RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 CAPZA1P52907 286 aa11.55□□□□□ -0.56
CPNE1-206ENST00000412056 CAV3P56539 151 aa11.55□□□□□ -0.56
CPNE1-206ENST00000412056 COL10A1Q03692 680 aa11.55□□□□□ -0.56
CPNE1-206ENST00000412056 SYT6Q5T7P8 510 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-206ENST00000412056 FIP1L1Q6UN15 594 aaKnown RBP11.55□□□□□ -0.56
CPNE1-206ENST00000412056 ASCL4Q6XD76 172 aa11.55□□□□□ -0.56
CPNE1-206ENST00000412056 C1orf229Q6ZS94 237 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-206ENST00000412056 BTN2A1Q7KYR7 527 aa11.55□□□□□ -0.56
CPNE1-206ENST00000412056 LYPD6Q86Y78 171 aa11.55□□□□□ -0.56
CPNE1-206ENST00000412056 ZNF561Q8N587 486 aa11.55□□□□□ -0.56
CPNE1-206ENST00000412056 NKAIN3Q8N8D7 197 aa11.55□□□□□ -0.56
CPNE1-206ENST00000412056 TSPAN14Q8NG11 270 aa11.55□□□□□ -0.56
CPNE1-206ENST00000412056 RAB40AQ8WXH6 277 aa11.55□□□□□ -0.56
CPNE1-206ENST00000412056 H1FXQ92522 213 aaKnown RBP11.55□□□□□ -0.56
CPNE1-206ENST00000412056 PHYHIPQ92561 330 aa11.55□□□□□ -0.56
CPNE1-206ENST00000412056 MUL1Q969V5 352 aa11.55□□□□□ -0.56
CPNE1-206ENST00000412056 SHARPINQ9H0F6 387 aa11.55□□□□□ -0.56
CPNE1-206ENST00000412056 CNTD2Q9H8S5 307 aa11.55□□□□□ -0.56
CPNE1-206ENST00000412056 ING4Q9UNL4 249 aa11.55□□□□□ -0.56
CPNE1-206ENST00000412056 GSTK1Q9Y2Q3 226 aa11.55□□□□□ -0.56
CPNE1-206ENST00000412056 A0A087WXM4 84 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 MEGF11A6BM72 1044 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 J3QLI3 93 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 CRLF1O75462 422 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 HTR3BO95264 441 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 NDUFB7P17568 137 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 SRMP19623 302 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 MTNR1BP49286 362 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 FGF12P61328 243 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 ZNF146Q15072 292 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 RSU1Q15404 277 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 SPIN3Q5JUX0 258 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 CD276Q5ZPR3 534 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 ELP2Q6IA86 826 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 CD200R1LQ6Q8B3 271 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 ASCC1Q8N9N2 400 aaKnown RBP11.54□□□□□ -0.56
CPNE1-206ENST00000412056 OR4D6Q8NGJ1 314 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 GFI1Q99684 422 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 DCTN5Q9BTE1 182 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 METTL9Q9H1A3 318 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 C7orf69Q9H7B7 122 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 RHOFQ9HBH0 211 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 OPN4Q9UHM6 478 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 RPUSD1Q9UJJ7 312 aaKnown RBP11.54□□□□□ -0.56
CPNE1-206ENST00000412056 MRPS28Q9Y2Q9 187 aaKnown RBP11.54□□□□□ -0.56
CPNE1-206ENST00000412056 KIAA2026Q5HYC2 2103 aa11.54□□□□□ -0.56
CPNE1-206ENST00000412056 NSD1Q96L73 2696 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-206ENST00000412056 KIR2DS1A0A191URI9 304 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 TRDV1A0A1B0GX56 115 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 A0A1W2PP11 408 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 TMEM82A0PJX8 343 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 SIRPB1O00241 398 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 ZNF737O75373 536 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 ARL6IP5O75915 188 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 CHRM2P08172 466 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 HNF1AP20823 631 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 SERPINA2P20848 420 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 CALRP27797 417 aaKnown RBP11.53□□□□□ -0.56
CPNE1-206ENST00000412056 PAX8Q06710 450 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 PDCD1Q15116 288 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 CHRFAM7AQ494W8 412 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 BTNL3Q6UXE8 466 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 CDH26Q8IXH8 852 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 NR1H4Q96RI1 486 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-206ENST00000412056 S100A13Q99584 98 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 MRI1Q9BV20 369 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 BEX2Q9BXY8 128 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 SLITRK2Q9H156 845 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 SEBOXQ9HB31 216 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-206ENST00000412056 EXOSC4Q9NPD3 245 aaKnown RBP11.53□□□□□ -0.56
CPNE1-206ENST00000412056 IL36GQ9NZH8 169 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 LPAR3Q9UBY5 353 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 CDC42EP3Q9UKI2 254 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 AUP1Q9Y679 476 aa11.53□□□□□ -0.56
CPNE1-206ENST00000412056 SHISA3A0PJX4 238 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 TRIM64CA6NLI5 447 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 K7N7A8 449 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 SH2D1BO14796 132 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 GPR37O15354 613 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 PSPNO60542 156 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 ECDO95905 644 aaPredicted RBP11.52□□□□□ -0.57
CPNE1-206ENST00000412056 OR2H2O95918 312 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 TK1P04183 234 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 SMIM18P0DKX4 95 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 HOXB4P17483 251 aaPredicted RBP11.52□□□□□ -0.57
CPNE1-206ENST00000412056 C11orf91Q3C1V1 193 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 PIGYQ3MUY2 71 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 SLC22A6Q4U2R8 563 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 GLT8D1Q68CQ7 371 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 AWAT2Q6E213 333 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 C22orf42Q6IC83 251 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 Q6P435 159 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 GLIPR1L1Q6UWM5 242 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 C17orf107Q6ZR85 190 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 LY6G5BQ8NDX9 201 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 Q8NFD4 153 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 C8orf46Q8TAG6 207 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 SNX22Q96L94 193 aa11.52□□□□□ -0.57
CPNE1-206ENST00000412056 C1orf147Q96MC9 270 aaPredicted RBP11.52□□□□□ -0.57
CPNE1-206ENST00000412056 UQCC2Q9BRT2 126 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms