RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 ZNF295-AS1Q8N0V1 137 aa19.37■□□□□ 0.69
CPSF4-204ENST00000436336 GDPD1Q8N9F7 314 aa19.37■□□□□ 0.69
CPSF4-204ENST00000436336 NEU4Q8WWR8 484 aaPredicted RBP19.37■□□□□ 0.69
CPSF4-204ENST00000436336 CTDSPLO15194 276 aa19.36■□□□□ 0.69
CPSF4-204ENST00000436336 COL8A1P27658 744 aa19.36■□□□□ 0.69
CPSF4-204ENST00000436336 ARL6IP1Q15041 203 aa19.36■□□□□ 0.69
CPSF4-204ENST00000436336 ZNF260Q3ZCT1 412 aa19.36■□□□□ 0.69
CPSF4-204ENST00000436336 SIGIRRQ6IA17 410 aa19.36■□□□□ 0.69
CPSF4-204ENST00000436336 FAM90A1Q86YD7 464 aa19.36■□□□□ 0.69
CPSF4-204ENST00000436336 SNX29P2Q8IUI4 249 aa19.36■□□□□ 0.69
CPSF4-204ENST00000436336 TREM2Q9NZC2 230 aa19.36■□□□□ 0.69
CPSF4-204ENST00000436336 UTP20O75691 2785 aaKnown RBP19.35■□□□□ 0.69
CPSF4-204ENST00000436336 LRBAP50851 2863 aa19.35■□□□□ 0.69
CPSF4-204ENST00000436336 IGHV1-69-2A0A0G2JMI3 117 aa19.35■□□□□ 0.69
CPSF4-204ENST00000436336 H3BUI4 141 aa19.35■□□□□ 0.69
CPSF4-204ENST00000436336 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.35■□□□□ 0.69
CPSF4-204ENST00000436336 OR7C1O76099 320 aaPredicted RBP19.35■□□□□ 0.69
CPSF4-204ENST00000436336 CYB5R3P00387 301 aaPredicted RBP19.35■□□□□ 0.69
CPSF4-204ENST00000436336 KNG1P01042 644 aa19.35■□□□□ 0.69
CPSF4-204ENST00000436336 PLAC9Q5JTB6 97 aa19.35■□□□□ 0.69
CPSF4-204ENST00000436336 C1orf87Q8N0U7 546 aa19.35■□□□□ 0.69
CPSF4-204ENST00000436336 ARHGAP5-AS1Q96IT6 56 aa19.35■□□□□ 0.69
CPSF4-204ENST00000436336 SDHCQ99643 169 aaPredicted RBP19.35■□□□□ 0.69
CPSF4-204ENST00000436336 AUNIPQ9H7T9 357 aa19.35■□□□□ 0.69
CPSF4-204ENST00000436336 HSF4Q9ULV5 492 aa19.35■□□□□ 0.69
CPSF4-204ENST00000436336 HIST1H1DP16402 221 aaKnown RBP19.34■□□□□ 0.69
CPSF4-204ENST00000436336 MRPS10P82664 201 aaKnown RBP19.34■□□□□ 0.69
CPSF4-204ENST00000436336 HOXA4Q00056 320 aaPredicted RBP19.34■□□□□ 0.69
CPSF4-204ENST00000436336 IKZF1Q13422 519 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 CDNFQ49AH0 187 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 TGIF2LYQ8IUE0 185 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 BOLLQ8N9W6 283 aaKnown RBP19.34■□□□□ 0.69
CPSF4-204ENST00000436336 BORCS5Q969J3 196 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 NEDD4LQ96PU5 975 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 CCDC32Q9BV29 185 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 IFT22Q9H7X7 185 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.34■□□□□ 0.69
CPSF4-204ENST00000436336 TMEM106BQ9NUM4 274 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 GLS2Q9UI32 602 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 PLEKHA6Q9Y2H5 1048 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 MFNGO00587 321 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 GSTP1P09211 210 aaKnown RBP19.34■□□□□ 0.69
CPSF4-204ENST00000436336 GNB3P16520 340 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 CHATP28329 748 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 DUSP1P28562 367 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 RBMXP38159 391 aaKnown RBP19.34■□□□□ 0.69
CPSF4-204ENST00000436336 PDCD1Q15116 288 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 Q8N402 240 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 IGFBPL1Q8WX77 278 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 CCL17Q92583 94 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 PECRQ9BY49 303 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 ZMAT3Q9HA38 289 aaKnown RBP19.34■□□□□ 0.69
CPSF4-204ENST00000436336 SPACA1Q9HBV2 294 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 PLEKHJ1Q9NW61 149 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 ZNF581Q9P0T4 197 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 DNAJB11Q9UBS4 358 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 CACNG2Q9Y698 323 aa19.34■□□□□ 0.69
CPSF4-204ENST00000436336 DOPEY2Q9Y3R5 2298 aa19.33■□□□□ 0.69
CPSF4-204ENST00000436336 HELZ2Q9BYK8 2649 aaKnown RBP19.33■□□□□ 0.68
CPSF4-204ENST00000436336 PDCD6O75340 191 aa19.33■□□□□ 0.68
CPSF4-204ENST00000436336 MELTFP08582 738 aa19.33■□□□□ 0.68
CPSF4-204ENST00000436336 FUT3P21217 361 aa19.33■□□□□ 0.68
CPSF4-204ENST00000436336 CDKN1AP38936 164 aa19.33■□□□□ 0.68
CPSF4-204ENST00000436336 HFEQ30201 348 aa19.33■□□□□ 0.68
CPSF4-204ENST00000436336 NKAPLQ5M9Q1 402 aa19.33■□□□□ 0.68
CPSF4-204ENST00000436336 SEH1LQ96EE3 360 aa19.33■□□□□ 0.68
CPSF4-204ENST00000436336 RCC2Q9P258 522 aaKnown RBP19.33■□□□□ 0.68
CPSF4-204ENST00000436336 NLKQ9UBE8 527 aa19.33■□□□□ 0.68
CPSF4-204ENST00000436336 USP9YO00507 2555 aaPredicted RBP19.33■□□□□ 0.68
CPSF4-204ENST00000436336 TMEM178BH3BS89 294 aa19.32■□□□□ 0.68
CPSF4-204ENST00000436336 OVOL3O00110 214 aa19.32■□□□□ 0.68
CPSF4-204ENST00000436336 SH2D1BO14796 132 aa19.32■□□□□ 0.68
CPSF4-204ENST00000436336 PTHLHP12272 177 aa19.32■□□□□ 0.68
CPSF4-204ENST00000436336 ATAD3CQ5T2N8 411 aa19.32■□□□□ 0.68
CPSF4-204ENST00000436336 Q6P435 159 aa19.32■□□□□ 0.68
CPSF4-204ENST00000436336 C6orf201Q7Z4U5 140 aa19.32■□□□□ 0.68
CPSF4-204ENST00000436336 DCAF16Q9NXF7 216 aa19.32■□□□□ 0.68
CPSF4-204ENST00000436336 KCNK7Q9Y2U2 307 aa19.32■□□□□ 0.68
CPSF4-204ENST00000436336 TMEM235A6NFC5 223 aa19.31■□□□□ 0.68
CPSF4-204ENST00000436336 GABARAPH6UMI1 98 aa19.31■□□□□ 0.68
CPSF4-204ENST00000436336 DEGS1O15121 323 aa19.31■□□□□ 0.68
CPSF4-204ENST00000436336 GSTZ1O43708 216 aaPredicted RBP19.31■□□□□ 0.68
CPSF4-204ENST00000436336 HAND1O96004 215 aa19.31■□□□□ 0.68
CPSF4-204ENST00000436336 ZNF44P15621 663 aa19.31■□□□□ 0.68
CPSF4-204ENST00000436336 CD80P33681 288 aa19.31■□□□□ 0.68
CPSF4-204ENST00000436336 PRSS3P35030 304 aa19.31■□□□□ 0.68
CPSF4-204ENST00000436336 MRPS11P82912 194 aaKnown RBP19.31■□□□□ 0.68
CPSF4-204ENST00000436336 SCN1BQ07699 218 aa19.31■□□□□ 0.68
CPSF4-204ENST00000436336 PNLIPRP3Q17RR3 467 aa19.31■□□□□ 0.68
CPSF4-204ENST00000436336 RTN4RL2Q86UN3 420 aa19.31■□□□□ 0.68
CPSF4-204ENST00000436336 SMIM4Q8WVI0 70 aa19.31■□□□□ 0.68
CPSF4-204ENST00000436336 ST8SIA4Q92187 359 aa19.31■□□□□ 0.68
CPSF4-204ENST00000436336 RDH5Q92781 318 aa19.31■□□□□ 0.68
CPSF4-204ENST00000436336 GCDHQ92947 438 aaPredicted RBP19.31■□□□□ 0.68
CPSF4-204ENST00000436336 SEBOXQ9HB31 216 aaPredicted RBP19.31■□□□□ 0.68
CPSF4-204ENST00000436336 DLL4Q9NR61 685 aa19.31■□□□□ 0.68
CPSF4-204ENST00000436336 OR14J1Q9UGF5 321 aa19.31■□□□□ 0.68
CPSF4-204ENST00000436336 WIPI2Q9Y4P8 454 aa19.31■□□□□ 0.68
CPSF4-204ENST00000436336 DCHS2Q6V1P9 2916 aa19.31■□□□□ 0.68
CPSF4-204ENST00000436336 SERPINE3A8MV23 424 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms