RNA–Protein interactions for RNA: ENST00000411956.1

AP001056.1-201, humanhuman

TSL 3 BASIC

Gene AP001056.1, Length 821 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001056.1-201ENST00000411956 AP3S1Q92572 193 aa13.18□□□□□ -0.3
AP001056.1-201ENST00000411956 KCTD12Q96CX2 325 aaKnown RBP13.18□□□□□ -0.3
AP001056.1-201ENST00000411956 MRPS24Q96EL2 167 aaKnown RBP13.18□□□□□ -0.3
AP001056.1-201ENST00000411956 Q96M66 194 aa13.18□□□□□ -0.3
AP001056.1-201ENST00000411956 SELENOIQ9C0D9 397 aa13.18□□□□□ -0.3
AP001056.1-201ENST00000411956 NARFLQ9H6Q4 476 aa13.18□□□□□ -0.3
AP001056.1-201ENST00000411956 OR14J1Q9UGF5 321 aa13.18□□□□□ -0.3
AP001056.1-201ENST00000411956 ST3GAL6Q9Y274 331 aa13.18□□□□□ -0.3
AP001056.1-201ENST00000411956 ETV7Q9Y603 341 aa13.18□□□□□ -0.3
AP001056.1-201ENST00000411956 USF3Q68DE3 2245 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 RFPL4AA6NLU0 287 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 CEACAM18A8MTB9 384 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 RFPL4AL1F8VTS6 287 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 TNFRSF13BO14836 293 aaPredicted RBP13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 GEMIN2O14893 280 aaKnown RBP13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 HAND1O96004 215 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 SLC25A16P16260 332 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 AMY2BP19961 511 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 DUSP1P28562 367 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 EFNB2P52799 333 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 DYNC1I2Q13409 638 aaKnown RBP13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 DCDC5Q6ZRR9 648 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 LURAP1LQ8IV03 231 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 SPICQ8N5J4 248 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 CD177Q8N6Q3 437 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 Q96MF0 132 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 GAFA1Q96PS6 74 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 GAL3ST1Q99999 423 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 TM2D1Q9BX74 207 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 SLIRPQ9GZT3 109 aaKnown RBP13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 LPAR5Q9H1C0 372 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 METRNQ9UJH8 293 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 SPATA2Q9UM82 520 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 PDZD2O15018 2839 aa13.17□□□□□ -0.3
AP001056.1-201ENST00000411956 TACC2O95359 2948 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 CENPEQ02224 2701 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 A0A0A6YYD4 124 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 A0A1B0GW55 424 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 NKX6-3A6NJ46 265 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 DUX4L2P0CJ85 424 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 DUX4L3P0CJ86 424 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 DUX4L4P0CJ87 422 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 DUX4L5P0CJ88 424 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 DUX4L6P0CJ89 424 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 DUX4L7P0CJ90 424 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 RAB6AP20340 208 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 GABRA2P47869 451 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 IKZF1Q13422 519 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 PDCD1Q15116 288 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 TAF9Q16594 264 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 MPV17LQ2QL34 196 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 ATPAF1Q5TC12 328 aaPredicted RBP13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 Q6P435 159 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 DUX4L9Q6RFH8 374 aaPredicted RBP13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 METAP1DQ6UB28 335 aaPredicted RBP13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 LYPD2Q6UXB3 125 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 ZNF788Q6ZQV5 615 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 LINC00596Q86U02 117 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 ACOT12Q8WYK0 555 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 PTX4Q96A99 478 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 SLC25A38Q96DW6 304 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 SDSLQ96GA7 329 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 CCL13Q99616 98 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 NICN1Q9BSH3 213 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 URM1Q9BTM9 101 aaKnown RBP13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 DNTTIP1Q9H147 329 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 SEBOXQ9HB31 216 aaPredicted RBP13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 ZNF581Q9P0T4 197 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 CTSZQ9UBR2 303 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 DUX4Q9UBX2 424 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 GLS2Q9UI32 602 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 RAB22AQ9UL26 194 aa13.16□□□□□ -0.3
AP001056.1-201ENST00000411956 A0A096LNT2 108 aa13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 IGHV4-61A0A0C4DH41 118 aa13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 F5H0A9 414 aaPredicted RBP13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 SIRPB1O00241 398 aa13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 ADAM20O43506 726 aa13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 NDUFA2O43678 99 aa13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 OR2H2O95918 312 aa13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 ZNF44P15621 663 aa13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 RPS2P15880 293 aaKnown RBP13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 CPT2P23786 658 aa13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 GABRR1P24046 479 aa13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 PRDX2P32119 198 aa13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 COL10A1Q03692 680 aa13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 BIVMQ86UB2 503 aa13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 FAM216BQ8N7L0 139 aa13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 WFDC11Q8NEX6 87 aa13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 CLDND2Q8NHS1 167 aa13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 ZNF665Q9H7R5 613 aa13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 COMMD3Q9UBI1 195 aa13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 KAAG1Q9UBP8 84 aa13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 ITGB1BP2Q9UKP3 347 aa13.15□□□□□ -0.3
AP001056.1-201ENST00000411956 FAM90A10PA6NDY2 464 aa13.14□□□□□ -0.31
AP001056.1-201ENST00000411956 FAM90A18PA6NE21 464 aa13.14□□□□□ -0.31
AP001056.1-201ENST00000411956 FAM90A16PA6NEW6 464 aa13.14□□□□□ -0.31
AP001056.1-201ENST00000411956 FAM90A20PA6NIJ5 464 aa13.14□□□□□ -0.31
AP001056.1-201ENST00000411956 FAM90A8PA6NJQ4 464 aa13.14□□□□□ -0.31
AP001056.1-201ENST00000411956 FAM90A7PA6NKC0 464 aa13.14□□□□□ -0.31
AP001056.1-201ENST00000411956 FAM90A22PA8MWA6 464 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms