RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 RHBDD2Q6NTF9 364 aa12.68□□□□□ -0.38
NCL-207ENST00000461347 MRPL41Q8IXM3 137 aaKnown RBP12.68□□□□□ -0.38
NCL-207ENST00000461347 TVP23CQ96ET8 276 aa12.68□□□□□ -0.38
NCL-207ENST00000461347 RASL10BQ96S79 203 aa12.68□□□□□ -0.38
NCL-207ENST00000461347 HINT2Q9BX68 163 aa12.68□□□□□ -0.38
NCL-207ENST00000461347 ESPL1Q14674 2120 aa12.68□□□□□ -0.38
NCL-207ENST00000461347 IL13RA2Q14627 380 aa12.68□□□□□ -0.38
NCL-207ENST00000461347 PIGYQ3MUY2 71 aa12.68□□□□□ -0.38
NCL-207ENST00000461347 ABHD17BQ5VST6 288 aa12.68□□□□□ -0.38
NCL-207ENST00000461347 ZNF787Q6DD87 383 aa12.68□□□□□ -0.38
NCL-207ENST00000461347 C17orf78Q8N4C9 275 aa12.68□□□□□ -0.38
NCL-207ENST00000461347 ZNF610Q8N9Z0 462 aa12.68□□□□□ -0.38
NCL-207ENST00000461347 OR10J5Q8NHC4 309 aa12.68□□□□□ -0.38
NCL-207ENST00000461347 MALSU1Q96EH3 234 aa12.68□□□□□ -0.38
NCL-207ENST00000461347 DMRTA2Q96SC8 542 aa12.68□□□□□ -0.38
NCL-207ENST00000461347 RNF126Q9BV68 326 aa12.68□□□□□ -0.38
NCL-207ENST00000461347 D2HGDHQ8N465 521 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 OR11L1Q8NGX0 322 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 RPUSD4Q96CM3 377 aaKnown RBP12.67□□□□□ -0.38
NCL-207ENST00000461347 ZNF385AQ96PM9 386 aaKnown RBP12.67□□□□□ -0.38
NCL-207ENST00000461347 C3orf85A0A1B0GTC6 90 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 ZNF705FA8MVS1 300 aaPredicted RBP12.67□□□□□ -0.38
NCL-207ENST00000461347 PDCD6O75340 191 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 MELTFP08582 738 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 CD63P08962 238 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 ZNF705DP0CH99 300 aaPredicted RBP12.67□□□□□ -0.38
NCL-207ENST00000461347 ZNF705BP0CI00 300 aaPredicted RBP12.67□□□□□ -0.38
NCL-207ENST00000461347 SMAD4Q13485 552 aaKnown RBP12.67□□□□□ -0.38
NCL-207ENST00000461347 LPAL2Q16609 132 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 FNDC7Q5VTL7 733 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 C1QL2Q7Z5L3 287 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 EDEM2Q9BV94 578 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 PPP1R3CQ9UQK1 317 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 DHRS7CA6NNS2 312 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 ZNF814B7Z6K7 855 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 ZNF708P17019 499 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 IL2RGP31785 369 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 DUSP3P51452 185 aaPredicted RBP12.67□□□□□ -0.38
NCL-207ENST00000461347 TMEM50BP56557 158 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 TMEM164Q5U3C3 297 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 CST9LP1Q5W188 147 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 GUSBP11Q6P575 273 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 PAQR4Q8N4S7 273 aaPredicted RBP12.67□□□□□ -0.38
NCL-207ENST00000461347 RAB39BQ96DA2 213 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 IP6K3Q96PC2 410 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 FOXB1Q99853 325 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 CHST5Q9GZS9 411 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 ZNF576Q9H609 170 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 UFSP2Q9NUQ7 469 aa12.67□□□□□ -0.38
NCL-207ENST00000461347 MCTS1Q9ULC4 181 aaKnown RBP12.67□□□□□ -0.38
NCL-207ENST00000461347 RBFOX3A6NFN3 312 aa12.66□□□□□ -0.38
NCL-207ENST00000461347 SEC11BP0C7V7 166 aa12.66□□□□□ -0.38
NCL-207ENST00000461347 FUT6P51993 359 aa12.66□□□□□ -0.38
NCL-207ENST00000461347 MRPL49Q13405 166 aaKnown RBP12.66□□□□□ -0.38
NCL-207ENST00000461347 PLPPR5Q32ZL2 321 aa12.66□□□□□ -0.38
NCL-207ENST00000461347 OR2B11Q5JQS5 317 aa12.66□□□□□ -0.38
NCL-207ENST00000461347 RBMS3Q6XE24 437 aaKnown RBP12.66□□□□□ -0.38
NCL-207ENST00000461347 LHX4Q969G2 390 aa12.66□□□□□ -0.38
NCL-207ENST00000461347 CARHSP1Q9Y2V2 147 aaKnown RBP12.66□□□□□ -0.38
NCL-207ENST00000461347 CCDC187A0A096LP49 1063 aa12.66□□□□□ -0.38
NCL-207ENST00000461347 ZNF816-ZNF321PA0A0X1KG74 233 aa12.66□□□□□ -0.38
NCL-207ENST00000461347 C5orf49A4QMS7 147 aa12.66□□□□□ -0.38
NCL-207ENST00000461347 NDUFS6O75380 124 aaKnown RBP12.66□□□□□ -0.38
NCL-207ENST00000461347 DEDDO75618 318 aa12.66□□□□□ -0.38
NCL-207ENST00000461347 FABP4P15090 132 aa12.66□□□□□ -0.38
NCL-207ENST00000461347 NXPH1P58417 271 aa12.66□□□□□ -0.38
NCL-207ENST00000461347 LSM6P62312 80 aaKnown RBP12.66□□□□□ -0.38
NCL-207ENST00000461347 OR5AS1Q8N127 324 aa12.66□□□□□ -0.38
NCL-207ENST00000461347 POC1AQ8NBT0 407 aa12.66□□□□□ -0.38
NCL-207ENST00000461347 NKX2-6A6NCS4 301 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 H7BYZ3 331 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 YIF1AO95070 293 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 MBPP02686 304 aaPredicted RBP12.65□□□□□ -0.38
NCL-207ENST00000461347 GAPDHP04406 335 aaKnown RBP12.65□□□□□ -0.38
NCL-207ENST00000461347 P2RY1P47900 373 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 FAM3AP98173 230 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 LTC4SQ16873 150 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 OR4A4PQ8NGN8 299 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 ERGIC1Q969X5 290 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 HIST1H2BAQ96A08 127 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 CCDC74BQ96LY2 380 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 PRR19A6NJB7 356 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 PHOX2AO14813 284 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 PGA4P0DJD7 388 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 PGA3P0DJD8 388 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 CCL7P80098 99 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 EWSR1Q01844 656 aaKnown RBP eCLIP12.65□□□□□ -0.38
NCL-207ENST00000461347 RAB35Q15286 201 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 EXT1Q16394 746 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 RTN4RL2Q86UN3 420 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 HPSE2Q8WWQ2 592 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 DUSP15Q9H1R2 295 aaPredicted RBP12.65□□□□□ -0.38
NCL-207ENST00000461347 P4HTMQ9NXG6 502 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 ATP6V0CP27449 155 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 RPL19P84098 196 aaKnown RBP12.65□□□□□ -0.38
NCL-207ENST00000461347 BAXQ07812 192 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 NTNG2Q96CW9 530 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 SMIM7Q9BQ49 75 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 CDH20Q9HBT6 801 aa12.65□□□□□ -0.38
NCL-207ENST00000461347 OR6C6A6NF89 314 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms