RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 RAB12Q6IQ22 244 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 OR2W3Q7Z3T1 314 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 FTMTQ8N4E7 242 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 SMIM4Q8WVI0 70 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 GPER1Q99527 375 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 TBCCD1Q9NVR7 557 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 MGAT4CQ9UBM8 478 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 RAB22AQ9UL26 194 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 ZNF835Q9Y2P0 537 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 AMDHD2Q9Y303 409 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 HIVEP1P15822 2718 aa7.48□□□□□ -1.21
TPM3-213ENST00000368545 ATMQ13315 3056 aa7.47□□□□□ -1.21
TPM3-213ENST00000368545 HIVEP3Q5T1R4 2406 aa7.47□□□□□ -1.21
TPM3-213ENST00000368545 IGKV1-9A0A0C4DH69 117 aa7.47□□□□□ -1.21
TPM3-213ENST00000368545 METTL21EPA6NDL7 271 aa7.47□□□□□ -1.21
TPM3-213ENST00000368545 GGT3PA6NGU5 568 aa7.47□□□□□ -1.21
TPM3-213ENST00000368545 GABARAPH6UMI1 98 aa7.47□□□□□ -1.21
TPM3-213ENST00000368545 AP4M1O00189 453 aa7.47□□□□□ -1.21
TPM3-213ENST00000368545 IL6RP08887 468 aaPredicted RBP7.47□□□□□ -1.21
TPM3-213ENST00000368545 CBR1P16152 277 aa7.47□□□□□ -1.21
TPM3-213ENST00000368545 PRKACBP22694 351 aa7.47□□□□□ -1.21
TPM3-213ENST00000368545 OPRM1P35372 400 aa7.47□□□□□ -1.21
TPM3-213ENST00000368545 TAS2R20P59543 309 aa7.47□□□□□ -1.21
TPM3-213ENST00000368545 KISS1Q15726 138 aa7.47□□□□□ -1.21
TPM3-213ENST00000368545 UBE2V2Q15819 145 aa7.47□□□□□ -1.21
TPM3-213ENST00000368545 TMEM88Q6PEY1 159 aa7.47□□□□□ -1.21
TPM3-213ENST00000368545 MRPL21Q7Z2W9 205 aaKnown RBP7.47□□□□□ -1.21
TPM3-213ENST00000368545 CSNK2A3Q8NEV1 391 aa7.47□□□□□ -1.21
TPM3-213ENST00000368545 THAP7Q9BT49 309 aaPredicted RBP7.47□□□□□ -1.21
TPM3-213ENST00000368545 SLC22A4Q9H015 551 aa7.47□□□□□ -1.21
TPM3-213ENST00000368545 PIGMQ9H3S5 423 aa7.47□□□□□ -1.21
TPM3-213ENST00000368545 COQ3Q9NZJ6 369 aa7.47□□□□□ -1.21
TPM3-213ENST00000368545 MRPS28Q9Y2Q9 187 aaKnown RBP7.47□□□□□ -1.21
TPM3-213ENST00000368545 RTTNQ86VV8 2226 aa7.47□□□□□ -1.21
TPM3-213ENST00000368545 PDZD2O15018 2839 aa7.47□□□□□ -1.21
TPM3-213ENST00000368545 TRGV8A0A0C4DH27 118 aa7.46□□□□□ -1.21
TPM3-213ENST00000368545 PLATP00750 562 aa7.46□□□□□ -1.21
TPM3-213ENST00000368545 NRASP01111 189 aa7.46□□□□□ -1.21
TPM3-213ENST00000368545 IGKV3-15P01624 115 aa7.46□□□□□ -1.21
TPM3-213ENST00000368545 ALDH3B1P43353 468 aa7.46□□□□□ -1.21
TPM3-213ENST00000368545 PTH2RP49190 550 aa7.46□□□□□ -1.21
TPM3-213ENST00000368545 TNK1Q13470 666 aa7.46□□□□□ -1.21
TPM3-213ENST00000368545 GK2Q14410 553 aaPredicted RBP7.46□□□□□ -1.21
TPM3-213ENST00000368545 TAB1Q15750 504 aa7.46□□□□□ -1.21
TPM3-213ENST00000368545 ZNF674Q2M3X9 581 aa7.46□□□□□ -1.21
TPM3-213ENST00000368545 ZNF57Q68EA5 555 aaPredicted RBP7.46□□□□□ -1.21
TPM3-213ENST00000368545 UNQ6126/PRO20091Q6UXV3 157 aa7.46□□□□□ -1.21
TPM3-213ENST00000368545 BHLHA15Q7RTS1 189 aaPredicted RBP7.46□□□□□ -1.21
TPM3-213ENST00000368545 ANGPTL5Q86XS5 388 aa7.46□□□□□ -1.21
TPM3-213ENST00000368545 DOLPP1Q86YN1 238 aa7.46□□□□□ -1.21
TPM3-213ENST00000368545 ATG5Q9H1Y0 275 aa7.46□□□□□ -1.21
TPM3-213ENST00000368545 OPN3Q9H1Y3 402 aaPredicted RBP7.46□□□□□ -1.21
TPM3-213ENST00000368545 CDH20Q9HBT6 801 aa7.46□□□□□ -1.21
TPM3-213ENST00000368545 FAIMQ9NVQ4 179 aa7.46□□□□□ -1.21
TPM3-213ENST00000368545 EIF3KQ9UBQ5 218 aaKnown RBP7.46□□□□□ -1.21
TPM3-213ENST00000368545 MRPS7Q9Y2R9 242 aaKnown RBP7.46□□□□□ -1.21
TPM3-213ENST00000368545 PRRC2CQ9Y520 2896 aaKnown RBP7.46□□□□□ -1.22
TPM3-213ENST00000368545 MYO7BQ6PIF6 2116 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 FAM90A8PA6NJQ4 464 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 TMEM14DPA8MWL7 114 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 EEF1E1O43324 174 aaKnown RBP7.46□□□□□ -1.22
TPM3-213ENST00000368545 GMDSO60547 372 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 FAM90A13PP0C7W8 464 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 FAM90A24PP0C7X0 464 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 CCL2P13500 99 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 EFNB2P52799 333 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 AP3S2P59780 193 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 KRTAP10-9P60411 292 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 PMPCAQ10713 525 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 MLANAQ16655 118 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 GLIPR1L1Q6UWM5 242 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 MOB3CQ70IA8 216 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 ZNF101Q8IZC7 436 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 TOMM5Q8N4H5 51 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 KCNG3Q8TAE7 436 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 FCAMRQ8WWV6 532 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 DEDD2Q8WXF8 326 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 YIPF5Q969M3 257 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 PIGTQ969N2 578 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 S100A13Q99584 98 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 CITED2Q99967 270 aaPredicted RBP7.46□□□□□ -1.22
TPM3-213ENST00000368545 C7orf50Q9BRJ6 194 aaKnown RBP7.46□□□□□ -1.22
TPM3-213ENST00000368545 CST11Q9H112 138 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 SLC7A11Q9UPY5 501 aa7.46□□□□□ -1.22
TPM3-213ENST00000368545 NF1P21359 2839 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 OR5H1A6NKK0 313 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 CENPXA8MT69 81 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 DIRC3C9JPN6 131 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 LYRM1O43325 122 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 ECDO95905 644 aaPredicted RBP7.45□□□□□ -1.22
TPM3-213ENST00000368545 PSMB1P20618 241 aaKnown RBP7.45□□□□□ -1.22
TPM3-213ENST00000368545 TUBG1P23258 451 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 IL32P24001 234 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 WNT5AP41221 380 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 PTGFRP43088 359 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 OR3A4PP47883 348 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 RBP2P50120 134 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 IDH3GP51553 393 aaPredicted RBP7.45□□□□□ -1.22
TPM3-213ENST00000368545 QRFPP83859 136 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 DGCR2P98153 550 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms