RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 SLC17A2O00624 439 aa13.6□□□□□ -0.23
TMEM53-203ENST00000372242 SLC22A1O15245 554 aa13.6□□□□□ -0.23
TMEM53-203ENST00000372242 PHF1O43189 567 aaPredicted RBP13.6□□□□□ -0.23
TMEM53-203ENST00000372242 FCN3O75636 299 aa13.6□□□□□ -0.23
TMEM53-203ENST00000372242 CSTBP04080 98 aaKnown RBP13.6□□□□□ -0.23
TMEM53-203ENST00000372242 HEXAP06865 529 aa13.6□□□□□ -0.23
TMEM53-203ENST00000372242 VBP1P61758 197 aa13.6□□□□□ -0.23
TMEM53-203ENST00000372242 IKZF1Q13422 519 aa13.6□□□□□ -0.23
TMEM53-203ENST00000372242 PIGYQ3MUY2 71 aa13.6□□□□□ -0.23
TMEM53-203ENST00000372242 ATPAF1Q5TC12 328 aaPredicted RBP13.6□□□□□ -0.23
TMEM53-203ENST00000372242 ELP2Q6IA86 826 aa13.6□□□□□ -0.23
TMEM53-203ENST00000372242 FAM166AQ6J272 317 aa13.6□□□□□ -0.23
TMEM53-203ENST00000372242 ZNF788Q6ZQV5 615 aa13.6□□□□□ -0.23
TMEM53-203ENST00000372242 ANKRD13BQ86YJ7 626 aa13.6□□□□□ -0.23
TMEM53-203ENST00000372242 ZNRF1Q8ND25 227 aa13.6□□□□□ -0.23
TMEM53-203ENST00000372242 OR6M1Q8NGM8 313 aa13.6□□□□□ -0.23
TMEM53-203ENST00000372242 TBC1D15Q8TC07 691 aa13.6□□□□□ -0.23
TMEM53-203ENST00000372242 FAM46BQ96A09 425 aa13.6□□□□□ -0.23
TMEM53-203ENST00000372242 NEIL1Q96FI4 390 aaPredicted RBP13.6□□□□□ -0.23
TMEM53-203ENST00000372242 GAFA1Q96PS6 74 aa13.6□□□□□ -0.23
TMEM53-203ENST00000372242 SMR3AQ99954 134 aa13.6□□□□□ -0.23
TMEM53-203ENST00000372242 IL36GQ9NZH8 169 aa13.6□□□□□ -0.23
TMEM53-203ENST00000372242 A0A0G2JK05 382 aa13.59□□□□□ -0.23
TMEM53-203ENST00000372242 INHBBP09529 407 aa13.59□□□□□ -0.23
TMEM53-203ENST00000372242 IGHV4-31P0DP07 118 aa13.59□□□□□ -0.23
TMEM53-203ENST00000372242 PITPNBP48739 271 aa13.59□□□□□ -0.23
TMEM53-203ENST00000372242 PSMD7P51665 324 aa13.59□□□□□ -0.23
TMEM53-203ENST00000372242 FGF12P61328 243 aa13.59□□□□□ -0.23
TMEM53-203ENST00000372242 DGUOKQ16854 277 aa13.59□□□□□ -0.23
TMEM53-203ENST00000372242 OR10K2Q6IF99 312 aa13.59□□□□□ -0.23
TMEM53-203ENST00000372242 METAP1DQ6UB28 335 aaPredicted RBP13.59□□□□□ -0.23
TMEM53-203ENST00000372242 ZNF841Q6ZN19 808 aa13.59□□□□□ -0.23
TMEM53-203ENST00000372242 NLRC3Q7RTR2 1065 aa13.59□□□□□ -0.23
TMEM53-203ENST00000372242 TPRA1Q86W33 373 aa13.59□□□□□ -0.23
TMEM53-203ENST00000372242 TMEM104Q8NE00 496 aa13.59□□□□□ -0.23
TMEM53-203ENST00000372242 OR8B3Q8NGG8 313 aa13.59□□□□□ -0.23
TMEM53-203ENST00000372242 SLC25A28Q96A46 364 aa13.59□□□□□ -0.23
TMEM53-203ENST00000372242 OR8B2Q96RD0 313 aa13.59□□□□□ -0.23
TMEM53-203ENST00000372242 BANF2Q9H503 90 aa13.59□□□□□ -0.23
TMEM53-203ENST00000372242 RHOFQ9HBH0 211 aa13.59□□□□□ -0.23
TMEM53-203ENST00000372242 KAAG1Q9UBP8 84 aa13.59□□□□□ -0.23
TMEM53-203ENST00000372242 MAB21L2Q9Y586 359 aa13.59□□□□□ -0.23
TMEM53-203ENST00000372242 NKX6-3A6NJ46 265 aa13.58□□□□□ -0.24
TMEM53-203ENST00000372242 IFITM5A6NNB3 132 aa13.58□□□□□ -0.24
TMEM53-203ENST00000372242 DVL1O14640 695 aa13.58□□□□□ -0.24
TMEM53-203ENST00000372242 GABARAPO95166 117 aa13.58□□□□□ -0.24
TMEM53-203ENST00000372242 SLC2A2P11168 524 aaPredicted RBP13.58□□□□□ -0.24
TMEM53-203ENST00000372242 ZFP36P26651 326 aaKnown RBP13.58□□□□□ -0.24
TMEM53-203ENST00000372242 IL13RA1P78552 427 aa13.58□□□□□ -0.24
TMEM53-203ENST00000372242 LCN2P80188 198 aa13.58□□□□□ -0.24
TMEM53-203ENST00000372242 SCN1BQ07699 218 aa13.58□□□□□ -0.24
TMEM53-203ENST00000372242 ZNF146Q15072 292 aa13.58□□□□□ -0.24
TMEM53-203ENST00000372242 RAB11BQ15907 218 aa13.58□□□□□ -0.24
TMEM53-203ENST00000372242 CTF1Q16619 201 aa13.58□□□□□ -0.24
TMEM53-203ENST00000372242 FIP1L1Q6UN15 594 aaKnown RBP13.58□□□□□ -0.24
TMEM53-203ENST00000372242 SLC36A1Q7Z2H8 476 aa13.58□□□□□ -0.24
TMEM53-203ENST00000372242 CLVS1Q8IUQ0 354 aaPredicted RBP13.58□□□□□ -0.24
TMEM53-203ENST00000372242 OSR2Q8N2R0 312 aa13.58□□□□□ -0.24
TMEM53-203ENST00000372242 Q8NFD4 153 aa13.58□□□□□ -0.24
TMEM53-203ENST00000372242 OR51D1Q8NGF3 324 aa13.58□□□□□ -0.24
TMEM53-203ENST00000372242 MSI2Q96DH6 328 aaKnown RBP13.58□□□□□ -0.24
TMEM53-203ENST00000372242 ZNF581Q9P0T4 197 aa13.58□□□□□ -0.24
TMEM53-203ENST00000372242 CEPT1Q9Y6K0 416 aa13.58□□□□□ -0.24
TMEM53-203ENST00000372242 A0A0B4J203 849 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 SIGLEC5O15389 551 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 ZNF780AO75290 641 aaPredicted RBP13.57□□□□□ -0.24
TMEM53-203ENST00000372242 CRTAPO75718 401 aaPredicted RBP13.57□□□□□ -0.24
TMEM53-203ENST00000372242 HAND1O96004 215 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 VSIG8P0DPA2 414 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 GTF2F2P13984 249 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 COL10A1Q03692 680 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 ESCO2Q56NI9 601 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 SPIN3Q5JUX0 258 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 SDSLQ96GA7 329 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 DNTTIP1Q9H147 329 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 CLN8Q9UBY8 286 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 ST3GAL6Q9Y274 331 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 ARHGAP32A7KAX9 2087 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 NOTOA8MTQ0 251 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 ARSBP15848 533 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 RPS19P39019 145 aaKnown RBP13.57□□□□□ -0.24
TMEM53-203ENST00000372242 GNB2P62879 340 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 GPR176Q14439 515 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 WDR25Q64LD2 544 aaPredicted RBP13.57□□□□□ -0.24
TMEM53-203ENST00000372242 ASCC1Q8N9N2 400 aaKnown RBP13.57□□□□□ -0.24
TMEM53-203ENST00000372242 TMEM185AQ8NFB2 350 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 OR51T1Q8NGJ9 327 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 MED30Q96HR3 178 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 SSBP3Q9BWW4 388 aaPredicted RBP13.57□□□□□ -0.24
TMEM53-203ENST00000372242 STEAP1Q9UHE8 339 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 DAPK2Q9UIK4 370 aa13.57□□□□□ -0.24
TMEM53-203ENST00000372242 AIPO00170 330 aa13.56□□□□□ -0.24
TMEM53-203ENST00000372242 SIRPB1O00241 398 aa13.56□□□□□ -0.24
TMEM53-203ENST00000372242 SH2D1BO14796 132 aa13.56□□□□□ -0.24
TMEM53-203ENST00000372242 GEMIN2O14893 280 aaKnown RBP13.56□□□□□ -0.24
TMEM53-203ENST00000372242 NDUFB3O43676 98 aa13.56□□□□□ -0.24
TMEM53-203ENST00000372242 OR2H2O95918 312 aa13.56□□□□□ -0.24
TMEM53-203ENST00000372242 MGMTP16455 207 aa13.56□□□□□ -0.24
TMEM53-203ENST00000372242 BMXP51813 675 aa13.56□□□□□ -0.24
TMEM53-203ENST00000372242 RBM11P57052 281 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms