RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 FCGR3AP08637 254 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 FCGR2CP31995 323 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 FABP6P51161 128 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 ALKAL2Q6UX46 152 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 TMUB2Q71RG4 321 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 ZNF610Q8N9Z0 462 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 SLC25A40Q8TBP6 338 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 WDR13Q9H1Z4 485 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 C12orf4Q9NQ89 552 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 ZC4H2Q9NQZ6 224 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 ZNF71Q9NQZ8 489 aaPredicted RBP11.73□□□□□ -0.53
CLK3-203ENST00000454830 UBQLN2Q9UHD9 624 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 GPR132Q9UNW8 380 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 K7EM74 188 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 CDK2AP1O14519 115 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 WDR1O75083 606 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 MPC2O95563 127 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 S100A11P31949 105 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 KIR2DL2P43627 348 aaPredicted RBP11.73□□□□□ -0.53
CLK3-203ENST00000454830 GNG3P63215 75 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 CLEC18BQ6UXF7 455 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 Q6ZT83 130 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 OVCH2Q7RTZ1 564 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 CXorf67Q86X51 503 aaPredicted RBP11.73□□□□□ -0.53
CLK3-203ENST00000454830 MITD1Q8WV92 249 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 MRPS24Q96EL2 167 aaKnown RBP11.73□□□□□ -0.53
CLK3-203ENST00000454830 KIAA2026Q5HYC2 2103 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 IGF2RP11717 2491 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 PLSCR5A0PG75 271 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 POM121CA8CG34 1229 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 DUS4LO95620 317 aaKnown RBP11.73□□□□□ -0.53
CLK3-203ENST00000454830 CFDP00746 253 aaPredicted RBP11.73□□□□□ -0.53
CLK3-203ENST00000454830 SELEP16581 610 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 CALCRP30988 508 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 S100A10P60903 97 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 ACSF3Q4G176 576 aaPredicted RBP11.73□□□□□ -0.53
CLK3-203ENST00000454830 SPIN3Q5JUX0 258 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 LY6G6FQ5SQ64 297 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 DPPA2Q7Z7J5 298 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 GP6Q9HCN6 339 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 NAT1P18440 290 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 RTP5Q14D33 572 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 ZNF573Q86YE8 665 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 PRR18Q8N4B5 295 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 COL25A1Q9BXS0 654 aaPredicted RBP11.72□□□□□ -0.53
CLK3-203ENST00000454830 MTCH1Q9NZJ7 389 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 PTPRBP23467 1997 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 PQLC2LA1A4F0 135 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 PPA1Q15181 289 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 ALKBH6Q3KRA9 238 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 OR2A2Q6IF42 318 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 IGFL2Q6UWQ7 119 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 SGPP2Q8IWX5 399 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 OR5A2Q8NGI9 324 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 WNT2BQ93097 391 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 LAMA5O15230 3695 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 ESPL1Q14674 2120 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 MKRN2OSH3BPM6 223 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 KCNAB3O43448 404 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 PDGFAP04085 211 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 ZNF728P0DKX0 622 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 FGL1Q08830 312 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 MPPED2Q15777 294 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 GABRA6Q16445 453 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 C5orf24Q7Z6I8 188 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 FGF23Q9GZV9 251 aaPredicted RBP11.72□□□□□ -0.53
CLK3-203ENST00000454830 OPA3Q9H6K4 179 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 OR14J1Q9UGF5 321 aa11.72□□□□□ -0.53
CLK3-203ENST00000454830 FOXI3A8MTJ6 420 aaPredicted RBP11.71□□□□□ -0.53
CLK3-203ENST00000454830 SP6Q3SY56 376 aa11.71□□□□□ -0.53
CLK3-203ENST00000454830 AADACL3Q5VUY0 350 aa11.71□□□□□ -0.53
CLK3-203ENST00000454830 INO80EQ8NBZ0 244 aaPredicted RBP11.71□□□□□ -0.53
CLK3-203ENST00000454830 SPTBN4Q9H254 2564 aa11.71□□□□□ -0.53
CLK3-203ENST00000454830 HSF4Q9ULV5 492 aa11.71□□□□□ -0.53
CLK3-203ENST00000454830 EDARQ9UNE0 448 aa11.71□□□□□ -0.53
CLK3-203ENST00000454830 RHBDL1O75783 438 aa11.71□□□□□ -0.53
CLK3-203ENST00000454830 CST4P01036 141 aa11.71□□□□□ -0.53
CLK3-203ENST00000454830 IL2RAP01589 272 aa11.71□□□□□ -0.53
CLK3-203ENST00000454830 ADAT1Q9BUB4 502 aaKnown RBP11.71□□□□□ -0.53
CLK3-203ENST00000454830 RTL8AQ9BWD3 113 aa11.71□□□□□ -0.53
CLK3-203ENST00000454830 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.71□□□□□ -0.534e-6■■■□□ 18.6
CLK3-203ENST00000454830 UFSP2Q9NUQ7 469 aa11.71□□□□□ -0.53
CLK3-203ENST00000454830 MPC1Q9Y5U8 109 aa11.71□□□□□ -0.53
CLK3-203ENST00000454830 SFT2D2O95562 160 aa11.71□□□□□ -0.54
CLK3-203ENST00000454830 SCGB1D2O95969 90 aa11.71□□□□□ -0.54
CLK3-203ENST00000454830 EIF2S3P41091 472 aaKnown RBP11.71□□□□□ -0.54
CLK3-203ENST00000454830 VHLLQ6RSH7 139 aa11.71□□□□□ -0.54
CLK3-203ENST00000454830 SEZ6L2Q6UXD5 910 aa11.71□□□□□ -0.54
CLK3-203ENST00000454830 TINAGQ9UJW2 476 aa11.71□□□□□ -0.54
CLK3-203ENST00000454830 hCG_1807616A0A1W2PRN6 198 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 RFPL4AA6NLU0 287 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 AHRRA9YTQ3 701 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 RFPL4AL1F8VTS6 287 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 ERVH48-1M5A8F1 160 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 TIMM8AO60220 97 aaPredicted RBP11.7□□□□□ -0.54
CLK3-203ENST00000454830 SMPD2O60906 423 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 UCP2P55851 309 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 PIGPP57054 158 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 OR8G1Q15617 311 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 LPCAT3Q6P1A2 487 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms