RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 C5orf51A6NDU8 294 aa19.86■□□□□ 0.77
VPS16-201ENST00000380443 LEUTXA8MZ59 168 aa19.86■□□□□ 0.77
VPS16-201ENST00000380443 CCSO14618 274 aa19.86■□□□□ 0.77
VPS16-201ENST00000380443 NGFP01138 241 aa19.86■□□□□ 0.77
VPS16-201ENST00000380443 WT1P19544 449 aaPredicted RBP19.86■□□□□ 0.77
VPS16-201ENST00000380443 SUPT4H1P63272 117 aaKnown RBP19.86■□□□□ 0.77
VPS16-201ENST00000380443 SRSF6Q13247 344 aaKnown RBP19.86■□□□□ 0.77
VPS16-201ENST00000380443 OR2A2Q6IF42 318 aa19.86■□□□□ 0.77
VPS16-201ENST00000380443 ZNF573Q86YE8 665 aa19.86■□□□□ 0.77
VPS16-201ENST00000380443 OR5P3Q8WZ94 311 aa19.86■□□□□ 0.77
VPS16-201ENST00000380443 MARVELD3Q96A59 401 aa19.86■□□□□ 0.77
VPS16-201ENST00000380443 SEC22AQ96IW7 307 aa19.86■□□□□ 0.77
VPS16-201ENST00000380443 HDHD3Q9BSH5 251 aaPredicted RBP19.86■□□□□ 0.77
VPS16-201ENST00000380443 FAM25EA8MYX2 175 aa19.86■□□□□ 0.77
VPS16-201ENST00000380443 ZNF732B4DXR9 585 aa19.86■□□□□ 0.77
VPS16-201ENST00000380443 CRHP06850 196 aa19.86■□□□□ 0.77
VPS16-201ENST00000380443 GLRA1P23415 457 aa19.86■□□□□ 0.77
VPS16-201ENST00000380443 PSMB6P28072 239 aa19.86■□□□□ 0.77
VPS16-201ENST00000380443 SERPINF1P36955 418 aa19.86■□□□□ 0.77
VPS16-201ENST00000380443 WNT5AP41221 380 aa19.86■□□□□ 0.77
VPS16-201ENST00000380443 HAAOP46952 286 aa19.86■□□□□ 0.77
VPS16-201ENST00000380443 UBE2NP61088 152 aaKnown RBP19.86■□□□□ 0.77
VPS16-201ENST00000380443 INO80CQ6PI98 192 aaPredicted RBP19.86■□□□□ 0.77
VPS16-201ENST00000380443 VRK1Q99986 396 aaPredicted RBP19.86■□□□□ 0.77
VPS16-201ENST00000380443 PLSCR2Q9NRY7 297 aa19.86■□□□□ 0.77
VPS16-201ENST00000380443 TRAPPC2LH3BP13 241 aa19.85■□□□□ 0.77
VPS16-201ENST00000380443 RPS2P15880 293 aaKnown RBP19.85■□□□□ 0.77
VPS16-201ENST00000380443 GPM6AP51674 278 aa19.85■□□□□ 0.77
VPS16-201ENST00000380443 UBA52P62987 128 aaKnown RBP19.85■□□□□ 0.77
VPS16-201ENST00000380443 DEFB109BQ30KR1 87 aa19.85■□□□□ 0.77
VPS16-201ENST00000380443 FBXW12Q6X9E4 464 aa19.85■□□□□ 0.77
VPS16-201ENST00000380443 Q6ZT83 130 aa19.85■□□□□ 0.77
VPS16-201ENST00000380443 SGPP2Q8IWX5 399 aa19.85■□□□□ 0.77
VPS16-201ENST00000380443 ZNF442Q9H7R0 627 aa19.85■□□□□ 0.77
VPS16-201ENST00000380443 SPACA1Q9HBV2 294 aa19.85■□□□□ 0.77
VPS16-201ENST00000380443 CHMP1AQ9HD42 196 aaPredicted RBP19.85■□□□□ 0.77
VPS16-201ENST00000380443 LHX6Q9UPM6 363 aa19.85■□□□□ 0.77
VPS16-201ENST00000380443 FREM2Q5SZK8 3169 aa19.85■□□□□ 0.77
VPS16-201ENST00000380443 IFNA2P01563 188 aa19.84■□□□□ 0.77
VPS16-201ENST00000380443 EIF2S3P41091 472 aaKnown RBP19.84■□□□□ 0.77
VPS16-201ENST00000380443 AP2S1P53680 142 aaPredicted RBP19.84■□□□□ 0.77
VPS16-201ENST00000380443 UCP3P55916 312 aa19.84■□□□□ 0.77
VPS16-201ENST00000380443 GNG3P63215 75 aa19.84■□□□□ 0.77
VPS16-201ENST00000380443 ZADH2Q8N4Q0 377 aa19.84■□□□□ 0.77
VPS16-201ENST00000380443 C1orf162Q8NEQ5 155 aaPredicted RBP19.84■□□□□ 0.77
VPS16-201ENST00000380443 ZCCHC14Q8WYQ9 949 aaKnown RBP19.84■□□□□ 0.77
VPS16-201ENST00000380443 PIK3IP1Q96FE7 263 aa19.84■□□□□ 0.77
VPS16-201ENST00000380443 CYYR1Q96J86 154 aa19.84■□□□□ 0.77
VPS16-201ENST00000380443 CITED4Q96RK1 184 aa19.84■□□□□ 0.77
VPS16-201ENST00000380443 TRIB1Q96RU8 372 aa19.84■□□□□ 0.77
VPS16-201ENST00000380443 PKIBQ9C010 78 aa19.84■□□□□ 0.77
VPS16-201ENST00000380443 MED9Q9NWA0 146 aa19.84■□□□□ 0.77
VPS16-201ENST00000380443 C1orf123Q9NWV4 160 aa19.84■□□□□ 0.77
VPS16-201ENST00000380443 TRBV6-7A0A0A0MS04 114 aa19.83■□□□□ 0.77
VPS16-201ENST00000380443 AHRRA9YTQ3 701 aa19.83■□□□□ 0.77
VPS16-201ENST00000380443 OR7C1O76099 320 aaPredicted RBP19.83■□□□□ 0.77
VPS16-201ENST00000380443 GLAP06280 429 aa19.83■□□□□ 0.77
VPS16-201ENST00000380443 ZNF14P17017 642 aaPredicted RBP19.83■□□□□ 0.77
VPS16-201ENST00000380443 INO80EQ8NBZ0 244 aaPredicted RBP19.83■□□□□ 0.77
VPS16-201ENST00000380443 GTF3AQ92664 365 aaKnown RBP19.83■□□□□ 0.77
VPS16-201ENST00000380443 RCC2Q9P258 522 aaKnown RBP19.83■□□□□ 0.77
VPS16-201ENST00000380443 KCNMB2Q9Y691 235 aa19.83■□□□□ 0.77
VPS16-201ENST00000380443 FRYQ5TBA9 3013 aa19.83■□□□□ 0.76
VPS16-201ENST00000380443 KANTRA0A1W2PQU2 76 aa19.83■□□□□ 0.76
VPS16-201ENST00000380443 EEF1E1-BLOC1S5C9J1V9 151 aa19.83■□□□□ 0.76
VPS16-201ENST00000380443 MSTNO14793 375 aa19.83■□□□□ 0.76
VPS16-201ENST00000380443 BCL3P20749 454 aa19.83■□□□□ 0.76
VPS16-201ENST00000380443 NPBWR2P48146 333 aa19.83■□□□□ 0.76
VPS16-201ENST00000380443 BAMBIQ13145 260 aa19.83■□□□□ 0.76
VPS16-201ENST00000380443 SLC9A3R2Q15599 337 aa19.83■□□□□ 0.76
VPS16-201ENST00000380443 IGFL3Q6UXB1 125 aa19.83■□□□□ 0.76
VPS16-201ENST00000380443 KDF1Q8NAX2 398 aaPredicted RBP19.83■□□□□ 0.76
VPS16-201ENST00000380443 FGF23Q9GZV9 251 aaPredicted RBP19.83■□□□□ 0.76
VPS16-201ENST00000380443 RIMS4Q9H426 269 aaPredicted RBP19.83■□□□□ 0.76
VPS16-201ENST00000380443 MEMO1Q9Y316 297 aa19.83■□□□□ 0.76
VPS16-201ENST00000380443 C13orf42A0A1B0GVH6 325 aa19.82■□□□□ 0.76
VPS16-201ENST00000380443 IGHV1-2P23083 117 aa19.82■□□□□ 0.76
VPS16-201ENST00000380443 OPRM1P35372 400 aa19.82■□□□□ 0.76
VPS16-201ENST00000380443 RBMXP38159 391 aaKnown RBP19.82■□□□□ 0.76
VPS16-201ENST00000380443 GLP1RP43220 463 aa19.82■□□□□ 0.76
VPS16-201ENST00000380443 IL24Q13007 206 aa19.82■□□□□ 0.76
VPS16-201ENST00000380443 SLAMF9Q96A28 289 aa19.82■□□□□ 0.76
VPS16-201ENST00000380443 C2orf50Q96LR7 162 aa19.82■□□□□ 0.76
VPS16-201ENST00000380443 CDH20Q9HBT6 801 aa19.82■□□□□ 0.76
VPS16-201ENST00000380443 KCNIP3Q9Y2W7 256 aa19.82■□□□□ 0.76
VPS16-201ENST00000380443 CRYM-AS1A6NIL9 109 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 BCL2L11O43521 198 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 IL13RA2Q14627 380 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 GABRA6Q16445 453 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 ANKRD55Q3KP44 614 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 SNIP1Q8TAD8 396 aaKnown RBP19.81■□□□□ 0.76
VPS16-201ENST00000380443 POM121CA8CG34 1229 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 PET100P0DJ07 73 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 ZNF728P0DKX0 622 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 RRASP10301 218 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 LYL1P12980 280 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 SELEP16581 610 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 PI3P19957 117 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 TUBG1P23258 451 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 SLC22A25Q6T423 547 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms