RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 CD177Q8N6Q3 437 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 OR52N4Q8NGI2 321 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 ST8SIA4Q92187 359 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 RBFOX1Q9NWB1 397 aaKnown RBP12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 IL36RNQ9UBH0 155 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 OPN4Q9UHM6 478 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 MAB21L2Q9Y586 359 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 LOC105371242A0A075B767 164 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 NKX6-3A6NJ46 265 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 RFPL4AA6NLU0 287 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 RFPL4AL1F8VTS6 287 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 CLEC2LP0C7M8 214 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 CALCBP10092 127 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 IGFBP3P17936 291 aaPredicted RBP12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 ADRA2CP18825 462 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 NPY4RP50391 375 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 ZP1P60852 638 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 KISS1Q15726 138 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 FAM27D1Q5T7N8 215 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 TMEM91Q6ZNR0 172 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 GDPGP1Q6ZNW5 385 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 RAB40AQ8WXH6 277 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 POM121Q96HA1 1249 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 KCTD7Q96MP8 289 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 DERL3Q96Q80 235 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 DNTTIP1Q9H147 329 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 C7orf69Q9H7B7 122 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 OR14J1Q9UGF5 321 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 GSTK1Q9Y2Q3 226 aa12.5□□□□□ -0.41
SMPDL3A-201ENST00000368440 MXRA5Q9NR99 2828 aa12.49□□□□□ -0.41
SMPDL3A-201ENST00000368440 WNK2Q9Y3S1 2297 aa12.49□□□□□ -0.41
SMPDL3A-201ENST00000368440 TRDV1A0A1B0GX56 115 aa12.49□□□□□ -0.41
SMPDL3A-201ENST00000368440 ZNF879B4DU55 563 aa12.49□□□□□ -0.41
SMPDL3A-201ENST00000368440 SIGLEC5O15389 551 aa12.49□□□□□ -0.41
SMPDL3A-201ENST00000368440 PIN1P1O15428 100 aa12.49□□□□□ -0.41
SMPDL3A-201ENST00000368440 RPS19P39019 145 aaKnown RBP12.49□□□□□ -0.41
SMPDL3A-201ENST00000368440 RIPPLY3P57055 190 aa12.49□□□□□ -0.41
SMPDL3A-201ENST00000368440 IL13RA1P78552 427 aa12.49□□□□□ -0.41
SMPDL3A-201ENST00000368440 GPR50Q13585 617 aa12.49□□□□□ -0.41
SMPDL3A-201ENST00000368440 CEACAM19Q7Z692 300 aa12.49□□□□□ -0.41
SMPDL3A-201ENST00000368440 MKXQ8IYA7 352 aa12.49□□□□□ -0.41
SMPDL3A-201ENST00000368440 ZNRF1Q8ND25 227 aa12.49□□□□□ -0.41
SMPDL3A-201ENST00000368440 NUDT16L1Q9BRJ7 211 aaKnown RBP12.49□□□□□ -0.41
SMPDL3A-201ENST00000368440 ELL3Q9HB65 397 aaPredicted RBP12.49□□□□□ -0.41
SMPDL3A-201ENST00000368440 LPAR3Q9UBY5 353 aa12.49□□□□□ -0.41
SMPDL3A-201ENST00000368440 J3QLI3 93 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 NDUFB3O43676 98 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 CLPXO76031 633 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 HNF1AP20823 631 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 GATA3P23771 443 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 SDC2P34741 201 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 CD200R1LQ6Q8B3 271 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 BTN2A1Q7KYR7 527 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 EMG1Q92979 244 aaKnown RBP12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 SDSLQ96GA7 329 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 NEK6Q9HC98 313 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 NOX4Q9NPH5 578 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 KNG1P01042 644 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 SFTPBP07988 381 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 FSTP19883 344 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 CALRP27797 417 aaKnown RBP12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 PRDX2P32119 198 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 SNU13P55769 128 aaKnown RBP12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 CAV3P56539 151 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 PPP3R1P63098 170 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 PAX8Q06710 450 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 ACSM3Q53FZ2 586 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 DDI2Q5TDH0 399 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 C1QL2Q7Z5L3 287 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 TBC1D15Q8TC07 691 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 MED30Q96HR3 178 aa12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 C6orf62Q9GZU0 229 aaPredicted RBP12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 SLC25A10Q9UBX3 287 aaPredicted RBP12.48□□□□□ -0.41
SMPDL3A-201ENST00000368440 KIR2DS1A0A191URI9 304 aa12.47□□□□□ -0.41
SMPDL3A-201ENST00000368440 KDM4BO94953 1096 aa12.47□□□□□ -0.41
SMPDL3A-201ENST00000368440 CYB5AP00167 134 aa12.47□□□□□ -0.41
SMPDL3A-201ENST00000368440 SRD5A1P18405 259 aa12.47□□□□□ -0.41
SMPDL3A-201ENST00000368440 BDKRB2P30411 391 aa12.47□□□□□ -0.41
SMPDL3A-201ENST00000368440 LRRC10Q5BKY1 277 aa12.47□□□□□ -0.41
SMPDL3A-201ENST00000368440 TMEM185AQ8NFB2 350 aa12.47□□□□□ -0.41
SMPDL3A-201ENST00000368440 MCFD2Q8NI22 146 aa12.47□□□□□ -0.41
SMPDL3A-201ENST00000368440 GPER1Q99527 375 aa12.47□□□□□ -0.41
SMPDL3A-201ENST00000368440 SLIRPQ9GZT3 109 aaKnown RBP12.47□□□□□ -0.41
SMPDL3A-201ENST00000368440 PPIL3Q9H2H8 161 aaKnown RBP12.47□□□□□ -0.41
SMPDL3A-201ENST00000368440 TMEM138Q9NPI0 162 aa12.47□□□□□ -0.41
SMPDL3A-201ENST00000368440 RPUSD1Q9UJJ7 312 aaKnown RBP12.47□□□□□ -0.41
SMPDL3A-201ENST00000368440 SHISA3A0PJX4 238 aa12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 MAGEB3O15480 346 aa12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 ENSAO43768 121 aaKnown RBP12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 SC5DO75845 299 aa12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 ALDOBP05062 364 aa12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 FAM157CP0CG43 387 aa12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 TMEM225BP0DP42 221 aa12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 PRKACAP17612 351 aa12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 DUSP1P28562 367 aa12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 FGF9P31371 208 aaPredicted RBP12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 SOX6P35712 828 aa12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 SRP14P37108 136 aaKnown RBP12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 OR3A4PP47883 348 aa12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 CD276Q5ZPR3 534 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms