RNA–Protein interactions for RNA: ENST00000398453.7

SMAGP-202, Transcript of small cell adhesion glycoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAGP, Length 1,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAGP-202ENST00000398453 FAM89BQ8N5H3 189 aa13.73□□□□□ -0.21
SMAGP-202ENST00000398453 YIPF5Q969M3 257 aa13.73□□□□□ -0.21
SMAGP-202ENST00000398453 SOSTQ9BQB4 213 aa13.73□□□□□ -0.21
SMAGP-202ENST00000398453 OR14J1Q9UGF5 321 aa13.73□□□□□ -0.21
SMAGP-202ENST00000398453 HELZ2Q9BYK8 2649 aaKnown RBP13.72□□□□□ -0.21
SMAGP-202ENST00000398453 USP9YO00507 2555 aaPredicted RBP13.72□□□□□ -0.21
SMAGP-202ENST00000398453 FAM90A10PA6NDY2 464 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 FAM90A18PA6NE21 464 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 FAM90A16PA6NEW6 464 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 FAM90A20PA6NIJ5 464 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 FAM90A8PA6NJQ4 464 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 FAM90A7PA6NKC0 464 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 FOXI3A8MTJ6 420 aaPredicted RBP13.72□□□□□ -0.21
SMAGP-202ENST00000398453 FAM90A22PA8MWA6 464 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 FAM90A12PA8MX19 464 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 FAM90A5PA8MXJ8 464 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 FAM90A23PA8MXZ1 464 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 TMEM178BH3BS89 294 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 J3QRK9 145 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 IFNL4K9M1U5 179 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 FAM90A15PP0C7V4 464 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 FAM90A13PP0C7W8 464 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 FAM90A14PP0C7W9 464 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 FAM90A24PP0C7X0 464 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 PTH2RP49190 550 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 CEBPDP49716 269 aaPredicted RBP13.72□□□□□ -0.21
SMAGP-202ENST00000398453 ZNF79Q15937 498 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 MPV17LQ2QL34 196 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 HFEQ30201 348 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 RNASE12Q5GAN4 147 aaKnown RBP13.72□□□□□ -0.21
SMAGP-202ENST00000398453 SPIN3Q5JUX0 258 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 ATAD3CQ5T2N8 411 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 PYHIN1Q6K0P9 492 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 IGFBPL1Q8WX77 278 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 RAB3CQ96E17 227 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 ARHGAP5-AS1Q96IT6 56 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 CYYR1Q96J86 154 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 NEDD4LQ96PU5 975 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 ZMAT3Q9HA38 289 aaKnown RBP13.72□□□□□ -0.21
SMAGP-202ENST00000398453 NLKQ9UBE8 527 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 WIPI2Q9Y4P8 454 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 LRBAP50851 2863 aa13.72□□□□□ -0.21
SMAGP-202ENST00000398453 OVOL3O00110 214 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 PDCD6O75340 191 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 HAND1O96004 215 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 KNG1P01042 644 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 TFF1P04155 84 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 PTHLHP12272 177 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 DAOP14920 347 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 ZNF44P15621 663 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 HIST1H1DP16402 221 aaKnown RBP13.71□□□□□ -0.21
SMAGP-202ENST00000398453 GNB3P16520 340 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 COL8A2P25067 703 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 CHATP28329 748 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 MNDAP41218 407 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 ZNF146Q15072 292 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 PLAC9Q5JTB6 97 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 ZNF787Q6DD87 383 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 SFRP4Q6FHJ7 346 aaPredicted RBP13.71□□□□□ -0.21
SMAGP-202ENST00000398453 SIGIRRQ6IA17 410 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 Q6ZTK2 550 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 FAM90A1Q86YD7 464 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 OR5T2Q8NGG2 359 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 NRGNQ92686 78 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 RDH5Q92781 318 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 GCDHQ92947 438 aaPredicted RBP13.71□□□□□ -0.21
SMAGP-202ENST00000398453 NUDT16L1Q9BRJ7 211 aaKnown RBP13.71□□□□□ -0.21
SMAGP-202ENST00000398453 PECRQ9BY49 303 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 SRRQ9GZT4 340 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 LIME1Q9H400 295 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 CXorf56Q9H5V9 222 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 GLS2Q9UI32 602 aa13.71□□□□□ -0.21
SMAGP-202ENST00000398453 TMEM235A6NFC5 223 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 OOEPA6NGQ2 149 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 RFPL4AA6NLU0 287 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 RFPL4AL1F8VTS6 287 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 SIRPB1O00241 398 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 SH2D1BO14796 132 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 DEGS1O15121 323 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 NDUFS7O75251 213 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 HLA-DQB1P01920 261 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 PTBP1P26599 531 aaKnown RBP eCLIP13.7□□□□□ -0.22
SMAGP-202ENST00000398453 TMEM50BP56557 158 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 PITPNAQ00169 270 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 ZNF260Q3ZCT1 412 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 CDNFQ49AH0 187 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 Q6P435 159 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 C6orf201Q7Z4U5 140 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 DEFB108BQ8NET1 73 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 POM121Q96HA1 1249 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 ABHD1Q96SE0 405 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 AUNIPQ9H7T9 357 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 DLL4Q9NR61 685 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 PLEKHJ1Q9NW61 149 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 RABL2AQ9UBK7 228 aaPredicted RBP13.7□□□□□ -0.22
SMAGP-202ENST00000398453 RABL2BQ9UNT1 228 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 DCHS2Q6V1P9 2916 aa13.7□□□□□ -0.22
SMAGP-202ENST00000398453 PPIAL4EA0A075B759 164 aa13.69□□□□□ -0.22
SMAGP-202ENST00000398453 OR2AT4A6NND4 320 aa13.69□□□□□ -0.22
SMAGP-202ENST00000398453 PPIAL4DF5H284 164 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms