RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 CLEC2AQ6UVW9 174 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 C5orf46Q6UWT4 87 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 SDR9C7Q8NEX9 313 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 OR4K13Q8NH42 304 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 ZNF587Q96SQ5 575 aaPredicted RBP12.8□□□□□ -0.36
LMO4-201ENST00000370542 SMCO4Q9NRQ5 59 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 IER3IP1Q9Y5U9 82 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 ATP23Q9Y6H3 246 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 TMEM272A0A1B0GTI8 110 aa12.79□□□□□ -0.36
LMO4-201ENST00000370542 C1orf196B1AJZ1 125 aa12.79□□□□□ -0.36
LMO4-201ENST00000370542 VWC2LB2RUY7 222 aa12.79□□□□□ -0.36
LMO4-201ENST00000370542 ZNF587BE7ETH6 402 aa12.79□□□□□ -0.36
LMO4-201ENST00000370542 F5H0A9 414 aaPredicted RBP12.79□□□□□ -0.36
LMO4-201ENST00000370542 OR2T1O43869 369 aa12.79□□□□□ -0.36
LMO4-201ENST00000370542 UPK3AO75631 287 aa12.79□□□□□ -0.36
LMO4-201ENST00000370542 AHSA1O95433 338 aa12.79□□□□□ -0.36
LMO4-201ENST00000370542 IGKV3-15P01624 115 aa12.79□□□□□ -0.36
LMO4-201ENST00000370542 BDKRB2P30411 391 aa12.79□□□□□ -0.36
LMO4-201ENST00000370542 RPL4P36578 427 aaKnown RBP12.79□□□□□ -0.36
LMO4-201ENST00000370542 PSMB10P40306 273 aa12.79□□□□□ -0.36
LMO4-201ENST00000370542 POLR2GP62487 172 aaKnown RBP eCLIP12.79□□□□□ -0.36
LMO4-201ENST00000370542 PJVKQ0ZLH3 352 aa12.79□□□□□ -0.36
LMO4-201ENST00000370542 PEA15Q15121 130 aa12.79□□□□□ -0.36
LMO4-201ENST00000370542 C2orf68Q2NKX9 166 aa12.79□□□□□ -0.36
LMO4-201ENST00000370542 ALG10BQ5I7T1 473 aa12.79□□□□□ -0.36
LMO4-201ENST00000370542 LYG2Q86SG7 212 aa12.79□□□□□ -0.36
LMO4-201ENST00000370542 ZNF525Q8N782 197 aa12.79□□□□□ -0.36
LMO4-201ENST00000370542 NPEPL1Q8NDH3 523 aa12.79□□□□□ -0.36
LMO4-201ENST00000370542 RGP1Q92546 391 aaPredicted RBP12.79□□□□□ -0.36
LMO4-201ENST00000370542 KTI12Q96EK9 354 aaPredicted RBP12.79□□□□□ -0.36
LMO4-201ENST00000370542 PHB2Q99623 299 aa12.79□□□□□ -0.36
LMO4-201ENST00000370542 IGKV1D-42A0A075B6H8 117 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 TRAV18A0A075B6X5 111 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 TRBV6-7A0A0A0MS04 114 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 TEX13DA0A0J9YY54 714 aaPredicted RBP12.78□□□□□ -0.36
LMO4-201ENST00000370542 TVP23AA6NH52 213 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 WRBO00258 174 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 KCNAB3O43448 404 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 CYB5AP00167 134 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 GYPBP06028 91 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 ACHEP22303 614 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 PMELP40967 661 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 CX3CR1P49238 355 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 TAF13Q15543 124 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 EFNB3Q15768 340 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 LIPNQ5VXI9 398 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 FAAP20Q6NZ36 180 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 KLHL24Q6TFL4 600 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 SLC25A42Q86VD7 318 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 JAZF1Q86VZ6 243 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 ADPRHL1Q8NDY3 354 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 OR1S2Q8NGQ3 325 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 LIPHQ8WWY8 451 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 ASB17Q8WXJ9 295 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 FAM168AQ92567 244 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 GCDHQ92947 438 aaPredicted RBP12.78□□□□□ -0.36
LMO4-201ENST00000370542 OXGR1Q96P68 337 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 ALG12Q9BV10 488 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 EGLN1Q9GZT9 426 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 YAE1D1Q9NRH1 226 aa12.78□□□□□ -0.36
LMO4-201ENST00000370542 NOP16Q9Y3C1 178 aaKnown RBP12.78□□□□□ -0.36
LMO4-201ENST00000370542 MALRD1Q5VYJ5 2156 aa12.77□□□□□ -0.36
LMO4-201ENST00000370542 A0A0B4J2A0 478 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 TAAR5O14804 337 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 TXNDC12O95881 172 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 CD37P11049 281 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 NAT2P11245 290 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 ZNF43P17038 809 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 ADRA2CP18825 462 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 FUT1P19526 365 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 CLDN12P56749 244 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 FHL1Q13642 323 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 SMCO1Q147U7 214 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 BAP18Q8IXM2 172 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 ZNF561Q8N587 486 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 ZNF676Q8N7Q3 588 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 MITD1Q8WV92 249 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 TAAR8Q969N4 342 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 MCHR2Q969V1 340 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 ALKBH3Q96Q83 286 aaPredicted RBP12.77□□□□□ -0.37
LMO4-201ENST00000370542 NMES1Q9C002 83 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 OR51M1Q9H341 326 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 PLK3Q9H4B4 646 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 TUBA4BQ9H853 241 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 CKLFQ9UBR5 152 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 SHPKQ9UHJ6 478 aa12.77□□□□□ -0.37
LMO4-201ENST00000370542 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.77□□□□□ -0.37
LMO4-201ENST00000370542 A0A087WUJ7 227 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 OR4C45A6NMZ5 311 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 ZNF736B4DX44 427 aaPredicted RBP12.76□□□□□ -0.37
LMO4-201ENST00000370542 B9A039 149 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 MS4A18H0YCH9 400 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 NDUFS8O00217 210 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 GPR31O00270 319 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 TRAF3IP2O43734 574 aaPredicted RBP12.76□□□□□ -0.37
LMO4-201ENST00000370542 CRYAAP02489 173 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 CD3DP04234 171 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 AMY2AP04746 511 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 FABP1P07148 127 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 CECR9P0C854 216 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms