RNA–Protein interactions for RNA: ENST00000422453.6

CNBP-201, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNBP, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-201ENST00000422453 RFPL4AA6NLU0 287 aa11.52□□□□□ -0.57
CNBP-201ENST00000422453 RFPL4AL1F8VTS6 287 aa11.52□□□□□ -0.57
CNBP-201ENST00000422453 MMP9P14780 707 aa11.52□□□□□ -0.57
CNBP-201ENST00000422453 PRTN3P24158 256 aa11.52□□□□□ -0.57
CNBP-201ENST00000422453 CCR9P51686 369 aa11.52□□□□□ -0.57
CNBP-201ENST00000422453 DEFA1P59665 94 aa11.52□□□□□ -0.57
CNBP-201ENST00000422453 DEFA3P59666 94 aa11.52□□□□□ -0.57
CNBP-201ENST00000422453 SLC35A2P78381 396 aa11.52□□□□□ -0.57
CNBP-201ENST00000422453 UBE2V2Q15819 145 aa11.52□□□□□ -0.57
CNBP-201ENST00000422453 FDX2Q6P4F2 183 aa11.52□□□□□ -0.57
CNBP-201ENST00000422453 ZNRF1Q8ND25 227 aa11.52□□□□□ -0.57
CNBP-201ENST00000422453 LY6G5BQ8NDX9 201 aa11.52□□□□□ -0.57
CNBP-201ENST00000422453 LHX4Q969G2 390 aa11.52□□□□□ -0.57
CNBP-201ENST00000422453 SLC25A28Q96A46 364 aa11.52□□□□□ -0.57
CNBP-201ENST00000422453 PELI1Q96FA3 418 aa11.52□□□□□ -0.57
CNBP-201ENST00000422453 DUX5Q96PT3 197 aa11.52□□□□□ -0.57
CNBP-201ENST00000422453 TBX15Q96SF7 602 aa11.52□□□□□ -0.57
CNBP-201ENST00000422453 PKIBQ9C010 78 aa11.52□□□□□ -0.57
CNBP-201ENST00000422453 SIRPDQ9H106 197 aa11.52□□□□□ -0.57
CNBP-201ENST00000422453 ZMAT3Q9HA38 289 aaKnown RBP11.52□□□□□ -0.57
CNBP-201ENST00000422453 CCDC59Q9P031 241 aaKnown RBP11.52□□□□□ -0.57
CNBP-201ENST00000422453 HHLA2Q9UM44 414 aa11.52□□□□□ -0.57
CNBP-201ENST00000422453 DNAJC9-AS1A6NH13 148 aa11.51□□□□□ -0.57
CNBP-201ENST00000422453 NOS1APO75052 506 aaPredicted RBP11.51□□□□□ -0.57
CNBP-201ENST00000422453 ISG15P05161 165 aa11.51□□□□□ -0.57
CNBP-201ENST00000422453 NAT1P18440 290 aa11.51□□□□□ -0.57
CNBP-201ENST00000422453 MPZP25189 248 aa11.51□□□□□ -0.57
CNBP-201ENST00000422453 GBX2P52951 348 aaPredicted RBP11.51□□□□□ -0.57
CNBP-201ENST00000422453 CAV3P56539 151 aa11.51□□□□□ -0.57
CNBP-201ENST00000422453 NANOS3P60323 173 aaKnown RBP11.51□□□□□ -0.57
CNBP-201ENST00000422453 IL24Q13007 206 aa11.51□□□□□ -0.57
CNBP-201ENST00000422453 MRPL28Q13084 256 aaKnown RBP11.51□□□□□ -0.57
CNBP-201ENST00000422453 ALKBH1Q13686 389 aaKnown RBP11.51□□□□□ -0.57
CNBP-201ENST00000422453 STEAP3Q658P3 488 aa11.51□□□□□ -0.57
CNBP-201ENST00000422453 CALHM1Q8IU99 346 aa11.51□□□□□ -0.57
CNBP-201ENST00000422453 BATF2Q8N1L9 274 aa11.51□□□□□ -0.57
CNBP-201ENST00000422453 SYS1Q8N2H4 156 aa11.51□□□□□ -0.57
CNBP-201ENST00000422453 POC5Q8NA72 575 aa11.51□□□□□ -0.57
CNBP-201ENST00000422453 OR52I1Q8NGK6 324 aa11.51□□□□□ -0.57
CNBP-201ENST00000422453 OR13C3Q8NGS6 347 aa11.51□□□□□ -0.57
CNBP-201ENST00000422453 MCFD2Q8NI22 146 aa11.51□□□□□ -0.57
CNBP-201ENST00000422453 SETD6Q8TBK2 473 aa11.51□□□□□ -0.57
CNBP-201ENST00000422453 SGCDQ92629 289 aa11.51□□□□□ -0.57
CNBP-201ENST00000422453 FGGYQ96C11 551 aa11.51□□□□□ -0.57
CNBP-201ENST00000422453 ZNF48Q96MX3 618 aaPredicted RBP11.51□□□□□ -0.57
CNBP-201ENST00000422453 ERVK13-1Q9NX77 482 aa11.51□□□□□ -0.57
CNBP-201ENST00000422453 OR14J1Q9UGF5 321 aa11.51□□□□□ -0.57
CNBP-201ENST00000422453 CENPVL3A0A0U1RRI6 287 aa11.5□□□□□ -0.57
CNBP-201ENST00000422453 FAM25AB3EWG3 89 aa11.5□□□□□ -0.57
CNBP-201ENST00000422453 FAM25CB3EWG5 89 aa11.5□□□□□ -0.57
CNBP-201ENST00000422453 FAM25GB3EWG6 89 aa11.5□□□□□ -0.57
CNBP-201ENST00000422453 CCNKO75909 580 aa11.5□□□□□ -0.57
CNBP-201ENST00000422453 CYB5AP00167 134 aa11.5□□□□□ -0.57
CNBP-201ENST00000422453 IGHA1P01876 353 aa11.5□□□□□ -0.57
CNBP-201ENST00000422453 PRDX2P32119 198 aa11.5□□□□□ -0.57
CNBP-201ENST00000422453 RBP2P50120 134 aa11.5□□□□□ -0.57
CNBP-201ENST00000422453 ATP1B3P54709 279 aa11.5□□□□□ -0.57
CNBP-201ENST00000422453 UBE2UQ5VVX9 321 aa11.5□□□□□ -0.57
CNBP-201ENST00000422453 RSBN1Q5VWQ0 802 aaPredicted RBP11.5□□□□□ -0.57
CNBP-201ENST00000422453 RUSC1-AS1Q66K80 236 aa11.5□□□□□ -0.57
CNBP-201ENST00000422453 VMO1Q7Z5L0 202 aa11.5□□□□□ -0.57
CNBP-201ENST00000422453 ZNF561Q8N587 486 aa11.5□□□□□ -0.57
CNBP-201ENST00000422453 KIR3DL3Q8N743 410 aa11.5□□□□□ -0.57
CNBP-201ENST00000422453 ADAT3Q96EY9 351 aaPredicted RBP11.5□□□□□ -0.57
CNBP-201ENST00000422453 SDSLQ96GA7 329 aa11.5□□□□□ -0.57
CNBP-201ENST00000422453 NRIP2Q9BQI9 281 aa11.5□□□□□ -0.57
CNBP-201ENST00000422453 CCDC32Q9BV29 185 aa11.5□□□□□ -0.57
CNBP-201ENST00000422453 ISG20L2Q9H9L3 353 aaKnown RBP11.5□□□□□ -0.57
CNBP-201ENST00000422453 MAB21L2Q9Y586 359 aa11.5□□□□□ -0.57
CNBP-201ENST00000422453 SOX21Q9Y651 276 aaPredicted RBP11.5□□□□□ -0.57
CNBP-201ENST00000422453 IGHV1-69DA0A0B4J2H0 117 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 PNMA8CA0A1B0GUJ8 204 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 IRGMA1A4Y4 181 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 IGHV1-69P01742 117 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 PRKACBP22694 351 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 TGFBR2P37173 567 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 TUSC1Q2TAM9 212 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 DEFB112Q30KQ8 113 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 SNX29P2Q8IUI4 249 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 PDZD9Q8IXQ8 264 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 DNAAF1Q8NEP3 725 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 C8orf46Q8TAG6 207 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 HAVCR2Q8TDQ0 301 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 APH1BQ8WW43 257 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 RNF166Q96A37 237 aaPredicted RBP11.49□□□□□ -0.57
CNBP-201ENST00000422453 CEP19Q96LK0 163 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 COMMD4Q9H0A8 199 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 MRPS18AQ9NVS2 196 aaKnown RBP11.49□□□□□ -0.57
CNBP-201ENST00000422453 SCN3BQ9NY72 215 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 ZNF222Q9UK12 451 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 TRBV23-1A0A0A0MS06 115 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 LOC105371267A0A1B0GV96 52 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 MDFIC2A0A1B0GVS7 189 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 CRYZL1O95825 349 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 APOA1P02647 267 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 MTCP1P56278 107 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 GUCA2AQ02747 115 aa11.49□□□□□ -0.57
CNBP-201ENST00000422453 SMN1Q16637 294 aaKnown RBP11.49□□□□□ -0.57
CNBP-201ENST00000422453 CCBE1Q6UXH8 406 aaPredicted RBP11.49□□□□□ -0.57
CNBP-201ENST00000422453 SLC25A26Q70HW3 274 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms