RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 SULT1A1P50225 295 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 LSM6P62312 80 aaKnown RBP11.09□□□□□ -0.63
CPNE4-201ENST00000429747 PLPPR5Q32ZL2 321 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 LIAT1Q6ZQX7 453 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 TVP23CQ96ET8 276 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 POMT1Q9Y6A1 747 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 DNAH12Q6ZR08 3092 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 TMEM14DPA8MWL7 114 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 SIRPB1O00241 398 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 CCL2P13500 99 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 SULT1A2P50226 295 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 IL13RA2Q14627 380 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 DCAF12Q5T6F0 453 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 OR10D4PQ8NGN7 298 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 RAB39BQ96DA2 213 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 CLEC1BQ9P126 229 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 LIPGQ9Y5X9 500 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 CEP250Q9BV73 2442 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 A0A1B0GTQ1 180 aa11.08□□□□□ -0.64
CPNE4-201ENST00000429747 H7BYZ3 331 aa11.08□□□□□ -0.64
CPNE4-201ENST00000429747 RAB5AP20339 215 aa11.08□□□□□ -0.64
CPNE4-201ENST00000429747 ZNF808Q8N4W9 903 aaPredicted RBP11.08□□□□□ -0.64
CPNE4-201ENST00000429747 CADM4Q8NFZ8 388 aa11.08□□□□□ -0.64
CPNE4-201ENST00000429747 APH1AQ96BI3 265 aa11.08□□□□□ -0.64
CPNE4-201ENST00000429747 CHST5Q9GZS9 411 aa11.08□□□□□ -0.64
CPNE4-201ENST00000429747 AQP7P3A6NL99 342 aa11.08□□□□□ -0.64
CPNE4-201ENST00000429747 LINC00271P0C7V0 271 aa11.08□□□□□ -0.64
CPNE4-201ENST00000429747 PABPC1L2AQ5JQF8 200 aa11.08□□□□□ -0.64
CPNE4-201ENST00000429747 OR2M3Q8NG83 312 aa11.08□□□□□ -0.64
CPNE4-201ENST00000429747 OR11L1Q8NGX0 322 aa11.08□□□□□ -0.64
CPNE4-201ENST00000429747 FAM234AQ9H0X4 552 aa11.08□□□□□ -0.64
CPNE4-201ENST00000429747 MIOXQ9UGB7 285 aa11.08□□□□□ -0.64
CPNE4-201ENST00000429747 THSD7BQ9C0I4 1608 aa11.08□□□□□ -0.64
CPNE4-201ENST00000429747 CCDC187A0A096LP49 1063 aa11.08□□□□□ -0.64
CPNE4-201ENST00000429747 TMEM267Q0VDI3 215 aaPredicted RBP11.08□□□□□ -0.64
CPNE4-201ENST00000429747 PLAC9Q5JTB6 97 aa11.08□□□□□ -0.64
CPNE4-201ENST00000429747 ZDHHC23Q8IYP9 409 aa11.08□□□□□ -0.64
CPNE4-201ENST00000429747 C17orf78Q8N4C9 275 aa11.08□□□□□ -0.64
CPNE4-201ENST00000429747 HPSE2Q8WWQ2 592 aa11.08□□□□□ -0.64
CPNE4-201ENST00000429747 ZNF501Q96CX3 271 aaPredicted RBP11.08□□□□□ -0.64
CPNE4-201ENST00000429747 MYOZ1Q9NP98 299 aaPredicted RBP11.08□□□□□ -0.64
CPNE4-201ENST00000429747 FSCN3Q9NQT6 498 aa11.08□□□□□ -0.64
CPNE4-201ENST00000429747 PTGER4P35408 488 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 PSMB3P49720 205 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 TAS2R30P59541 319 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 ARG2P78540 354 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 CATR1Q13166 79 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 FHL1Q13642 323 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 PDLIM3Q53GG5 364 aaPredicted RBP11.07□□□□□ -0.64
CPNE4-201ENST00000429747 IGSF11Q5DX21 431 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 FAM185AQ8N0U4 392 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 CNEP1R1Q8N9A8 125 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 ZNF610Q8N9Z0 462 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 AQP10Q96PS8 301 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 SMIM7Q9BQ49 75 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 UCK1Q9HA47 277 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 RCC2Q9P258 522 aaKnown RBP11.07□□□□□ -0.64
CPNE4-201ENST00000429747 AP4M1O00189 453 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 HMGB3O15347 200 aaKnown RBP11.07□□□□□ -0.64
CPNE4-201ENST00000429747 PGA4P0DJD7 388 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 PGA3P0DJD8 388 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 TGFBR3Q03167 851 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 TRIM61Q5EBN2 209 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 OR2V1Q8NHB1 315 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 NTNG2Q96CW9 530 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 ESRP2Q9H6T0 727 aaKnown RBP11.07□□□□□ -0.64
CPNE4-201ENST00000429747 P4HTMQ9NXG6 502 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 PSENENQ9NZ42 101 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 RNF150Q9ULK6 438 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 MPDZO75970 2070 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 NKX2-6A6NCS4 301 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 RBFOX3A6NFN3 312 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 PPP5D1E7EU14 171 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 HKR1P10072 659 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 CALCRP30988 508 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 BATFQ16520 125 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 SPATA46Q5T0L3 261 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 DHRS11Q6UWP2 260 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 EIF4E3Q8N5X7 224 aaKnown RBP11.07□□□□□ -0.64
CPNE4-201ENST00000429747 OR6S1Q8NH40 331 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 GCM1Q9NP62 436 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 HEATR5AQ86XA9 2040 aa11.07□□□□□ -0.64
CPNE4-201ENST00000429747 SNRNP200O75643 2136 aaKnown RBP11.07□□□□□ -0.64
CPNE4-201ENST00000429747 A0A1B0GTI1 187 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 CCL3P10147 92 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 FHITP49789 147 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 ERVK-16P61578 105 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 RPS16P62249 146 aaKnown RBP11.06□□□□□ -0.64
CPNE4-201ENST00000429747 C1QL2Q7Z5L3 287 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 THOC3Q96J01 351 aaKnown RBP11.06□□□□□ -0.64
CPNE4-201ENST00000429747 TMPRSS5Q9H3S3 457 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 ERRFI1Q9UJM3 462 aaPredicted RBP11.06□□□□□ -0.64
CPNE4-201ENST00000429747 NOTCH4Q99466 2003 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 DHRS7CA6NNS2 312 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 RNF212BA8MTL3 300 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 PPYP01298 95 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 ZNF735P0CB33 412 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 IGFBP3P17936 291 aaPredicted RBP11.06□□□□□ -0.64
CPNE4-201ENST00000429747 PMP22Q01453 160 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 CLN3Q13286 438 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms