RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 DBTP11182 482 aaKnown RBP8.93□□□□□ -0.98
SSBP3-206ENST00000420121 DUSP1P28562 367 aa8.93□□□□□ -0.98
SSBP3-206ENST00000420121 RBP2P50120 134 aa8.93□□□□□ -0.98
SSBP3-206ENST00000420121 EFNB2P52799 333 aa8.93□□□□□ -0.98
SSBP3-206ENST00000420121 ZNF146Q15072 292 aa8.93□□□□□ -0.98
SSBP3-206ENST00000420121 ZNF626Q68DY1 528 aa8.93□□□□□ -0.98
SSBP3-206ENST00000420121 CCBE1Q6UXH8 406 aaPredicted RBP8.93□□□□□ -0.98
SSBP3-206ENST00000420121 TPRX1Q8N7U7 411 aa8.93□□□□□ -0.98
SSBP3-206ENST00000420121 OR4S1Q8NGB4 309 aa8.93□□□□□ -0.98
SSBP3-206ENST00000420121 OR11H6Q8NGC7 330 aa8.93□□□□□ -0.98
SSBP3-206ENST00000420121 RHOXF1Q8NHV9 184 aa8.93□□□□□ -0.98
SSBP3-206ENST00000420121 EMG1Q92979 244 aaKnown RBP8.93□□□□□ -0.98
SSBP3-206ENST00000420121 C4orf36Q96KX1 117 aa8.93□□□□□ -0.98
SSBP3-206ENST00000420121 SNX22Q96L94 193 aa8.93□□□□□ -0.98
SSBP3-206ENST00000420121 ISG20L2Q9H9L3 353 aaKnown RBP8.93□□□□□ -0.98
SSBP3-206ENST00000420121 ORC6Q9Y5N6 252 aa8.93□□□□□ -0.98
SSBP3-206ENST00000420121 E9PI62 339 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 J3QLW9 94 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 M0QZ24 198 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 TIMM23O14925 209 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 SERPINA3P01011 423 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 MT-ND2P03891 347 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 HTR1AP08908 422 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 IGHV1-8P0DP01 117 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 CALCBP10092 127 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 ZNF19P17023 458 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 KIR2DS4P43632 304 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 OR3A1P47881 315 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 POU3F4P49335 361 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 ATP1B3P54709 279 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 EDDM3BP56851 147 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 MEF2CQ06413 473 aaPredicted RBP8.92□□□□□ -0.98
SSBP3-206ENST00000420121 PDZK1IP1Q13113 114 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 ALKBH1Q13686 389 aaKnown RBP8.92□□□□□ -0.98
SSBP3-206ENST00000420121 GALEQ14376 348 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 HIST2H2BDQ6DRA6 164 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 LHFPL2Q6ZUX7 228 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 GDPD3Q7L5L3 318 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 LHFPL3Q86UP9 236 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 Q8IYB0 196 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 FAM58AQ8N1B3 248 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 APH1BQ8WW43 257 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 RFT1Q96AA3 541 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 SPSB1Q96BD6 273 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 OPALINQ96PE5 141 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 SPACA5Q96QH8 159 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 CHST6Q9GZX3 395 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 MMP27Q9H306 513 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 TCF7L1Q9HCS4 588 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 S100A14Q9HCY8 104 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 HMG20AQ9NP66 347 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 AMBNQ9NP70 447 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 HHLA2Q9UM44 414 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 GMPPBQ9Y5P6 360 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 PLXNB1O43157 2135 aa8.92□□□□□ -0.98
SSBP3-206ENST00000420121 hCG_1809904A0A1W2PP81 198 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 A0A1W2PPE2 198 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 A0A1W2PR64 198 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 A0A1W2PRV1 198 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 MMP23AO75900 390 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 KDM4BO94953 1096 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 JUNBP17275 347 aaPredicted RBP8.91□□□□□ -0.98
SSBP3-206ENST00000420121 PRKACAP17612 351 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 PRKACBP22694 351 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 RAB13P51153 203 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 MTCP1P56278 107 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 ZP1P60852 638 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 ACTA2P62736 377 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 ACTG2P63267 376 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 DEFA6Q01524 100 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 EDDM3AQ14507 147 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 CCDC121Q6ZUS5 278 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 SYS1Q8N2H4 156 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 PQLC1Q8N2U9 271 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 OR13C9Q8NGT0 318 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 ZNF714Q96N38 554 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 C9orf16Q9BUW7 83 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 ALG8Q9BVK2 526 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 COMMD4Q9H0A8 199 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 RANBP3Q9H6Z4 567 aaPredicted RBP8.91□□□□□ -0.98
SSBP3-206ENST00000420121 MRPS18AQ9NVS2 196 aaKnown RBP8.91□□□□□ -0.98
SSBP3-206ENST00000420121 FAM118AQ9NWS6 357 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 ERVK13-1Q9NX77 482 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 TCF19Q9Y242 345 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 TBL2Q9Y4P3 447 aaKnown RBP8.91□□□□□ -0.98
SSBP3-206ENST00000420121 LINC00312Q9Y6C7 94 aa8.91□□□□□ -0.98
SSBP3-206ENST00000420121 LOC100130705A0A1B0GUX0 176 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 hADV38S2A0JD32 116 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 A6NDX4 124 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 SIRPB1O00241 398 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 WBP4O75554 376 aaKnown RBP8.9□□□□□ -0.98
SSBP3-206ENST00000420121 ZFPL1O95159 310 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 OR2H2O95918 312 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 ARG1P05089 322 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 LIMS3P0CW19 117 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 LIMS4P0CW20 117 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 ZNF20P17024 532 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 LMO1P25800 156 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 PEX2P28328 305 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 ERP29P30040 261 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms