RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 FBLN5Q9UBX5 448 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 CLN8Q9UBY8 286 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 TANC2Q9HCD6 1990 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 MED13LQ71F56 2210 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 SH2D1BO14796 132 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 HTR3BO95264 441 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 HAND1O96004 215 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 IGHV4-31P0DP07 118 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 AMY2BP19961 511 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 SDC2P34741 201 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 GABRA2P47869 451 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 CAV3P56539 151 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 FAM189A2Q15884 450 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 SLC22A6Q4U2R8 563 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 LRRC10Q5BKY1 277 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 CD276Q5ZPR3 534 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 CYB5R2Q6BCY4 276 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 ZNF841Q6ZN19 808 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 OR2W3Q7Z3T1 314 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 BIVMQ86UB2 503 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 OR5T2Q8NGG2 359 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 KCNG3Q8TAE7 436 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 PPP1R35Q8TAP8 253 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 DMRTB1Q96MA1 342 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 C1orf147Q96MC9 270 aaPredicted RBP11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 GAFA1Q96PS6 74 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 SSBP3Q9BWW4 388 aaPredicted RBP11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 IFT22Q9H7X7 185 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 STEAP1Q9UHE8 339 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 F8P00451 2351 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 VPS13CQ709C8 3753 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 MTORP42345 2549 aa11.91□□□□□ -0.5
HMGXB4-204ENST00000455359 FAM90A10PA6NDY2 464 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 FAM90A18PA6NE21 464 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 FAM90A16PA6NEW6 464 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 FAM90A20PA6NIJ5 464 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 FAM90A8PA6NJQ4 464 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 FAM90A7PA6NKC0 464 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 FAM90A22PA8MWA6 464 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 FAM90A12PA8MX19 464 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 FAM90A5PA8MXJ8 464 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 FAM90A23PA8MXZ1 464 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 SMAD7O15105 426 aaKnown RBP11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 IL1AP01583 271 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 MSMBP08118 114 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 FAM90A15PP0C7V4 464 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 FAM90A13PP0C7W8 464 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 FAM90A14PP0C7W9 464 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 FAM90A24PP0C7X0 464 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 ARSBP15848 533 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 GATA3P23771 443 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 LMO1P25800 156 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 IL2RGP31785 369 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 TMBIM6P55061 237 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 GNB2P62879 340 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 MPV17LQ2QL34 196 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 GPR107Q5VW38 600 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 WDR25Q64LD2 544 aaPredicted RBP11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 LYPD2Q6UXB3 125 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 CD177Q8N6Q3 437 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 SLC25A28Q96A46 364 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 MRI1Q9BV20 369 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 SPACA1Q9HBV2 294 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 CTSZQ9UBR2 303 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 OR14J1Q9UGF5 321 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 MAB21L2Q9Y586 359 aa11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 CHD3Q12873 2000 aaKnown RBP11.9□□□□□ -0.5
HMGXB4-204ENST00000455359 TLN2Q9Y4G6 2542 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 TRAV20A0A0B4J274 112 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 FAM157AC9JC47 383 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 K7N7A8 449 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 DVL1O14640 695 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 CD5LO43866 347 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 ZNF737O75373 536 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 SERPINA2P20848 420 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 RBM11P57052 281 aaKnown RBP11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 SCAND1P57086 179 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 CTF1Q16619 201 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 SLC16A12Q6ZSM3 486 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 BATF2Q8N1L9 274 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 FAM216BQ8N7L0 139 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 MAPK1IP1LQ8NDC0 245 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 OR5D13Q8NGL4 314 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 OR10K1Q8NGX5 313 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 RAB2BQ8WUD1 216 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 PTX4Q96A99 478 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 FAM3DQ96BQ1 224 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 MSI2Q96DH6 328 aaKnown RBP11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 SNX22Q96L94 193 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 SLC25A10Q9UBX3 287 aaPredicted RBP11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 OR5V1Q9UGF6 321 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 ST3GAL6Q9Y274 331 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 MALRD1Q5VYJ5 2156 aa11.89□□□□□ -0.51
HMGXB4-204ENST00000455359 TRBV23-1A0A0A0MS06 115 aa11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 A0A0G2JK05 382 aa11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 TMEM14DPA8MWL7 114 aa11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 KIAA1324LA8MWY0 1029 aaPredicted RBP11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 DEGS1O15121 323 aa11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 CRTAPO75718 401 aaPredicted RBP11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 LIPFP07098 398 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms