RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 ZNF726A6NNF4 738 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 M0R135 149 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 DUX1O43812 170 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 CAMLGP49069 296 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 FOXL2NBQ6ZUU3 175 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 LRTM2Q8N967 370 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 ZNF799Q96GE5 643 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 OR51M1Q9H341 326 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 IGSF23A1L1A6 192 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 FAM24AA6NFZ4 105 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 ZNF850A8MQ14 1090 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 G3V3Y1 287 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 S100A8P05109 93 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 ZNF728P0DKX0 622 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 CRYGSP22914 178 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 MAS1LP35410 378 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 LIAT1Q6ZQX7 453 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 FGFBP3Q8TAT2 258 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 PP6455Q8WZ26 134 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 HS3ST6Q96QI5 342 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 FOXD3Q9UJU5 478 aaPredicted RBP12.06□□□□□ -0.48
NUP98-204ENST00000397004 ZFHX4Q86UP3 3567 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 TMEM265A0A087WTH1 108 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 LOC102725191A0A1B0GVB3 256 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 ZNF724A8MTY0 619 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 GPR137BO60478 399 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 S100A6P06703 90 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 CXCL1P09341 107 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 GLB1P16278 677 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 STARD6P59095 220 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 SHBQ15464 509 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 C10orf128Q5T292 105 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 CD300LFQ8TDQ1 290 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 MALSU1Q96EH3 234 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 BOD1Q96IK1 185 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 OR6C1Q96RD1 312 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 SLC35B3Q9H1N7 401 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 GLRX2Q9NS18 164 aa12.06□□□□□ -0.48
NUP98-204ENST00000397004 SUCLG1P53597 346 aaKnown RBP12.05□□□□□ -0.48
NUP98-204ENST00000397004 CPEB2Q7Z5Q1 589 aaKnown RBP12.05□□□□□ -0.48
NUP98-204ENST00000397004 MR1Q95460 341 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 RBM24Q9BX46 236 aaKnown RBP12.05□□□□□ -0.48
NUP98-204ENST00000397004 MMP24Q9Y5R2 645 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 NCKAP5O14513 1909 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 PROB1E7EW31 1015 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 ONECUT2O95948 504 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 PYY3Q5JQD4 70 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 SLC22A25Q6T423 547 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 SUMF1Q8NBK3 374 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 GJC3Q8NFK1 279 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 FAM213BQ8TBF2 198 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 MUCL1Q96DR8 90 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 P4HTMQ9NXG6 502 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 PUS1Q9Y606 427 aaKnown RBP eCLIP12.05□□□□□ -0.48
NUP98-204ENST00000397004 NSG1A0A0A6YYJ2 146 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 NKX2-6A6NCS4 301 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 C3orf80F5H4A9 247 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 IFNA21P01568 189 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 HTR5AP47898 357 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 EWSR1Q01844 656 aaKnown RBP eCLIP12.05□□□□□ -0.48
NUP98-204ENST00000397004 CLINT1Q14677 625 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 MSX1P28360 303 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 ZNF133P52736 654 aaPredicted RBP12.05□□□□□ -0.48
NUP98-204ENST00000397004 SLC22A8Q8TCC7 542 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 TCEAL3Q969E4 200 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 GGACTQ9BVM4 153 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 PLEK2Q9NYT0 353 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 CRIM1Q9NZV1 1036 aa12.05□□□□□ -0.48
NUP98-204ENST00000397004 H0YL77 283 aa12.04□□□□□ -0.48
NUP98-204ENST00000397004 SLC33A1O00400 549 aaPredicted RBP12.04□□□□□ -0.48
NUP98-204ENST00000397004 ZIC3O60481 467 aa12.04□□□□□ -0.48
NUP98-204ENST00000397004 AADACP22760 399 aa12.04□□□□□ -0.48
NUP98-204ENST00000397004 ERVFRD-1P60508 538 aa12.04□□□□□ -0.48
NUP98-204ENST00000397004 ZNF774Q6NX45 483 aa12.04□□□□□ -0.48
NUP98-204ENST00000397004 FBXL14Q8N1E6 418 aa12.04□□□□□ -0.48
NUP98-204ENST00000397004 KDF1Q8NAX2 398 aaPredicted RBP12.04□□□□□ -0.48
NUP98-204ENST00000397004 SPACA9Q96E40 222 aaPredicted RBP12.04□□□□□ -0.48
NUP98-204ENST00000397004 AP4M1O00189 453 aa12.04□□□□□ -0.48
NUP98-204ENST00000397004 CXorf66Q5JRM2 361 aaPredicted RBP12.04□□□□□ -0.48
NUP98-204ENST00000397004 GFI1BQ5VTD9 330 aa12.04□□□□□ -0.48
NUP98-204ENST00000397004 SRXN1Q9BYN0 137 aa12.04□□□□□ -0.48
NUP98-204ENST00000397004 NECAP2Q9NVZ3 263 aa12.04□□□□□ -0.48
NUP98-204ENST00000397004 LUZP4Q9P127 313 aa12.04□□□□□ -0.48
NUP98-204ENST00000397004 HS3ST3B1Q9Y662 390 aa12.04□□□□□ -0.48
NUP98-204ENST00000397004 KIAA1549Q9HCM3 1950 aa12.04□□□□□ -0.48
NUP98-204ENST00000397004 ZNF587BE7ETH6 402 aa12.04□□□□□ -0.48
NUP98-204ENST00000397004 HSD17B6O14756 317 aa12.04□□□□□ -0.48
NUP98-204ENST00000397004 OMGP23515 440 aa12.04□□□□□ -0.48
NUP98-204ENST00000397004 ATP6V0CP27449 155 aa12.04□□□□□ -0.48
NUP98-204ENST00000397004 WDR74Q6RFH5 385 aaPredicted RBP12.04□□□□□ -0.48
NUP98-204ENST00000397004 ASCL4Q6XD76 172 aa12.04□□□□□ -0.48
NUP98-204ENST00000397004 CALHM1Q8IU99 346 aa12.04□□□□□ -0.48
NUP98-204ENST00000397004 ZFP62Q8NB50 900 aaPredicted RBP12.04□□□□□ -0.48
NUP98-204ENST00000397004 A0A1W2PQM1 296 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 PHF1O43189 567 aaPredicted RBP12.03□□□□□ -0.48
NUP98-204ENST00000397004 SYNGR3O43761 229 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 PRH1P02810 166 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 GNRHRP30968 328 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 RND3P61587 244 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms