RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 EFSO43281 561 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 NDUFB6O95139 128 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 CA2P00918 260 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 RPEL1Q2QD12 228 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 TMEM251Q8N6I4 163 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 OR52L2PQ8NGH6 319 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 SOX7Q9BT81 388 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 PBOV1Q9GZY1 135 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 FAM181BA6NEQ2 426 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 UBE2G1P62253 170 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 NCR3LG1Q68D85 454 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 LSRQ86X29 649 aaPredicted RBP11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 SMIM7Q9BQ49 75 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 RSPO3Q9BXY4 272 aaPredicted RBP11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 FAM24AA6NFZ4 105 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 GSG1Q2KHT4 349 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 SPANXN5Q5MJ07 72 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 SPINK14Q6IE38 97 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 TEX29Q8N6K0 151 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 OR8D4Q8NGM9 314 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 OR1J1Q8NGS3 322 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 SIGLEC11Q96RL6 698 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 CRXO43186 299 aaPredicted RBP11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 OR5G3P0C626 314 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 SP9P0CG40 484 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 UCNP55089 124 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 SOX8P57073 446 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 POLR2GP62487 172 aaKnown RBP eCLIP11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 FZD5Q13467 585 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 ALKBH6Q3KRA9 238 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 SELENOHQ8IZQ5 122 aaKnown RBP11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 RPUSD4Q96CM3 377 aaKnown RBP11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 SLC22A13Q9Y226 551 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 ISLRO14498 428 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 PI3P19957 117 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 CSF2RBP32927 897 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 GSK3AP49840 483 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 FBXO17Q96EF6 278 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 AKR1E2Q96JD6 320 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 SLC26A1Q9H2B4 701 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 COL11A1P12107 1806 aaPredicted RBP11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 SIRPB1O00241 398 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 SRD5A2P31213 254 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 UBE3DQ7Z6J8 389 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 BPIFA4PQ86YQ2 179 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 OR10P1Q8NGE3 313 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 GPX7Q96SL4 187 aaPredicted RBP11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 SLCO1C1Q9NYB5 712 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 PCOLCE2Q9UKZ9 415 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 A4GNTQ9UNA3 340 aa11.87□□□□□ -0.51
RAPGEF1-201ENST00000372189 TMEM128Q5BJH2 165 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 FAM209AQ5JX71 171 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 ERASQ7Z444 233 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 ARHGEF39Q8N4T4 335 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 B9D1Q9UPM9 204 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 NUP205Q92621 2012 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 DVL1O14640 695 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 F2RP25116 425 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 CDAP32320 146 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 GABRA4P48169 554 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 DVL1P1P54792 670 aaPredicted RBP11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 HLXQ14774 488 aaPredicted RBP11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 ST3GAL2Q16842 350 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 LHFPL5Q8TAF8 219 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 PRDM6Q9NQX0 595 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 SLC17A5Q9NRA2 495 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 SIRT5Q9NXA8 310 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 TRIP12Q14669 1992 aaPredicted RBP11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 SLC17A2O00624 439 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 FAM27D1Q5T7N8 215 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 SARGQ9BW04 601 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 CROCCQ5TZA2 2017 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 SUB1P53999 127 aaKnown RBP eCLIP11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 TAS2R45P59539 299 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 RNF165Q6ZSG1 346 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 MUC15Q8N387 334 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 SPICQ8N5J4 248 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 OR10X1Q8NGY0 326 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 CXorf58Q96LI9 332 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 TMEM70Q9BUB7 260 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 DLL4Q9NR61 685 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 LAMP3Q9UQV4 416 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 ALG1L2C9J202 215 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 RAB27BO00194 218 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 DEFA4P12838 97 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 COX5AP20674 150 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 PCMT1P22061 227 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 ZDHHC22Q8N966 263 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 TRAPPC1Q9Y5R8 145 aa11.86□□□□□ -0.51
RAPGEF1-201ENST00000372189 SOX15O60248 233 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 DDTP30046 118 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 KCNJ3P48549 501 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 ZNF66Q6ZN08 573 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 NUBPLQ8TB37 319 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 APOBEC3DQ96AK3 386 aaPredicted RBP11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 RAB37Q96AX2 223 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 SLC35E1Q96K37 410 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 DERL1Q9BUN8 251 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 NEU3Q9UQ49 428 aa11.85□□□□□ -0.51
RAPGEF1-201ENST00000372189 RCL1Q9Y2P8 373 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms