RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 RAB27BO00194 218 aa19.81■□□□□ 0.76
TSPAN4-202ENST00000397396 SH2D1BO14796 132 aa19.81■□□□□ 0.76
TSPAN4-202ENST00000397396 GEMIN2O14893 280 aaKnown RBP19.81■□□□□ 0.76
TSPAN4-202ENST00000397396 OR7C1O76099 320 aaPredicted RBP19.81■□□□□ 0.76
TSPAN4-202ENST00000397396 FSTL3O95633 263 aa19.81■□□□□ 0.76
TSPAN4-202ENST00000397396 DAOP14920 347 aa19.81■□□□□ 0.76
TSPAN4-202ENST00000397396 IKZF1Q13422 519 aa19.81■□□□□ 0.76
TSPAN4-202ENST00000397396 IL18Q14116 193 aa19.81■□□□□ 0.76
TSPAN4-202ENST00000397396 ZNF846Q147U1 533 aa19.81■□□□□ 0.76
TSPAN4-202ENST00000397396 TEX36Q5VZQ5 186 aa19.81■□□□□ 0.76
TSPAN4-202ENST00000397396 BOLLQ8N9W6 283 aaKnown RBP19.81■□□□□ 0.76
TSPAN4-202ENST00000397396 CHST4Q8NCG5 386 aa19.81■□□□□ 0.76
TSPAN4-202ENST00000397396 RAB3CQ96E17 227 aa19.81■□□□□ 0.76
TSPAN4-202ENST00000397396 NICN1Q9BSH3 213 aa19.81■□□□□ 0.76
TSPAN4-202ENST00000397396 TANC2Q9HCD6 1990 aa19.8■□□□□ 0.76
TSPAN4-202ENST00000397396 PPIAL4EA0A075B759 164 aa19.8■□□□□ 0.76
TSPAN4-202ENST00000397396 OOEPA6NGQ2 149 aa19.8■□□□□ 0.76
TSPAN4-202ENST00000397396 PPIAL4DF5H284 164 aa19.8■□□□□ 0.76
TSPAN4-202ENST00000397396 LGALS8O00214 317 aa19.8■□□□□ 0.76
TSPAN4-202ENST00000397396 WNT9BO14905 357 aa19.8■□□□□ 0.76
TSPAN4-202ENST00000397396 PDCD6O75340 191 aa19.8■□□□□ 0.76
TSPAN4-202ENST00000397396 GLAP06280 429 aa19.8■□□□□ 0.76
TSPAN4-202ENST00000397396 PPIAL4FP0DN26 164 aa19.8■□□□□ 0.76
TSPAN4-202ENST00000397396 EGR1P18146 543 aa19.8■□□□□ 0.76
TSPAN4-202ENST00000397396 BLVRBP30043 206 aaPredicted RBP19.8■□□□□ 0.76
TSPAN4-202ENST00000397396 TAS2R20P59543 309 aa19.8■□□□□ 0.76
TSPAN4-202ENST00000397396 GMFBP60983 142 aa19.8■□□□□ 0.76
TSPAN4-202ENST00000397396 MRPS10P82664 201 aaKnown RBP19.8■□□□□ 0.76
TSPAN4-202ENST00000397396 WDR13Q9H1Z4 485 aa19.8■□□□□ 0.76
TSPAN4-202ENST00000397396 HSF4Q9ULV5 492 aa19.8■□□□□ 0.76
TSPAN4-202ENST00000397396 WIPI2Q9Y4P8 454 aa19.8■□□□□ 0.76
TSPAN4-202ENST00000397396 PPIAL4AQ9Y536 164 aa19.8■□□□□ 0.76
TSPAN4-202ENST00000397396 CHD3Q12873 2000 aaKnown RBP19.8■□□□□ 0.76
TSPAN4-202ENST00000397396 SNU13P55769 128 aaKnown RBP19.79■□□□□ 0.76
TSPAN4-202ENST00000397396 TIMD4Q96H15 378 aa19.79■□□□□ 0.76
TSPAN4-202ENST00000397396 CHODLQ9H9P2 273 aa19.79■□□□□ 0.76
TSPAN4-202ENST00000397396 TREM2Q9NZC2 230 aa19.79■□□□□ 0.76
TSPAN4-202ENST00000397396 V9GYH0 126 aa19.79■□□□□ 0.76
TSPAN4-202ENST00000397396 TRAV18A0A075B6X5 111 aa19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 A0A0A6YYD4 124 aa19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 OR2AT4A6NND4 320 aa19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 FOXI3A8MTJ6 420 aaPredicted RBP19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 SERPINE3A8MV23 424 aa19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 DEGS1O15121 323 aa19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 SOCS1O15524 211 aa19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 RP2O75695 350 aa19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 HAND1O96004 215 aa19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 GSTP1P09211 210 aaKnown RBP19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 ZNF44P15621 663 aa19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 HIST1H1DP16402 221 aaKnown RBP19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 FUT3P21217 361 aa19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 CD80P33681 288 aa19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 Q6ZTK2 550 aa19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 BIVMQ86UB2 503 aa19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 MFSD4AQ8N468 514 aa19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 SOSTQ9BQB4 213 aa19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 DNTTIP1Q9H147 329 aa19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 ZNF701Q9NV72 531 aaPredicted RBP19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 PLEKHJ1Q9NW61 149 aa19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 RCC2Q9P258 522 aaKnown RBP19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 MRPS7Q9Y2R9 242 aaKnown RBP19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 CACNG2Q9Y698 323 aa19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 DYSFO75923 2080 aa19.78■□□□□ 0.76
TSPAN4-202ENST00000397396 CTDSPLO15194 276 aa19.77■□□□□ 0.76
TSPAN4-202ENST00000397396 NDUFA2O43678 99 aa19.77■□□□□ 0.76
TSPAN4-202ENST00000397396 PAX1P15863 534 aa19.77■□□□□ 0.76
TSPAN4-202ENST00000397396 CHATP28329 748 aa19.77■□□□□ 0.76
TSPAN4-202ENST00000397396 TMEM33P57088 247 aa19.77■□□□□ 0.76
TSPAN4-202ENST00000397396 RBM39Q14498 530 aaKnown RBP19.77■□□□□ 0.76
TSPAN4-202ENST00000397396 PNLIPRP3Q17RR3 467 aa19.77■□□□□ 0.76
TSPAN4-202ENST00000397396 MOGAT2Q3SYC2 334 aa19.77■□□□□ 0.76
TSPAN4-202ENST00000397396 RAB1CQ92928 201 aa19.77■□□□□ 0.76
TSPAN4-202ENST00000397396 YIPF5Q969M3 257 aa19.77■□□□□ 0.76
TSPAN4-202ENST00000397396 IL36RNQ9UBH0 155 aa19.77■□□□□ 0.76
TSPAN4-202ENST00000397396 OR14J1Q9UGF5 321 aa19.77■□□□□ 0.76
TSPAN4-202ENST00000397396 NKX6-3A6NJ46 265 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 C3orf80F5H4A9 247 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 CA11O75493 328 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 INHBBP09529 407 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 CSF3P09919 207 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 PSG2P11465 335 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 CD40LGP29965 261 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 BTG1P62324 171 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 NKAPLQ5M9Q1 402 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 ATAD3CQ5T2N8 411 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 MUC20Q8N307 709 aaPredicted RBP19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 GDPD1Q8N9F7 314 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 PPP1R35Q8TAP8 253 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 RFPL4AA6NLU0 287 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 MCRIP1C9JLW8 97 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 RFPL4AL1F8VTS6 287 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 MFNGO00587 321 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 OR2H2O95918 312 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 COL8A2P25067 703 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 LMO1P25800 156 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 PRDX2P32119 198 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 KCNJ3P48549 501 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 PTH2RP49190 550 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms