q8WTS1 349 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 RNF138Q8WVD3 245 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 KLHDC7BQ96G42 594 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 ABHD14AQ9BUJ0 271 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 ZNF286AQ9HBT8 521 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 CYP8B1Q9UNU6 501 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 B3GALT1Q9Y5Z6 326 aa17.16■□□□□ 0.34
SDF4-205ENST00000465727 TRAV1-1A0A0B4J248 108 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms