RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 FABP5Q01469 135 aa12.29□□□□□ -0.44
TMEM248-204ENST00000424964 PAX2Q02962 417 aa12.29□□□□□ -0.44
TMEM248-204ENST00000424964 COL10A1Q03692 680 aa12.29□□□□□ -0.44
TMEM248-204ENST00000424964 RSU1Q15404 277 aa12.29□□□□□ -0.44
TMEM248-204ENST00000424964 SSX1Q16384 188 aa12.29□□□□□ -0.44
TMEM248-204ENST00000424964 TMEM91Q6ZNR0 172 aa12.29□□□□□ -0.44
TMEM248-204ENST00000424964 ZNF561Q8N587 486 aa12.29□□□□□ -0.44
TMEM248-204ENST00000424964 PXT1Q8NFP0 134 aa12.29□□□□□ -0.44
TMEM248-204ENST00000424964 MRI1Q9BV20 369 aa12.29□□□□□ -0.44
TMEM248-204ENST00000424964 TMPRSS13Q9BYE2 586 aa12.29□□□□□ -0.44
TMEM248-204ENST00000424964 SLITRK2Q9H156 845 aa12.29□□□□□ -0.44
TMEM248-204ENST00000424964 RHOFQ9HBH0 211 aa12.29□□□□□ -0.44
TMEM248-204ENST00000424964 HMG20AQ9NP66 347 aa12.29□□□□□ -0.44
TMEM248-204ENST00000424964 IL36RNQ9UBH0 155 aa12.29□□□□□ -0.44
TMEM248-204ENST00000424964 METRNQ9UJH8 293 aa12.29□□□□□ -0.44
TMEM248-204ENST00000424964 GSTK1Q9Y2Q3 226 aa12.29□□□□□ -0.44
TMEM248-204ENST00000424964 KIR2DS1A0A191URI9 304 aa12.28□□□□□ -0.44
TMEM248-204ENST00000424964 CCRL2O00421 344 aa12.28□□□□□ -0.44
TMEM248-204ENST00000424964 SH2D1BO14796 132 aa12.28□□□□□ -0.44
TMEM248-204ENST00000424964 SC5DO75845 299 aa12.28□□□□□ -0.44
TMEM248-204ENST00000424964 CDRT1O95170 752 aa12.28□□□□□ -0.44
TMEM248-204ENST00000424964 HTR3BO95264 441 aa12.28□□□□□ -0.44
TMEM248-204ENST00000424964 HAND1O96004 215 aa12.28□□□□□ -0.44
TMEM248-204ENST00000424964 UCHL1P09936 223 aa12.28□□□□□ -0.44
TMEM248-204ENST00000424964 SRMP19623 302 aa12.28□□□□□ -0.44
TMEM248-204ENST00000424964 GP2P55259 537 aaKnown RBP12.28□□□□□ -0.44
TMEM248-204ENST00000424964 CAV3P56539 151 aa12.28□□□□□ -0.44
TMEM248-204ENST00000424964 NEDD8Q15843 81 aa12.28□□□□□ -0.44
TMEM248-204ENST00000424964 CDH26Q8IXH8 852 aa12.28□□□□□ -0.44
TMEM248-204ENST00000424964 NKAIN3Q8N8D7 197 aa12.28□□□□□ -0.44
TMEM248-204ENST00000424964 ASCC1Q8N9N2 400 aaKnown RBP12.28□□□□□ -0.44
TMEM248-204ENST00000424964 TSPAN14Q8NG11 270 aa12.28□□□□□ -0.44
TMEM248-204ENST00000424964 OR10K1Q8NGX5 313 aa12.28□□□□□ -0.44
TMEM248-204ENST00000424964 PHYHIPQ92561 330 aa12.28□□□□□ -0.44
TMEM248-204ENST00000424964 MUL1Q969V5 352 aa12.28□□□□□ -0.44
TMEM248-204ENST00000424964 NR1H4Q96RI1 486 aaPredicted RBP12.28□□□□□ -0.44
TMEM248-204ENST00000424964 METTL9Q9H1A3 318 aa12.28□□□□□ -0.44
TMEM248-204ENST00000424964 PPIL3Q9H2H8 161 aaKnown RBP12.28□□□□□ -0.44
TMEM248-204ENST00000424964 NDUFB11Q9NX14 153 aa12.28□□□□□ -0.44
TMEM248-204ENST00000424964 AUP1Q9Y679 476 aa12.28□□□□□ -0.44
TMEM248-204ENST00000424964 A0A087WXM4 84 aa12.27□□□□□ -0.45
TMEM248-204ENST00000424964 ARL6IP5O75915 188 aa12.27□□□□□ -0.45
TMEM248-204ENST00000424964 AVPP01185 164 aa12.27□□□□□ -0.45
TMEM248-204ENST00000424964 CSTBP04080 98 aaKnown RBP12.27□□□□□ -0.45
TMEM248-204ENST00000424964 LIPFP07098 398 aa12.27□□□□□ -0.45
TMEM248-204ENST00000424964 MTNR1BP49286 362 aa12.27□□□□□ -0.45
TMEM248-204ENST00000424964 BMXP51813 675 aa12.27□□□□□ -0.45
TMEM248-204ENST00000424964 FGF12P61328 243 aa12.27□□□□□ -0.45
TMEM248-204ENST00000424964 PAX8Q06710 450 aa12.27□□□□□ -0.45
TMEM248-204ENST00000424964 SCN1BQ07699 218 aa12.27□□□□□ -0.45
TMEM248-204ENST00000424964 C11orf91Q3C1V1 193 aa12.27□□□□□ -0.45
TMEM248-204ENST00000424964 SPIN3Q5JUX0 258 aa12.27□□□□□ -0.45
TMEM248-204ENST00000424964 CNTD2Q9H8S5 307 aa12.27□□□□□ -0.45
TMEM248-204ENST00000424964 EXOSC4Q9NPD3 245 aaKnown RBP12.27□□□□□ -0.45
TMEM248-204ENST00000424964 RPUSD1Q9UJJ7 312 aaKnown RBP12.27□□□□□ -0.45
TMEM248-204ENST00000424964 MRPS28Q9Y2Q9 187 aaKnown RBP12.27□□□□□ -0.45
TMEM248-204ENST00000424964 TK1P04183 234 aa12.26□□□□□ -0.45
TMEM248-204ENST00000424964 SRD5A1P18405 259 aa12.26□□□□□ -0.45
TMEM248-204ENST00000424964 ADRA2CP18825 462 aa12.26□□□□□ -0.45
TMEM248-204ENST00000424964 SERPINA2P20848 420 aa12.26□□□□□ -0.45
TMEM248-204ENST00000424964 CALRP27797 417 aaKnown RBP12.26□□□□□ -0.45
TMEM248-204ENST00000424964 ZNF146Q15072 292 aa12.26□□□□□ -0.45
TMEM248-204ENST00000424964 SLC22A6Q4U2R8 563 aa12.26□□□□□ -0.45
TMEM248-204ENST00000424964 GLT8D1Q68CQ7 371 aa12.26□□□□□ -0.45
TMEM248-204ENST00000424964 AWAT2Q6E213 333 aa12.26□□□□□ -0.45
TMEM248-204ENST00000424964 ELP2Q6IA86 826 aa12.26□□□□□ -0.45
TMEM248-204ENST00000424964 ASCL4Q6XD76 172 aa12.26□□□□□ -0.45
TMEM248-204ENST00000424964 C1orf229Q6ZS94 237 aaPredicted RBP12.26□□□□□ -0.45
TMEM248-204ENST00000424964 LRRTM1Q86UE6 522 aa12.26□□□□□ -0.45
TMEM248-204ENST00000424964 TEX29Q8N6K0 151 aa12.26□□□□□ -0.45
TMEM248-204ENST00000424964 DACT3Q96B18 629 aaPredicted RBP12.26□□□□□ -0.45
TMEM248-204ENST00000424964 FOXRED1Q96CU9 486 aaPredicted RBP12.26□□□□□ -0.45
TMEM248-204ENST00000424964 SNX22Q96L94 193 aa12.26□□□□□ -0.45
TMEM248-204ENST00000424964 DCTN5Q9BTE1 182 aa12.26□□□□□ -0.45
TMEM248-204ENST00000424964 FAM234AQ9H0X4 552 aa12.26□□□□□ -0.45
TMEM248-204ENST00000424964 ZNF696Q9H7X3 374 aa12.26□□□□□ -0.45
TMEM248-204ENST00000424964 SEBOXQ9HB31 216 aaPredicted RBP12.26□□□□□ -0.45
TMEM248-204ENST00000424964 VCX3AQ9NNX9 186 aa12.26□□□□□ -0.45
TMEM248-204ENST00000424964 PCDHB16Q9NRJ7 776 aa12.26□□□□□ -0.45
TMEM248-204ENST00000424964 OPN4Q9UHM6 478 aa12.26□□□□□ -0.45
TMEM248-204ENST00000424964 NSD1Q96L73 2696 aaPredicted RBP12.25□□□□□ -0.45
TMEM248-204ENST00000424964 A0A1W2PQ09 198 aa12.25□□□□□ -0.45
TMEM248-204ENST00000424964 K7N7A8 449 aa12.25□□□□□ -0.45
TMEM248-204ENST00000424964 SIRPB1O00241 398 aa12.25□□□□□ -0.45
TMEM248-204ENST00000424964 DEGS1O15121 323 aa12.25□□□□□ -0.45
TMEM248-204ENST00000424964 PPIAL4GP0DN37 164 aa12.25□□□□□ -0.45
TMEM248-204ENST00000424964 ZNF44P15621 663 aa12.25□□□□□ -0.45
TMEM248-204ENST00000424964 GABRR1P24046 479 aa12.25□□□□□ -0.45
TMEM248-204ENST00000424964 ARF6P62330 175 aa12.25□□□□□ -0.45
TMEM248-204ENST00000424964 GPR176Q14439 515 aa12.25□□□□□ -0.45
TMEM248-204ENST00000424964 SYT6Q5T7P8 510 aaPredicted RBP12.25□□□□□ -0.45
TMEM248-204ENST00000424964 GLIPR1L1Q6UWM5 242 aa12.25□□□□□ -0.45
TMEM248-204ENST00000424964 FAM185AQ8N0U4 392 aa12.25□□□□□ -0.45
TMEM248-204ENST00000424964 OR4M1Q8NGD0 313 aa12.25□□□□□ -0.45
TMEM248-204ENST00000424964 OR4D6Q8NGJ1 314 aa12.25□□□□□ -0.45
TMEM248-204ENST00000424964 OR5D13Q8NGL4 314 aa12.25□□□□□ -0.45
TMEM248-204ENST00000424964 NANPQ8TBE9 248 aa12.25□□□□□ -0.45
TMEM248-204ENST00000424964 UQCC2Q9BRT2 126 aa12.25□□□□□ -0.45
TMEM248-204ENST00000424964 IL36GQ9NZH8 169 aa12.25□□□□□ -0.45
TMEM248-204ENST00000424964 ONECUT1Q9UBC0 465 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms