RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 CCL17Q92583 94 aa20.41■□□□□ 0.86
LRFN4-202ENST00000393952 RAB3CQ96E17 227 aa20.41■□□□□ 0.86
LRFN4-202ENST00000393952 C14orf79Q96F83 325 aa20.41■□□□□ 0.86
LRFN4-202ENST00000393952 ARHGAP5-AS1Q96IT6 56 aa20.41■□□□□ 0.86
LRFN4-202ENST00000393952 SRRQ9GZT4 340 aa20.41■□□□□ 0.86
LRFN4-202ENST00000393952 RASL12Q9NYN1 266 aa20.41■□□□□ 0.86
LRFN4-202ENST00000393952 USF3Q68DE3 2245 aa20.41■□□□□ 0.86
LRFN4-202ENST00000393952 FAM90A10PA6NDY2 464 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 FAM90A18PA6NE21 464 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 FAM90A16PA6NEW6 464 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 FAM90A20PA6NIJ5 464 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 FAM90A8PA6NJQ4 464 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 FAM90A7PA6NKC0 464 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 LRRC30A6NM36 301 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 FAM90A22PA8MWA6 464 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 FAM90A12PA8MX19 464 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 FAM90A5PA8MXJ8 464 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 FAM90A23PA8MXZ1 464 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 FAM90A15PP0C7V4 464 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 FAM90A13PP0C7W8 464 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 FAM90A14PP0C7W9 464 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 FAM90A24PP0C7X0 464 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 IKZF1Q13422 519 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 ZNF181Q2M3W8 571 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 NKAPLQ5M9Q1 402 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 NEU4Q8WWR8 484 aaPredicted RBP20.4■□□□□ 0.86
LRFN4-202ENST00000393952 IGFBPL1Q8WX77 278 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 GCDHQ92947 438 aaPredicted RBP20.4■□□□□ 0.86
LRFN4-202ENST00000393952 POM121Q96HA1 1249 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 SDHCQ99643 169 aaPredicted RBP20.4■□□□□ 0.86
LRFN4-202ENST00000393952 NUDT16L1Q9BRJ7 211 aaKnown RBP20.4■□□□□ 0.86
LRFN4-202ENST00000393952 TMEM106BQ9NUM4 274 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 NPTNQ9Y639 398 aa20.4■□□□□ 0.86
LRFN4-202ENST00000393952 IGHV3OR15-7A0A075B7D8 119 aa20.39■□□□□ 0.85
LRFN4-202ENST00000393952 LYNX1G3V0Z9 82 aa20.39■□□□□ 0.85
LRFN4-202ENST00000393952 LY6HO94772 140 aa20.39■□□□□ 0.85
LRFN4-202ENST00000393952 ZNF205O95201 554 aa20.39■□□□□ 0.85
LRFN4-202ENST00000393952 LYNX1P0DP58 116 aa20.39■□□□□ 0.85
LRFN4-202ENST00000393952 GNB3P16520 340 aa20.39■□□□□ 0.85
LRFN4-202ENST00000393952 PPP5CP53041 499 aa20.39■□□□□ 0.85
LRFN4-202ENST00000393952 SCN1BQ07699 218 aa20.39■□□□□ 0.85
LRFN4-202ENST00000393952 ZNF146Q15072 292 aa20.39■□□□□ 0.85
LRFN4-202ENST00000393952 MPV17LQ2QL34 196 aa20.39■□□□□ 0.85
LRFN4-202ENST00000393952 ZNF260Q3ZCT1 412 aa20.39■□□□□ 0.85
LRFN4-202ENST00000393952 CDNFQ49AH0 187 aa20.39■□□□□ 0.85
LRFN4-202ENST00000393952 FIP1L1Q6UN15 594 aaKnown RBP20.39■□□□□ 0.85
LRFN4-202ENST00000393952 AUNIPQ9H7T9 357 aa20.39■□□□□ 0.85
LRFN4-202ENST00000393952 OR14J1Q9UGF5 321 aa20.39■□□□□ 0.85
LRFN4-202ENST00000393952 ELF5Q9UKW6 265 aaPredicted RBP20.39■□□□□ 0.85
LRFN4-202ENST00000393952 OVOL3O00110 214 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 KNG1P01042 644 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 HIST1H1DP16402 221 aaKnown RBP20.38■□□□□ 0.85
LRFN4-202ENST00000393952 COL8A2P25067 703 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 CHATP28329 748 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 CEBPDP49716 269 aaPredicted RBP20.38■□□□□ 0.85
LRFN4-202ENST00000393952 SPIN3Q5JUX0 258 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 OLFML2AQ68BL7 652 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 HIST2H2BCQ6DN03 193 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 SFRP4Q6FHJ7 346 aaPredicted RBP20.38■□□□□ 0.85
LRFN4-202ENST00000393952 Q6P435 159 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 Q6ZTK2 550 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 C6orf201Q7Z4U5 140 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 LINC00596Q86U02 117 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 YIPF5Q969M3 257 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 PECRQ9BY49 303 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 RABL2AQ9UBK7 228 aaPredicted RBP20.38■□□□□ 0.85
LRFN4-202ENST00000393952 DNAJB11Q9UBS4 358 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 RABL2BQ9UNT1 228 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 FASNP49327 2511 aaKnown RBP20.38■□□□□ 0.85
LRFN4-202ENST00000393952 TMEM235A6NFC5 223 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 TMEM178BH3BS89 294 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 TFF1P04155 84 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 CD40LGP29965 261 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 PITPNAQ00169 270 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 RNASE12Q5GAN4 147 aaKnown RBP20.38■□□□□ 0.85
LRFN4-202ENST00000393952 ATAD3CQ5T2N8 411 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 OR5T2Q8NGG2 359 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 NEDD4LQ96PU5 975 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 CCL19Q99731 98 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 NLKQ9UBE8 527 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 KCNK7Q9Y2U2 307 aa20.38■□□□□ 0.85
LRFN4-202ENST00000393952 IFNL4K9M1U5 179 aa20.37■□□□□ 0.85
LRFN4-202ENST00000393952 MFNGO00587 321 aa20.37■□□□□ 0.85
LRFN4-202ENST00000393952 PDCD6O75340 191 aa20.37■□□□□ 0.85
LRFN4-202ENST00000393952 TPPPO94811 219 aa20.37■□□□□ 0.85
LRFN4-202ENST00000393952 HAND1O96004 215 aa20.37■□□□□ 0.85
LRFN4-202ENST00000393952 FUT3P21217 361 aa20.37■□□□□ 0.85
LRFN4-202ENST00000393952 HFEQ30201 348 aa20.37■□□□□ 0.85
LRFN4-202ENST00000393952 BRICD5Q6PL45 260 aa20.37■□□□□ 0.85
LRFN4-202ENST00000393952 FAM90A1Q86YD7 464 aa20.37■□□□□ 0.85
LRFN4-202ENST00000393952 C1orf87Q8N0U7 546 aa20.37■□□□□ 0.85
LRFN4-202ENST00000393952 LIME1Q9H400 295 aa20.37■□□□□ 0.85
LRFN4-202ENST00000393952 PLEKHJ1Q9NW61 149 aa20.37■□□□□ 0.85
LRFN4-202ENST00000393952 WIPI2Q9Y4P8 454 aa20.37■□□□□ 0.85
LRFN4-202ENST00000393952 RFPL4AA6NLU0 287 aa20.36■□□□□ 0.85
LRFN4-202ENST00000393952 RFPL4AL1F8VTS6 287 aa20.36■□□□□ 0.85
LRFN4-202ENST00000393952 NDUFS7O75251 213 aa20.36■□□□□ 0.85
LRFN4-202ENST00000393952 PSG2P11465 335 aa20.36■□□□□ 0.85
LRFN4-202ENST00000393952 ZNF44P15621 663 aa20.36■□□□□ 0.85
LRFN4-202ENST00000393952 DGCR2P98153 550 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms