RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 F11P03951 625 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 KIR3DL2P43630 455 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 CDC34P49427 236 aaPredicted RBP8.85□□□□□ -0.99
PTPRM-203ENST00000400060 RPS20P60866 119 aaKnown RBP8.85□□□□□ -0.99
PTPRM-203ENST00000400060 LINC00597Q9H2U6 94 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 EFNB2P52799 333 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 PLGLB1Q02325 96 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 CLEC12BQ2HXU8 276 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 MYPOPQ86VE0 399 aaPredicted RBP8.85□□□□□ -0.99
PTPRM-203ENST00000400060 GBGT1Q8N5D6 347 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 NPEPL1Q8NDH3 523 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 OR2AE1Q8NHA4 323 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 WDYHV1Q96HA8 205 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 DICER1Q9UPY3 1922 aaKnown RBP8.85□□□□□ -0.99
PTPRM-203ENST00000400060 MIA3Q5JRA6 1907 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 BCAT2O15382 392 aaPredicted RBP8.85□□□□□ -0.99
PTPRM-203ENST00000400060 FABP2P12104 132 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 LYL1P12980 280 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 RPS11P62280 158 aaKnown RBP eCLIP8.85□□□□□ -0.99
PTPRM-203ENST00000400060 FDX2Q6P4F2 183 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 SLC25A34Q6PIV7 304 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 OR5D18Q8NGL1 313 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 SLC25A28Q96A46 364 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 ZNF385AQ96PM9 386 aaKnown RBP8.85□□□□□ -0.99
PTPRM-203ENST00000400060 TMEM147Q9BVK8 224 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 MAP1LC3CQ9BXW4 147 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 PARLQ9H300 379 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 CLCF1Q9UBD9 225 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 HSPB8Q9UJY1 196 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 TRAV8-7A0A075B6U6 113 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 LBX1P52954 281 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 GAS1P54826 345 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 CYP2G1PQ6ZSU1 146 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 CYTL1Q9NRR1 136 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 KLRF1Q9NZS2 232 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 COA3Q9Y2R0 106 aaPredicted RBP8.85□□□□□ -0.99
PTPRM-203ENST00000400060 J3QRE1 110 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 CST7O76096 145 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 GZMBP10144 247 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 TMEM97Q5BJF2 176 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 CST9Q5W186 159 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 MKXQ8IYA7 352 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 GVQW1Q8N7I0 195 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 RSG1Q9BU20 258 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 VN1R3Q9BXE9 311 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 TMEM106BQ9NUM4 274 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 A0A1W2PPC1 479 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 NKX6-3A6NJ46 265 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 HOXB2P14652 356 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 SLC37A1P57057 533 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 B4GALNT1Q00973 533 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 DLX2Q07687 328 aaPredicted RBP8.84□□□□□ -0.99
PTPRM-203ENST00000400060 SHHQ15465 462 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 ZNF684Q5T5D7 378 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.84□□□□□ -0.99
PTPRM-203ENST00000400060 TMEM251Q8N6I4 163 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 TRIB1Q96RU8 372 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 RARRES2Q99969 163 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 MSL2Q9HCI7 577 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 SDF2L1Q9HCN8 221 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 SPANXA1Q9NS26 97 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 ICAM5Q9UMF0 924 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 STRCP1A6NGW2 1772 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 DEGS1O15121 323 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 PIN1P1O15428 100 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 FAM157CP0CG43 387 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 PNLIPP16233 465 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 ZNF17P17021 662 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 MAS1LP35410 378 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 PPP1CCP36873 323 aaKnown RBP8.84□□□□□ -0.99
PTPRM-203ENST00000400060 PCBD1P61457 104 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 MEF2BQ02080 365 aaPredicted RBP8.84□□□□□ -0.99
PTPRM-203ENST00000400060 ZNRF4Q8WWF5 429 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 EDARADDQ8WWZ3 215 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 CNRIP1Q96F85 164 aaPredicted RBP8.84□□□□□ -0.99
PTPRM-203ENST00000400060 ARHGAP5-AS1Q96IT6 56 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 OR2A5Q96R48 311 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 LPAR4Q99677 370 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 PSMG3Q9BT73 122 aaPredicted RBP8.84□□□□□ -0.99
PTPRM-203ENST00000400060 PRDM13Q9H4Q3 707 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 IL21Q9HBE4 155 aa8.84□□□□□ -0.99
PTPRM-203ENST00000400060 MRPS17Q9Y2R5 130 aaKnown RBP8.84□□□□□ -0.99
PTPRM-203ENST00000400060 A0A1B0GU03 582 aa8.83□□□□□ -1
PTPRM-203ENST00000400060 IL33O95760 270 aa8.83□□□□□ -1
PTPRM-203ENST00000400060 FASLGP48023 281 aa8.83□□□□□ -1
PTPRM-203ENST00000400060 SLC38A11Q08AI6 406 aa8.83□□□□□ -1
PTPRM-203ENST00000400060 SNAI3Q3KNW1 292 aa8.83□□□□□ -1
PTPRM-203ENST00000400060 OR2I1PQ8NGU4 316 aa8.83□□□□□ -1
PTPRM-203ENST00000400060 OR10J5Q8NHC4 309 aa8.83□□□□□ -1
PTPRM-203ENST00000400060 APOBEC4Q8WW27 367 aaKnown RBP8.83□□□□□ -1
PTPRM-203ENST00000400060 SNHG12Q9BXW3 62 aa8.83□□□□□ -1
PTPRM-203ENST00000400060 OR6C3Q9NZP0 311 aa8.83□□□□□ -1
PTPRM-203ENST00000400060 TMED7-TICAM2A0A0A6YYA0 188 aa8.83□□□□□ -1
PTPRM-203ENST00000400060 HLA-DQA1P01909 254 aa8.83□□□□□ -1
PTPRM-203ENST00000400060 ZNF708P17019 499 aa8.83□□□□□ -1
PTPRM-203ENST00000400060 PSMB5P28074 263 aa8.83□□□□□ -1
PTPRM-203ENST00000400060 FMODQ06828 376 aa8.83□□□□□ -1
PTPRM-203ENST00000400060 WDR25Q64LD2 544 aaPredicted RBP8.83□□□□□ -1
PTPRM-203ENST00000400060 RNASEKQ6P5S7 137 aaKnown RBP8.83□□□□□ -1
PTPRM-203ENST00000400060 RTL10Q7L3V2 364 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms