RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 LGALS4P56470 323 aa14.94□□□□□ -0.02
PSPC1-202ENST00000427943 ALKBH1Q13686 389 aaKnown RBP14.94□□□□□ -0.02
PSPC1-202ENST00000427943 GALEQ14376 348 aa14.94□□□□□ -0.02
PSPC1-202ENST00000427943 PLA1AQ53H76 456 aa14.94□□□□□ -0.02
PSPC1-202ENST00000427943 KIAA2026Q5HYC2 2103 aa14.94□□□□□ -0.02
PSPC1-202ENST00000427943 LHFPL2Q6ZUX7 228 aa14.94□□□□□ -0.02
PSPC1-202ENST00000427943 RNF144BQ7Z419 303 aa14.94□□□□□ -0.02
PSPC1-202ENST00000427943 Q8IYB0 196 aa14.94□□□□□ -0.02
PSPC1-202ENST00000427943 FAM58AQ8N1B3 248 aa14.94□□□□□ -0.02
PSPC1-202ENST00000427943 PQLC1Q8N2U9 271 aa14.94□□□□□ -0.02
PSPC1-202ENST00000427943 ZNF676Q8N7Q3 588 aa14.94□□□□□ -0.02
PSPC1-202ENST00000427943 OR52N4Q8NGI2 321 aa14.94□□□□□ -0.02
PSPC1-202ENST00000427943 OR5D18Q8NGL1 313 aa14.94□□□□□ -0.02
PSPC1-202ENST00000427943 SNX22Q96L94 193 aa14.94□□□□□ -0.02
PSPC1-202ENST00000427943 OPALINQ96PE5 141 aa14.94□□□□□ -0.02
PSPC1-202ENST00000427943 MEGF9Q9H1U4 602 aa14.94□□□□□ -0.02
PSPC1-202ENST00000427943 ISG20L2Q9H9L3 353 aaKnown RBP14.94□□□□□ -0.02
PSPC1-202ENST00000427943 ARG1P05089 322 aa14.93□□□□□ -0.02
PSPC1-202ENST00000427943 ZNF728P0DKX0 622 aa14.93□□□□□ -0.02
PSPC1-202ENST00000427943 GABRR1P24046 479 aa14.93□□□□□ -0.02
PSPC1-202ENST00000427943 GRK1Q15835 563 aa14.93□□□□□ -0.02
PSPC1-202ENST00000427943 SLC35E4Q6ICL7 350 aa14.93□□□□□ -0.02
PSPC1-202ENST00000427943 ZBTB49Q6ZSB9 765 aa14.93□□□□□ -0.02
PSPC1-202ENST00000427943 C10orf67Q8IYJ2 551 aa14.93□□□□□ -0.02
PSPC1-202ENST00000427943 PPP1R35Q8TAP8 253 aa14.93□□□□□ -0.02
PSPC1-202ENST00000427943 SPSB1Q96BD6 273 aa14.93□□□□□ -0.02
PSPC1-202ENST00000427943 MRPL48Q96GC5 212 aaKnown RBP14.93□□□□□ -0.02
PSPC1-202ENST00000427943 TCF7L1Q9HCS4 588 aa14.93□□□□□ -0.02
PSPC1-202ENST00000427943 IGKV1-12A0A0C4DH73 117 aa14.92□□□□□ -0.02
PSPC1-202ENST00000427943 M0QZ24 198 aa14.92□□□□□ -0.02
PSPC1-202ENST00000427943 TIMM23O14925 209 aa14.92□□□□□ -0.02
PSPC1-202ENST00000427943 KCNAB3O43448 404 aa14.92□□□□□ -0.02
PSPC1-202ENST00000427943 PSPNO60542 156 aa14.92□□□□□ -0.02
PSPC1-202ENST00000427943 IGKV1D-12P01611 117 aa14.92□□□□□ -0.02
PSPC1-202ENST00000427943 IGHV1-8P0DP01 117 aa14.92□□□□□ -0.02
PSPC1-202ENST00000427943 PEX2P28328 305 aa14.92□□□□□ -0.02
PSPC1-202ENST00000427943 PDZK1IP1Q13113 114 aa14.92□□□□□ -0.02
PSPC1-202ENST00000427943 ASPHD2Q6ICH7 369 aa14.92□□□□□ -0.02
PSPC1-202ENST00000427943 DYNAPQ8N1N2 210 aa14.92□□□□□ -0.02
PSPC1-202ENST00000427943 OR4S1Q8NGB4 309 aa14.92□□□□□ -0.02
PSPC1-202ENST00000427943 RHOXF1Q8NHV9 184 aa14.92□□□□□ -0.02
PSPC1-202ENST00000427943 ZNF714Q96N38 554 aa14.92□□□□□ -0.02
PSPC1-202ENST00000427943 FAM118AQ9NWS6 357 aa14.92□□□□□ -0.02
PSPC1-202ENST00000427943 ERVK13-1Q9NX77 482 aa14.92□□□□□ -0.02
PSPC1-202ENST00000427943 SIGLEC9Q9Y336 463 aa14.92□□□□□ -0.02
PSPC1-202ENST00000427943 CMYA5Q8N3K9 4069 aa14.92□□□□□ -0.02
PSPC1-202ENST00000427943 LOC100130705A0A1B0GUX0 176 aa14.91□□□□□ -0.02
PSPC1-202ENST00000427943 ODF3BA8MYP8 253 aa14.91□□□□□ -0.02
PSPC1-202ENST00000427943 E9PI62 339 aa14.91□□□□□ -0.02
PSPC1-202ENST00000427943 SIRPB1O00241 398 aa14.91□□□□□ -0.02
PSPC1-202ENST00000427943 EBAG9O00559 213 aa14.91□□□□□ -0.02
PSPC1-202ENST00000427943 MPZL2O60487 215 aa14.91□□□□□ -0.02
PSPC1-202ENST00000427943 FADS2O95864 444 aaKnown RBP14.91□□□□□ -0.02
PSPC1-202ENST00000427943 GABRA5P31644 462 aa14.91□□□□□ -0.02
PSPC1-202ENST00000427943 SYS1Q8N2H4 156 aa14.91□□□□□ -0.02
PSPC1-202ENST00000427943 OR52I1Q8NGK6 324 aa14.91□□□□□ -0.02
PSPC1-202ENST00000427943 OR13D1Q8NGV5 346 aa14.91□□□□□ -0.02
PSPC1-202ENST00000427943 APH1BQ8WW43 257 aa14.91□□□□□ -0.02
PSPC1-202ENST00000427943 Q96MT0 163 aa14.91□□□□□ -0.02
PSPC1-202ENST00000427943 ZNF649Q9BS31 505 aa14.91□□□□□ -0.02
PSPC1-202ENST00000427943 NEK6Q9HC98 313 aa14.91□□□□□ -0.02
PSPC1-202ENST00000427943 HMG20AQ9NP66 347 aa14.91□□□□□ -0.02
PSPC1-202ENST00000427943 GSTK1Q9Y2Q3 226 aa14.91□□□□□ -0.02
PSPC1-202ENST00000427943 hADV38S2A0JD32 116 aa14.9□□□□□ -0.02
PSPC1-202ENST00000427943 CHST1O43916 411 aa14.9□□□□□ -0.02
PSPC1-202ENST00000427943 BAG2O95816 211 aa14.9□□□□□ -0.02
PSPC1-202ENST00000427943 RBP4P02753 201 aa14.9□□□□□ -0.02
PSPC1-202ENST00000427943 OR3A1P47881 315 aa14.9□□□□□ -0.02
PSPC1-202ENST00000427943 MEF2CQ06413 473 aaPredicted RBP14.9□□□□□ -0.02
PSPC1-202ENST00000427943 RAB40BQ12829 278 aa14.9□□□□□ -0.02
PSPC1-202ENST00000427943 DYNC1I2Q13409 638 aaKnown RBP14.9□□□□□ -0.02
PSPC1-202ENST00000427943 ZNF146Q15072 292 aa14.9□□□□□ -0.02
PSPC1-202ENST00000427943 AANATQ16613 207 aa14.9□□□□□ -0.02
PSPC1-202ENST00000427943 SPIN3Q5JUX0 258 aa14.9□□□□□ -0.02
PSPC1-202ENST00000427943 LDLRAD2Q5SZI1 272 aa14.9□□□□□ -0.02
PSPC1-202ENST00000427943 ZNF626Q68DY1 528 aa14.9□□□□□ -0.02
PSPC1-202ENST00000427943 CRIP3Q6Q6R5 217 aa14.9□□□□□ -0.02
PSPC1-202ENST00000427943 PIFOQ8TCI5 191 aa14.9□□□□□ -0.02
PSPC1-202ENST00000427943 PDCD1LG2Q9BQ51 273 aa14.9□□□□□ -0.02
PSPC1-202ENST00000427943 ZCCHC4Q9H5U6 513 aa14.9□□□□□ -0.02
PSPC1-202ENST00000427943 EXOSC4Q9NPD3 245 aaKnown RBP14.9□□□□□ -0.02
PSPC1-202ENST00000427943 LINC00312Q9Y6C7 94 aa14.9□□□□□ -0.02
PSPC1-202ENST00000427943 FAM90A8PA6NJQ4 464 aa14.89□□□□□ -0.03
PSPC1-202ENST00000427943 ZFPL1O95159 310 aa14.89□□□□□ -0.03
PSPC1-202ENST00000427943 TSPAN15O95858 294 aa14.89□□□□□ -0.03
PSPC1-202ENST00000427943 OR2H2O95918 312 aa14.89□□□□□ -0.03
PSPC1-202ENST00000427943 HCKP08631 526 aa14.89□□□□□ -0.03
PSPC1-202ENST00000427943 RAB13P51153 203 aa14.89□□□□□ -0.03
PSPC1-202ENST00000427943 FAM189A2Q15884 450 aa14.89□□□□□ -0.03
PSPC1-202ENST00000427943 SMN1Q16637 294 aaKnown RBP14.89□□□□□ -0.03
PSPC1-202ENST00000427943 LPCAT4Q643R3 524 aa14.89□□□□□ -0.03
PSPC1-202ENST00000427943 TRAPPC6BQ86SZ2 158 aa14.89□□□□□ -0.03
PSPC1-202ENST00000427943 OR4C13Q8NGP0 309 aa14.89□□□□□ -0.03
PSPC1-202ENST00000427943 TSEN15Q8WW01 171 aaKnown RBP14.89□□□□□ -0.03
PSPC1-202ENST00000427943 MYCBPQ99417 103 aaPredicted RBP14.89□□□□□ -0.03
PSPC1-202ENST00000427943 NKX3-1Q99801 234 aaPredicted RBP14.89□□□□□ -0.03
PSPC1-202ENST00000427943 COMMD4Q9H0A8 199 aa14.89□□□□□ -0.03
PSPC1-202ENST00000427943 SEBOXQ9HB31 216 aaPredicted RBP14.89□□□□□ -0.03
PSPC1-202ENST00000427943 INPP5EQ9NRR6 644 aa14.89□□□□□ -0.03
PSPC1-202ENST00000427943 GLS2Q9UI32 602 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms