RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 NDUFB3O43676 98 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 HTR3BO95264 441 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 AMY2BP19961 511 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 IL13RA2Q14627 380 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 SLC22A6Q4U2R8 563 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 LRRC10Q5BKY1 277 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 NHLRC3Q5JS37 347 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 FAM166AQ6J272 317 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 ZNF841Q6ZN19 808 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 LINC00596Q86U02 117 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 BIVMQ86UB2 503 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 CD177Q8N6Q3 437 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 FAM234AQ9H0X4 552 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 POLR3KQ9Y2Y1 108 aaPredicted RBP12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 IFITM5A6NNB3 132 aa12.93□□□□□ -0.34
PRPF38B-202ENST00000370022 DVL1O14640 695 aa12.93□□□□□ -0.34
PRPF38B-202ENST00000370022 SH2D1BO14796 132 aa12.93□□□□□ -0.34
PRPF38B-202ENST00000370022 BPNT1O95861 308 aa12.93□□□□□ -0.34
PRPF38B-202ENST00000370022 HAND1O96004 215 aa12.93□□□□□ -0.34
PRPF38B-202ENST00000370022 MSMBP08118 114 aa12.93□□□□□ -0.34
PRPF38B-202ENST00000370022 SERPINA2P20848 420 aa12.93□□□□□ -0.34
PRPF38B-202ENST00000370022 SDC2P34741 201 aa12.93□□□□□ -0.34
PRPF38B-202ENST00000370022 RAB11BQ15907 218 aa12.93□□□□□ -0.34
PRPF38B-202ENST00000370022 CD276Q5ZPR3 534 aa12.93□□□□□ -0.34
PRPF38B-202ENST00000370022 WDR25Q64LD2 544 aaPredicted RBP12.93□□□□□ -0.34
PRPF38B-202ENST00000370022 FAM216BQ8N7L0 139 aa12.93□□□□□ -0.34
PRPF38B-202ENST00000370022 CHST4Q8NCG5 386 aa12.93□□□□□ -0.34
PRPF38B-202ENST00000370022 MSI2Q96DH6 328 aaKnown RBP12.93□□□□□ -0.34
PRPF38B-202ENST00000370022 C1orf147Q96MC9 270 aaPredicted RBP12.93□□□□□ -0.34
PRPF38B-202ENST00000370022 STEAP1Q9UHE8 339 aa12.93□□□□□ -0.34
PRPF38B-202ENST00000370022 CR1P17927 2039 aa12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 PPIAL4CA0A0B4J2A2 164 aa12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 NOTOA8MTQ0 251 aa12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 AIPO00170 330 aa12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 TMEM127O75204 238 aa12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 GABARAPO95166 117 aa12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 ECDO95905 644 aaPredicted RBP12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 ARSBP15848 533 aa12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 LMO1P25800 156 aa12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 CAV3P56539 151 aa12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 SEC61A1P61619 476 aaKnown RBP12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 OR10K1Q8NGX5 313 aa12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 KCNG3Q8TAE7 436 aa12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 SLC25A28Q96A46 364 aa12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 POM121Q96HA1 1249 aa12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 RNF167Q9H6Y7 350 aa12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 IL36RNQ9UBH0 155 aa12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 SLC25A10Q9UBX3 287 aaPredicted RBP12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 OR5V1Q9UGF6 321 aa12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 ST3GAL6Q9Y274 331 aa12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 MAB21L2Q9Y586 359 aa12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 ZNF469Q96JG9 3925 aaPredicted RBP12.92□□□□□ -0.34
PRPF38B-202ENST00000370022 TRAV20A0A0B4J274 112 aa12.91□□□□□ -0.34
PRPF38B-202ENST00000370022 CD5LO43866 347 aa12.91□□□□□ -0.34
PRPF38B-202ENST00000370022 CALCBP10092 127 aa12.91□□□□□ -0.34
PRPF38B-202ENST00000370022 RBM11P57052 281 aaKnown RBP12.91□□□□□ -0.34
PRPF38B-202ENST00000370022 OR10A3P58181 314 aa12.91□□□□□ -0.34
PRPF38B-202ENST00000370022 COL10A1Q03692 680 aa12.91□□□□□ -0.34
PRPF38B-202ENST00000370022 IKZF1Q13422 519 aa12.91□□□□□ -0.34
PRPF38B-202ENST00000370022 MPV17LQ2QL34 196 aa12.91□□□□□ -0.34
PRPF38B-202ENST00000370022 GPR107Q5VW38 600 aa12.91□□□□□ -0.34
PRPF38B-202ENST00000370022 SLC16A12Q6ZSM3 486 aa12.91□□□□□ -0.34
PRPF38B-202ENST00000370022 OR2W3Q7Z3T1 314 aa12.91□□□□□ -0.34
PRPF38B-202ENST00000370022 CROCCP3Q8IVE0 287 aa12.91□□□□□ -0.34
PRPF38B-202ENST00000370022 ZNRF1Q8ND25 227 aa12.91□□□□□ -0.34
PRPF38B-202ENST00000370022 PPP1R35Q8TAP8 253 aa12.91□□□□□ -0.34
PRPF38B-202ENST00000370022 SNX22Q96L94 193 aa12.91□□□□□ -0.34
PRPF38B-202ENST00000370022 A0A1B0GW55 424 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 FAM90A10PA6NDY2 464 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 FAM90A18PA6NE21 464 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 FAM90A16PA6NEW6 464 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 FAM90A20PA6NIJ5 464 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 FAM90A8PA6NJQ4 464 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 FAM90A7PA6NKC0 464 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 FAM90A22PA8MWA6 464 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 KIAA1324LA8MWY0 1029 aaPredicted RBP12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 FAM90A12PA8MX19 464 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 FAM90A5PA8MXJ8 464 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 FAM90A23PA8MXZ1 464 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 H3BUI4 141 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 K7N7A8 449 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 DEGS1O15121 323 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 CRTAPO75718 401 aaPredicted RBP12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 TGFAP01135 160 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 IL1AP01583 271 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 FAM90A15PP0C7V4 464 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 FAM90A13PP0C7W8 464 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 FAM90A14PP0C7W9 464 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 FAM90A24PP0C7X0 464 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 DUX4L2P0CJ85 424 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 DUX4L3P0CJ86 424 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 DUX4L4P0CJ87 422 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 DUX4L5P0CJ88 424 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 DUX4L6P0CJ89 424 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 DUX4L7P0CJ90 424 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 VSIG8P0DPA2 414 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 ZNF44P15621 663 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 MGMTP16455 207 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 GATA3P23771 443 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 ZFP36P26651 326 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms