RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ACTBP60709 375 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 S100A10P60903 97 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 ACTG1P63261 375 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 HOXA4Q00056 320 aaPredicted RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 PSRC1Q6PGN9 363 aaPredicted RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 LILRA6Q6PI73 481 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 CLEC2AQ6UVW9 174 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 OR9A4Q8NGU2 314 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 NEUROG1Q92886 237 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 RBM18Q96H35 190 aaKnown RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 PCGF1Q9BSM1 259 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 NXF5Q9H1B4 397 aaKnown RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 RGCCQ9H4X1 137 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 BCO1Q9HAY6 547 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 TRBV24-1A0A075B6N3 115 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 ITGA10O75578 1167 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 NXPH3O95157 252 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 BMP5P22003 454 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 WASP42768 502 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 LHX2P50458 406 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 FGF8P55075 233 aaPredicted RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 FAM3BP58499 235 aaPredicted RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF674Q2M3X9 581 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 C1orf140Q5VVS0 124 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 C17orf99Q6UX52 265 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 TMEM92Q6UXU6 159 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 TMEM182Q6ZP80 229 aaPredicted RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 ZFP62Q8NB50 900 aaPredicted RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 RNASEH2CQ8TDP1 164 aaKnown RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 SLC39A7Q92504 469 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 DAZLQ92904 295 aaKnown RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 TM4SF19Q96DZ7 209 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF558Q96NG5 402 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF2Q9BSG1 426 aaPredicted RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 DERL1Q9BUN8 251 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 P4HTMQ9NXG6 502 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 ANAPC10Q9UM13 185 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 LSM5Q9Y4Y9 91 aaKnown RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 PTPRSQ13332 1948 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 TMEM131Q92545 1883 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 PKD1L1Q8TDX9 2849 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 YLPM1P49750 1951 aaKnown RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 LILRB3O75022 631 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 ONECUT2O95948 504 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 GAPDHP04406 335 aaKnown RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 GCH1P30793 250 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 GALNSP34059 522 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 CSNK1A1P48729 337 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 CX3CR1P49238 355 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 POLR2HP52434 150 aaKnown RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 MLF1P58340 268 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 ULK3Q6PHR2 472 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF584Q8IVC4 421 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 ZDHHC22Q8N966 263 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 IRF7Q92985 503 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 AHSPQ9NZD4 102 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 PPP4R1LQ9P1A2 415 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 TCFL5Q9UL49 500 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 MUC6Q6W4X9 2439 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 OTOGLQ3ZCN5 2332 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 A8MVM7 634 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 TCF21O43680 179 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 ANGPTL7O43827 346 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 SRPX2O60687 465 aaPredicted RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 GPR1P46091 355 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 P2RY1P47900 373 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 CDK3Q00526 305 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 RAB11BQ15907 218 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 DCAF10Q5QP82 559 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 C9orf50Q5SZB4 431 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 KCTD18Q6PI47 426 aaPredicted RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 DPY19L2P2Q6ZN68 376 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 CATSPERDQ86XM0 798 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 LRRC25Q8N386 305 aaPredicted RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 IL22RA1Q8N6P7 574 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 C12orf76Q8N812 135 aaPredicted RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 OR52R1Q8NGF1 315 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF837Q96EG3 531 aaPredicted RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 SIGLEC12Q96PQ1 595 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 TCEAL7Q9BRU2 100 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 CRIM1Q9NZV1 1036 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 COA3Q9Y2R0 106 aaPredicted RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 PAM16Q9Y3D7 125 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 TEP1Q99973 2627 aaKnown RBP3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 IGKV1-12A0A0C4DH73 117 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 RBFOX3A6NFN3 312 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 HIDE1A8MVS5 230 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 K7EPK0 472 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 MPIG6BO95866 241 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 EOMESO95936 686 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 IGKV1D-12P01611 117 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF43P17038 809 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 SLC6A6P31641 620 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 IGFALSP35858 605 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 P2RY2P41231 377 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 ERVS71-1P61550 626 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 OR4K15Q8NH41 348 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 PLPPR2Q96GM1 343 aa3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF845Q96IR2 970 aaPredicted RBP3.92□□□□□ -1.78
DEPDC1-202ENST00000456315 C2orf50Q96LR7 162 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms